data_4DQH # _model_server_result.job_id YPFBMVxxLXlLYLqP_h_C8w _model_server_result.datetime_utc '2024-11-14 17:33:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4DQH # _exptl.entry_id 4DQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DQH _cell.length_a 50.706 _cell.length_b 57.982 _cell.length_c 61.546 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 4DQH _atom_sites.fract_transf_matrix[1][1] 0.019722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017247 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 B 1 101 200 017 017 . D 3 GOL B 1 102 1 GOL GOL . E 4 HOH A 1 101 3 HOH HOH . E 4 HOH A 2 102 5 HOH HOH . E 4 HOH A 3 103 11 HOH HOH . E 4 HOH A 4 104 12 HOH HOH . E 4 HOH A 5 105 13 HOH HOH . E 4 HOH A 6 106 14 HOH HOH . E 4 HOH A 7 107 15 HOH HOH . E 4 HOH A 8 108 18 HOH HOH . E 4 HOH A 9 109 20 HOH HOH . E 4 HOH A 10 110 21 HOH HOH . E 4 HOH A 11 111 22 HOH HOH . E 4 HOH A 12 112 26 HOH HOH . E 4 HOH A 13 113 28 HOH HOH . E 4 HOH A 14 114 30 HOH HOH . E 4 HOH A 15 115 33 HOH HOH . E 4 HOH A 16 116 34 HOH HOH . E 4 HOH A 17 117 35 HOH HOH . E 4 HOH A 18 118 43 HOH HOH . E 4 HOH A 19 119 44 HOH HOH . E 4 HOH A 20 120 46 HOH HOH . E 4 HOH A 21 121 47 HOH HOH . E 4 HOH A 22 122 48 HOH HOH . E 4 HOH A 23 123 49 HOH HOH . E 4 HOH A 24 124 50 HOH HOH . E 4 HOH A 25 125 53 HOH HOH . E 4 HOH A 26 126 54 HOH HOH . E 4 HOH A 27 127 55 HOH HOH . E 4 HOH A 28 128 56 HOH HOH . E 4 HOH A 29 129 57 HOH HOH . E 4 HOH A 30 130 58 HOH HOH . E 4 HOH A 31 131 59 HOH HOH . E 4 HOH A 32 132 60 HOH HOH . E 4 HOH A 33 133 61 HOH HOH . E 4 HOH A 34 134 62 HOH HOH . E 4 HOH A 35 135 63 HOH HOH . E 4 HOH A 36 136 64 HOH HOH . E 4 HOH A 37 137 65 HOH HOH . E 4 HOH A 38 138 66 HOH HOH . E 4 HOH A 39 139 67 HOH HOH . E 4 HOH A 40 140 68 HOH HOH . E 4 HOH A 41 141 71 HOH HOH . E 4 HOH A 42 142 72 HOH HOH . E 4 HOH A 43 143 73 HOH HOH . E 4 HOH A 44 144 74 HOH HOH . E 4 HOH A 45 145 75 HOH HOH . E 4 HOH A 46 146 87 HOH HOH . E 4 HOH A 47 147 88 HOH HOH . E 4 HOH A 48 148 89 HOH HOH . E 4 HOH A 49 149 90 HOH HOH . E 4 HOH A 50 150 91 HOH HOH . E 4 HOH A 51 151 92 HOH HOH . E 4 HOH A 52 152 93 HOH HOH . E 4 HOH A 53 153 94 HOH HOH . E 4 HOH A 54 154 95 HOH HOH . E 4 HOH A 55 155 96 HOH HOH . E 4 HOH A 56 156 97 HOH HOH . E 4 HOH A 57 157 98 HOH HOH . E 4 HOH A 58 158 100 HOH HOH . E 4 HOH A 59 159 101 HOH HOH . E 4 HOH A 60 160 102 HOH HOH . E 4 HOH A 61 161 103 HOH HOH . E 4 HOH A 62 162 104 HOH HOH . E 4 HOH A 63 163 105 HOH HOH . E 4 HOH A 64 164 106 HOH HOH . E 4 HOH A 65 165 126 HOH HOH . E 4 HOH A 66 166 127 HOH HOH . E 4 