data_4DQG # _model_server_result.job_id SrDCuSYsWFtbdiMay_DirQ _model_server_result.datetime_utc '2024-11-14 20:42:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dqg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4DQG # _exptl.entry_id 4DQG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 75.07 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-HYDROXYGUANIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DQG _cell.length_a 51.472 _cell.length_b 58.168 _cell.length_c 61.043 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DQG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 16 A CYS 16 1_555 A SG CYS 38 A CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf2 B SG CYS 16 B CYS 16 1_555 B SG CYS 38 B CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C H5 N3 O' _chem_comp.formula_weight 75.07 _chem_comp.id HGU _chem_comp.mon_nstd_flag . _chem_comp.name N-HYDROXYGUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O N HGU sing 148 n n O HO HGU sing 149 n n N C HGU sing 150 n n N HN HGU sing 151 n n C NH1 HGU doub 152 n n C NH2 HGU sing 153 n n NH1 HN1 HGU sing 154 n n NH2 HN21 HGU sing 155 n n NH2 HN22 HGU sing 156 n n # _atom_sites.entry_id 4DQG _atom_sites.fract_transf_matrix[1][1] 0.019428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017192 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HGU A 1 101 2 HGU HGU . D 3 GOL A 1 102 3 GOL GOL . E 3 GOL A 1 103 6 GOL GOL . F 4 OXY A 1 104 7 OXY OXY . G 3 GOL B 1 101 1 GOL GOL . H 5 ACT B 1 102 4 ACT ACT . I 6 PO4 B 1 103 5 PO4 PO4 . J 7 HOH A 1 201 5 HOH HOH . J 7 HOH A 2 202 6 HOH HOH . J 7 HOH A 3 203 7 HOH HOH . J 7 HOH A 4 204 8 HOH HOH . J 7 HOH A 5 205 9 HOH HOH . J 7 HOH A 6 206 10 HOH HOH . J 7 HOH A 7 207 12 HOH HOH . J 7 HOH A 8 208 13 HOH HOH . J 7 HOH A 9 209 14 HOH HOH . J 7 HOH A 10 210 15 HOH HOH . J 7 HOH A 11 211 18 HOH HOH . K 7 HOH B 1 201 2 HOH HOH . K 7 HOH B 2 202 3 HOH HOH . K 7 HOH B 3 203 11 HOH HOH . K 7 HOH B 4 204 16 HOH HOH . K 7 HOH B 5 205 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O HGU . . . C 2 -28.121 1.587 -21.254 1 47.63 ? O HGU 101 A 1 HETATM 2 N N HGU . . . C 2 -28.737 2.394 -22.219 1 47.36 ? N HGU 101 A 1 HETATM 3 C C HGU . . . C 2 -29.985 2.832 -22.058 1 43.85 ? C HGU 101 A 1 HETATM 4 N NH1 HGU . . . C 2 -30.593 2.745 -20.967 1 41.74 ? NH1 HGU 101 A 1 HETATM 5 N NH2 HGU . . . C 2 -30.656 3.298 -23.109 1 44.46 ? NH2 HGU 101 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 432 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #