data_4DUM
#
_model_server_result.job_id            RyQ-qj1ZNYIMUcWE0AMSpA 
_model_server_result.datetime_utc      '2024-12-23 06:48:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dum 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1001}' 
#
_entry.id    4DUM 
#
_exptl.entry_id    4DUM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              475.822 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DUM 
_cell.length_a            38.225 
_cell.length_b            58.766 
_cell.length_c            125.442 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H19 Cl N5 O5 P' 
_chem_comp.formula_weight    475.822 
_chem_comp.id                HLI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C1 HLI sing 159 n n 
C1 O5 HLI sing 160 n n 
C1 H1 HLI sing 161 n n 
C1 H1A HLI sing 162 n n 
C3 N1 HLI sing 163 n y 
N1 C4 HLI doub 164 n y 
C6 O1 HLI doub 165 n n 
O3 P1 HLI doub 166 n n 
C11 P1 HLI sing 167 n n 
P1 O2 HLI sing 168 n n 
P1 O4 HLI sing 169 n n 
C18 CL1 HLI sing 170 n n 
C3 C2 HLI doub 171 n y 
C6 C2 HLI sing 172 n n 
C2 N2 HLI sing 173 n y 
C4 N2 HLI sing 174 n y 
N2 C8 HLI sing 175 n n 
O2 HO2 HLI sing 176 n n 
N4 C3 HLI sing 177 n n 
C5 N3 HLI sing 178 n n 
N3 C6 HLI sing 179 n n 
N3 HN3 HLI sing 180 n n 
C4 C7 HLI sing 181 n n 
C5 N4 HLI doub 182 n n 
O4 HO4 HLI sing 183 n n 
N5 C5 HLI sing 184 n n 
C14 N5 HLI sing 185 n n 
O5 C15 HLI sing 186 n n 
C13 C7 HLI doub 187 n y 
C7 C9 HLI sing 188 n y 
C8 H8 HLI sing 189 n n 
C8 H8A HLI sing 190 n n 
C9 C10 HLI doub 191 n y 
C9 H9 HLI sing 192 n n 
C11 C10 HLI sing 193 n y 
C10 H10 HLI sing 194 n n 
C12 C11 HLI doub 195 n y 
C13 C12 HLI sing 196 n y 
C12 H12 HLI sing 197 n n 
C13 H13 HLI sing 198 n n 
C14 H14 HLI sing 199 n n 
C14 H14A HLI sing 200 n n 
C15 C16 HLI doub 201 n y 
C15 C20 HLI sing 202 n y 
C16 C17 HLI sing 203 n y 
C16 H16 HLI sing 204 n n 
C17 C18 HLI doub 205 n y 
C17 H17 HLI sing 206 n n 
C19 C18 HLI sing 207 n y 
C20 C19 HLI doub 208 n y 
C19 H19 HLI sing 209 n n 
C20 H20 HLI sing 210 n n 
C14 H14B HLI sing 211 n n 
N5 HN5 HLI sing 212 n n 
#
_atom_sites.entry_id                     4DUM 
_atom_sites.fract_transf_matrix[1][1]    0.026161 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017017 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HLI A 1 1001 1001 HLI HLI . 
C 3 EDO A 1 1002 1101 EDO EDO . 
D 3 EDO A 1 1003 1102 EDO EDO . 
E 4 HOH A 1 1101 1 HOH HOH . 
E 4 HOH A 2 1102 2 HOH HOH . 
E 4 HOH A 3 1103 3 HOH HOH . 
E 4 HOH A 4 1104 4 HOH HOH . 
E 4 HOH A 5 1105 5 HOH HOH . 
E 4 HOH A 6 1106 6 HOH HOH . 
E 4 HOH A 7 1107 7 HOH HOH . 
E 4 HOH A 8 1108 8 HOH HOH . 
E 4 HOH A 9 1109 10 HOH HOH . 
E 4 HOH A 10 1110 11 HOH HOH . 
E 4 HOH A 11 1111 12 HOH HOH . 
E 4 HOH A 12 1112 13 HOH HOH . 
E 4 HOH A 13 1113 14 HOH HOH . 