HOH A 67 167 128 HOH HOH . E 4 HOH A 68 168 129 HOH HOH . E 4 HOH A 69 169 130 HOH HOH . E 4 HOH A 70 170 131 HOH HOH . E 4 HOH A 71 171 132 HOH HOH . E 4 HOH A 72 172 133 HOH HOH . E 4 HOH A 73 173 134 HOH HOH . E 4 HOH A 74 174 135 HOH HOH . E 4 HOH A 75 175 136 HOH HOH . E 4 HOH A 76 176 137 HOH HOH . F 4 HOH B 1 201 1 HOH HOH . F 4 HOH B 2 202 2 HOH HOH . F 4 HOH B 3 203 4 HOH HOH . F 4 HOH B 4 204 6 HOH HOH . F 4 HOH B 5 205 7 HOH HOH . F 4 HOH B 6 206 8 HOH HOH . F 4 HOH B 7 207 9 HOH HOH . F 4 HOH B 8 208 10 HOH HOH . F 4 HOH B 9 209 16 HOH HOH . F 4 HOH B 10 210 17 HOH HOH . F 4 HOH B 11 211 19 HOH HOH . F 4 HOH B 12 212 23 HOH HOH . F 4 HOH B 13 213 24 HOH HOH . F 4 HOH B 14 214 25 HOH HOH . F 4 HOH B 15 215 27 HOH HOH . F 4 HOH B 16 216 29 HOH HOH . F 4 HOH B 17 217 31 HOH HOH . F 4 HOH B 18 218 32 HOH HOH . F 4 HOH B 19 219 36 HOH HOH . F 4 HOH B 20 220 37 HOH HOH . F 4 HOH B 21 221 38 HOH HOH . F 4 HOH B 22 222 39 HOH HOH . F 4 HOH B 23 223 40 HOH HOH . F 4 HOH B 24 224 41 HOH HOH . F 4 HOH B 25 225 42 HOH HOH . F 4 HOH B 26 226 45 HOH HOH . F 4 HOH B 27 227 51 HOH HOH . F 4 HOH B 28 228 52 HOH HOH . F 4 HOH B 29 229 69 HOH HOH . F 4 HOH B 30 230 70 HOH HOH . F 4 HOH B 31 231 76 HOH HOH . F 4 HOH B 32 232 77 HOH HOH . F 4 HOH B 33 233 78 HOH HOH . F 4 HOH B 34 234 79 HOH HOH . F 4 HOH B 35 235 80 HOH HOH . F 4 HOH B 36 236 81 HOH HOH . F 4 HOH B 37 237 82 HOH HOH . F 4 HOH B 38 238 83 HOH HOH . F 4 HOH B 39 239 84 HOH HOH . F 4 HOH B 40 240 85 HOH HOH . F 4 HOH B 41 241 86 HOH HOH . F 4 HOH B 42 242 99 HOH HOH . F 4 HOH B 43 243 107 HOH HOH . F 4 HOH B 44 244 108 HOH HOH . F 4 HOH B 45 245 109 HOH HOH . F 4 HOH B 46 246 110 HOH HOH . F 4 HOH B 47 247 111 HOH HOH . F 4 HOH B 48 248 112 HOH HOH . F 4 HOH B 49 249 113 HOH HOH . F 4 HOH B 50 250 114 HOH HOH . F 4 HOH B 51 251 115 HOH HOH . F 4 HOH B 52 252 116 HOH HOH . F 4 HOH B 53 253 117 HOH HOH . F 4 HOH B 54 254 118 HOH HOH . F 4 HOH B 55 255 119 HOH HOH . F 4 HOH B 56 256 120 HOH HOH . F 4 HOH B 57 257 121 HOH HOH . F 4 HOH B 58 258 122 HOH HOH . F 4 HOH B 59 259 123 HOH HOH . F 4 HOH B 60 260 124 HOH HOH . F 4 HOH B 61 261 125 HOH HOH . F 4 HOH B 62 262 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . . . C 2 14.604 35.429 18.431 1 35.37 ? N1 017 101 B 1 HETATM 2 C C2 017 . . . C 2 15.523 34.863 17.619 1 26.1 ? C2 017 101 B 1 HETATM 3 C C3 017 . . . C 2 16.537 35.586 16.962 1 26.33 ? C3 017 101 B 1 HETATM 4 C C4 017 . . . C 2 17.427 34.892 16.131 1 22.41 ? C4 017 101 B 1 HETATM 5 C C5 017 . . . C 2 17.269 33.513 15.965 1 21.36 ? C5 017 101 B 1 HETATM 6 