data_4DUQ # _model_server_result.job_id -kduN3ad6cz9PhWDEMg6Zg _model_server_result.datetime_utc '2025-03-24 16:14:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4duq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4DUQ # _exptl.entry_id 4DUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4DUQ _cell.length_a 84.67 _cell.length_b 84.67 _cell.length_c 58.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 21 A SER 20 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc2 A O GLU 24 A GLU 23 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc3 A O ASP 26 A ASP 25 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc4 A O LYS 29 A LYS 28 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc5 A OE1 GLU 34 A GLU 33 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc6 A OE2 GLU 34 A GLU 33 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc7 A OD1 ASP 64 A ASP 63 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc8 A OD1 ASN 66 A ASN 65 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc9 A OD1 ASP 68 A ASP 67 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc10 A O GLN 70 A GLN 69 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc11 A OE1 GLU 75 A GLU 74 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc12 A OE2 GLU 75 A GLU 74 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc13 C CA CA . A CA 101 1_555 I O HOH . A HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc14 D CA CA . A CA 102 1_555 I O HOH . A HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc15 B O SER 21 B SER 20 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc16 B O GLU 24 B GLU 23 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc17 B O ASP 26 B ASP 25 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc18 B O LYS 29 B LYS 28 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc19 B OE1 GLU 34 B GLU 33 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc20 B OE2 GLU 34 B GLU 33 1_555 G CA CA . B CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc21 B OD1 ASP 64 B ASP 63 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc22 B OD1 ASN 66 B ASN 65 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc23 B OD1 ASP 68 B ASP 67 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc24 B O GLN 70 B GLN 69 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc25 B OE1 GLU 75 B GLU 74 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc26 B OE2 GLU 75 B GLU 74 1_555 H CA CA . B CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc27 G CA CA . B CA 103 1_555 J O HOH . B HOH 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc28 H CA CA . B CA 104 1_555 J O HOH . B HOH 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DUQ _atom_sites.fract_transf_matrix[1][1] 0.011811 _atom_sites.fract_transf_matrix[1][2] 0.006819 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013638 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017153 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 101 101 CA CA . D 2 CA A 1 102 102 CA CA . E 3 15P B 1 101 98 15P 15P . F 3 15P B 1 102 99 15P 15P . G 2 CA B 1 103 104 CA CA . H 2 CA B 1 104 105 CA CA . I 4 HOH A 1 201 98 HOH HOH . I 4 HOH A 2 202 99 HOH HOH . I 4 HOH A 3 203 100 HOH HOH . I 4 HOH A 4 204 101 HOH HOH . I 4 HOH A 5 205 102 HOH HOH . I 4 HOH A 6 206 103 HOH HOH . I 4 HOH A 7 207 104 HOH HOH . I 4 HOH A 8 208 105 HOH HOH . I 4 HOH A 9 209 106 HOH HOH . I 4 HOH A 10 210 107 HOH HOH . I 4 HOH A 11 211 108 HOH HOH . I 4 HOH A 12 212 109 HOH HOH . I 4 HOH A 13 213 110 HOH HOH . I 4 HOH A 14 214 111 HOH HOH . I 4 HOH A 15 215 112 HOH HOH . I 4 HOH A 16 216 113 HOH HOH . I 4 HOH A 17 217 114 HOH HOH . I 4 HOH A 18 218 115 HOH HOH . I 4 HOH A 19 219 116 HOH HOH . I 4 HOH A 20 220 117 HOH HOH . I 4 HOH A 21 221 118 HOH HOH . I 4 HOH A 22 222 119 HOH HOH . I 4 HOH A 23 223 120 HOH HOH . I 4 HOH A 24 224 121 HOH HOH . I 4 HOH A 25 225 122 HOH HOH . I 4 HOH A 26 226 123 HOH HOH . I 4 HOH A 27 227 124 HOH HOH . I 4 HOH A 28 228 125 HOH HOH . I 4 HOH A 29 229 126 HOH HOH . I 4 HOH A 30 230 127 HOH HOH . I 4 HOH A 31 231 128 HOH HOH . I 4 HOH