E 4 HOH A 14 1114 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HLI . . . B 2 -0.724 4.228 -23.175 1 41.18 ? C1 HLI 1001 A 1 
HETATM 2 N N1 HLI . . . B 2 0.504 0.4 -25.004 1 43.37 ? N1 HLI 1001 A 1 
HETATM 3 O O1 HLI . . . B 2 -3.075 2.953 -24.879 1 41.57 ? O1 HLI 1001 A 1 
HETATM 4 P P1 HLI . . . B 2 6.48 3.399 -24.407 1 50.74 ? P1 HLI 1001 A 1 
HETATM 5 CL CL1 HLI . . . B 2 -0.151 4.935 -16.575 1 41.8 ? CL1 HLI 1001 A 1 
HETATM 6 C C2 HLI . . . B 2 -1.304 1.581 -24.948 1 42.43 ? C2 HLI 1001 A 1 
HETATM 7 N N2 HLI . . . B 2 -0.271 2.389 -24.78 1 43.29 ? N2 HLI 1001 A 1 
HETATM 8 O O2 HLI . . . B 2 6.767 4.786 -23.97 1 52.53 ? O2 HLI 1001 A 1 
HETATM 9 C C3 HLI . . . B 2 -0.806 0.303 -25.088 1 42.22 ? C3 HLI 1001 A 1 
HETATM 10 N N3 HLI . . . B 2 -3.507 0.696 -25.188 1 43.37 ? N3 HLI 1001 A 1 
HETATM 11 O O3 HLI . . . B 2 7.117 3.28 -25.845 1 51.37 ? O3 HLI 1001 A 1 
HETATM 12 C C4 HLI . . . B 2 0.848 1.663 -24.815 1 44.14 ? C4 HLI 1001 A 1 
HETATM 13 N N4 HLI . . . B 2 -1.608 -0.752 -25.265 1 43.29 ? N4 HLI 1001 A 1 
HETATM 14 O O4 HLI . . . B 2 7.284 2.305 -23.491 1 51.27 ? O4 HLI 1001 A 1 
HETATM 15 C C5 HLI . . . B 2 -2.952 -0.604 -25.324 1 44.25 ? C5 HLI 1001 A 1 
HETATM 16 N N5 HLI . . . B 2 -3.747 -1.681 -25.512 1 43.42 ? N5 HLI 1001 A 1 
HETATM 17 O O5 HLI . . . B 2 0.46 4.038 -22.397 1 41.54 ? O5 HLI 1001 A 1 
HETATM 18 C C6 HLI . . . B 2 -2.659 1.801 -24.997 1 42.49 ? C6 HLI 1001 A 1 
HETATM 19 C C7 HLI . . . B 2 2.163 2.077 -24.705 1 46.8 ? C7 HLI 1001 A 1 
HETATM 20 C C8 HLI . . . B 2 -0.384 3.859 -24.611 1 41.78 ? C8 HLI 1001 A 1 
HETATM 21 C C9 HLI . . . B 2 3.086 1.258 -24.05 1 48.01 ? C9 HLI 1001 A 1 
HETATM 22 C C10 HLI . . . B 2 4.42 1.667 -23.956 1 49.01 ? C10 HLI 1001 A 1 
HETATM 23 C C11 HLI . . . B 2 4.802 2.877 -24.528 1 49.72 ? C11 HLI 1001 A 1 
HETATM 24 C C12 HLI . . . B 2 3.9 3.702 -25.196 1 49.84 ? C12 HLI 1001 A 1 
HETATM 25 C C13 HLI . . . B 2 2.572 3.285 -25.295 1 48.94 ? C13 HLI 1001 A 1 
HETATM 26 C C14 HLI . . . B 2 -3.765 -2.371 -26.826 1 44.21 ? C14 HLI 1001 A 1 
HETATM 27 C C15 HLI . . . B 2 0.294 4.249 -21.058 1 41.16 ? C15 HLI 1001 A 1 
HETATM 28 C C16 HLI . . . B 2 -0.843 4.881 -20.549 1 40.68 ? C16 HLI 1001 A 1 
HETATM 29 C C17 HLI . . . B 2 -0.98 5.09 -19.175 1 41.24 ? C17 HLI 1001 A 1 
HETATM 30 C C18 HLI . . . B 2 0.018 4.666 -18.29 1 41.79 ? C18 HLI 1001 A 1 
HETATM 31 C C19 HLI . . . B 2 1.156 4.038 -18.805 1 41.21 ? C19 HLI 1001 A 1 
HETATM 32 C C20 HLI . . . B 2 1.297 3.834 -20.179 1 41.25 ? C20 HLI 1001 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#