C C6 017 . . . C 2 16.263 32.856 16.647 1 23.43 ? C6 017 101 B 1 HETATM 7 C C7 017 . . . C 2 15.391 33.519 17.458 1 25.95 ? C7 017 101 B 1 HETATM 8 S S8 017 . . . C 2 18.233 32.563 15.062 1 19.84 ? S8 017 101 B 1 HETATM 9 O O9 017 . . . C 2 17.467 31.531 14.471 1 21.79 ? O9 017 101 B 1 HETATM 10 O O10 017 . . . C 2 18.895 33.376 14.058 1 20.27 ? O10 017 101 B 1 HETATM 11 N N11 017 . . . C 2 19.421 31.874 15.961 1 20.47 ? N11 017 101 B 1 HETATM 12 C C12 017 . . . C 2 20.213 32.836 16.769 1 18.72 ? C12 017 101 B 1 HETATM 13 C C13 017 . . . C 2 21.722 32.539 16.737 1 19.74 ? C13 017 101 B 1 HETATM 14 C C14 017 . . . C 2 22.327 32.577 15.337 1 18.75 ? C14 017 101 B 1 HETATM 15 C C15 017 . . . C 2 22.501 33.5 17.66 1 20.54 ? C15 017 101 B 1 HETATM 16 C C16 017 . . . C 2 19.089 30.601 16.64 1 20.01 ? C16 017 101 B 1 HETATM 17 C C17 017 . . . C 2 19.973 29.492 16.051 1 20.77 ? C17 017 101 B 1 HETATM 18 O O18 017 . . . C 2 19.897 28.348 16.902 1 20.33 ? O18 017 101 B 1 HETATM 19 C C19 017 . . . C 2 19.593 29.096 14.616 1 20.48 ? C19 017 101 B 1 HETATM 20 N N20 017 . . . C 2 20.631 28.241 14.099 1 21.09 ? N20 017 101 B 1 HETATM 21 C C21 017 . . . C 2 21.507 28.591 13.159 1 20.05 ? C21 017 101 B 1 HETATM 22 O O22 017 . . . C 2 21.643 29.662 12.616 1 18.26 ? O22 017 101 B 1 HETATM 23 O O23 017 . . . C 2 22.403 27.522 12.859 1 19.87 ? O23 017 101 B 1 HETATM 24 C C24 017 . . . C 2 23.205 27.651 11.71 1 20.34 ? C24 017 101 B 1 HETATM 25 C C25 017 . . . C 2 24.525 27.01 12.131 1 19.37 ? C25 017 101 B 1 HETATM 26 O O26 017 . . . C 2 24.214 25.612 12.036 1 20.65 ? O26 017 101 B 1 HETATM 27 C C27 017 . . . C 2 23.289 25.366 10.979 1 20.92 ? C27 017 101 B 1 HETATM 28 O O28 017 . . . C 2 22.231 24.489 11.422 1 20.52 ? O28 017 101 B 1 HETATM 29 C C29 017 . . . C 2 20.998 25.203 11.513 1 20.93 ? C29 017 101 B 1 HETATM 30 C C30 017 . . . C 2 21.183 26.453 10.648 1 21.06 ? C30 017 101 B 1 HETATM 31 C C31 017 . . . C 2 22.679 26.715 10.636 1 20.65 ? C31 017 101 B 1 HETATM 32 C C32 017 . . . C 2 18.262 28.331 14.499 1 19.33 ? C32 017 101 B 1 HETATM 33 C C33 017 . . . C 2 17.982 26.584 12.681 1 21.45 ? C33 017 101 B 1 HETATM 34 C C34 017 . . . C 2 17.756 26.182 11.362 1 23.33 ? C34 017 101 B 1 HETATM 35 C C35 017 . . . C 2 17.488 27.141 10.395 1 22.75 ? C35 017 101 B 1 HETATM 36 C C36 017 . . . C 2 17.457 28.478 10.766 1 22.69 ? C36 017 101 B 1 HETATM 37 C C37 017 . . . C 2 17.703 28.888 12.087 1 23.17 ? C37 017 101 B 1 HETATM 38 C C38 017 . . . C 2 17.978 27.925 13.055 1 21.48 ? C38 017 101 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 38 #