A 32 232 129 HOH HOH . I 4 HOH A 33 233 130 HOH HOH . I 4 HOH A 34 234 131 HOH HOH . I 4 HOH A 35 235 132 HOH HOH . I 4 HOH A 36 236 133 HOH HOH . I 4 HOH A 37 237 134 HOH HOH . I 4 HOH A 38 238 135 HOH HOH . I 4 HOH A 39 239 136 HOH HOH . I 4 HOH A 40 240 137 HOH HOH . I 4 HOH A 41 241 138 HOH HOH . I 4 HOH A 42 242 139 HOH HOH . I 4 HOH A 43 243 140 HOH HOH . I 4 HOH A 44 244 141 HOH HOH . I 4 HOH A 45 245 142 HOH HOH . I 4 HOH A 46 246 143 HOH HOH . I 4 HOH A 47 247 144 HOH HOH . I 4 HOH A 48 248 145 HOH HOH . I 4 HOH A 49 249 146 HOH HOH . I 4 HOH A 50 250 147 HOH HOH . I 4 HOH A 51 251 148 HOH HOH . I 4 HOH A 52 252 149 HOH HOH . I 4 HOH A 53 253 150 HOH HOH . I 4 HOH A 54 254 151 HOH HOH . I 4 HOH A 55 255 152 HOH HOH . I 4 HOH A 56 256 153 HOH HOH . I 4 HOH A 57 257 154 HOH HOH . I 4 HOH A 58 258 155 HOH HOH . I 4 HOH A 59 259 156 HOH HOH . I 4 HOH A 60 260 157 HOH HOH . I 4 HOH A 61 261 158 HOH HOH . I 4 HOH A 62 262 159 HOH HOH . I 4 HOH A 63 263 160 HOH HOH . I 4 HOH A 64 264 161 HOH HOH . I 4 HOH A 65 265 162 HOH HOH . I 4 HOH A 66 266 163 HOH HOH . I 4 HOH A 67 267 164 HOH HOH . I 4 HOH A 68 268 165 HOH HOH . I 4 HOH A 69 269 166 HOH HOH . I 4 HOH A 70 270 167 HOH HOH . I 4 HOH A 71 271 168 HOH HOH . I 4 HOH A 72 272 169 HOH HOH . I 4 HOH A 73 273 170 HOH HOH . I 4 HOH A 74 274 171 HOH HOH . I 4 HOH A 75 275 172 HOH HOH . I 4 HOH A 76 276 122 HOH HOH . I 4 HOH A 77 277 169 HOH HOH . I 4 HOH A 78 278 187 HOH HOH . I 4 HOH A 79 279 192 HOH HOH . J 4 HOH B 1 201 103 HOH HOH . J 4 HOH B 2 202 104 HOH HOH . J 4 HOH B 3 203 105 HOH HOH . J 4 HOH B 4 204 106 HOH HOH . J 4 HOH B 5 205 107 HOH HOH . J 4 HOH B 6 206 108 HOH HOH . J 4 HOH B 7 207 109 HOH HOH . J 4 HOH B 8 208 110 HOH HOH . J 4 HOH B 9 209 111 HOH HOH . J 4 HOH B 10 210 112 HOH HOH . J 4 HOH B 11 211 113 HOH HOH . J 4 HOH B 12 212 114 HOH HOH . J 4 HOH B 13 213 115 HOH HOH . J 4 HOH B 14 214 116 HOH HOH . J 4 HOH B 15 215 117 HOH HOH . J 4 HOH B 16 216 118 HOH HOH . J 4 HOH B 17 217 119 HOH HOH . J 4 HOH B 18 218 120 HOH HOH . J 4 HOH B 19 219 121 HOH HOH . J 4 HOH B 20 220 123 HOH HOH . J 4 HOH B 21 221 124 HOH HOH . J 4 HOH B 22 222 125 HOH HOH . J 4 HOH B 23 223 126 HOH HOH . J 4 HOH B 24 224 127 HOH HOH . J 4 HOH B 25 225 128 HOH HOH . J 4 HOH B 26 226 129 HOH HOH . J 4 HOH B 27 227 130 HOH HOH . J 4 HOH B 28 228 131 HOH HOH . J 4 HOH B 29 229 132 HOH HOH . J 4 HOH B 30 230 133 HOH HOH . J 4 HOH B 31 231 134 HOH HOH . J 4 HOH B 32 232 135 HOH HOH . J 4 HOH B 33 233 136 HOH HOH . J 4 HOH B 34 234 137 HOH HOH . J 4 HOH B 35 235 138 HOH HOH . J 4 HOH B 36 236 139 HOH HOH . J 4 HOH B 37 237 140 HOH HOH . J 4 HOH B 38 238 141 HOH HOH . J 4 HOH B 39 239 142 HOH HOH . J 4 HOH B 40 240 143 HOH HOH . J 4 HOH B 41 241 144 HOH HOH . J 4 HOH B 42 242 145 HOH HOH . J 4 HOH B 43 243 146 HOH HOH . J 4 HOH B 44 244 147 HOH HOH . J 4 HOH B 45 245 148 HOH HOH . J 4 HOH B 46 246 149 HOH HOH . J 4 HOH B 47 247 150 HOH HOH . J 4 HOH B 48 248 151 HOH HOH . J 4 HOH B 49 249 152 HOH HOH . J 4 HOH B 50 250 153 HOH HOH . J 4 HOH B 51 251 154 HOH HOH . J 4 HOH B 52 252 155 HOH HOH . J 4 HOH B 53 253 156 HOH HOH . J 4 HOH B 54 254 157 HOH HOH . J 4 HOH B 55 255 158 HOH HOH . J 4 HOH B 56 256 159 HOH HOH . J 4 HOH B 57 257 160 HOH HOH . J 4 HOH B 58 258 161 HOH HOH . J 4 HOH B 59 259 162 HOH HOH . J 4 HOH B 60 260 163 HOH HOH . J 4 HOH B 61 261 164 HOH HOH . J 4 HOH B 62 262 165 HOH HOH . J 4 HOH B 63 263 166 HOH HOH . J 4 HOH B 64 264 167 HOH HOH . J 4 HOH B 65 265 168 HOH HOH . J 4 HOH B 66 266 170 HOH HOH . J 4 HOH B 67 267 171 HOH HOH . J 4 HOH B 68 268 172 HOH HOH . J 4 HOH B 69 269 173 HOH HOH . J 4 HOH B 70 270 174 HOH HOH . J 4 HOH B 71 271 175 HOH HOH . J 4 HOH B 72 272 176 HOH HOH . J 4 HOH B 73 273 177 HOH HOH . J 4 HOH B 74 274 178 HOH HOH . J 4 HOH B 75 275 179 HOH HOH . J 4 HOH B 76 276 180 HOH HOH . J 4 HOH B 77 277 181 HOH HOH . J 4 HOH B 78 278 182 HOH HOH . J 4 HOH B 79 279 183 HOH HOH . J 4 HOH B 80 280 184 HOH HOH . J 4 HOH B 81 281 185 HOH HOH . J 4 HOH B 82 282 186 HOH HOH . J 4 HOH B 83 283 188 HOH HOH . J 4 HOH B 84 284 189 HOH HOH . J 4 HOH B 85 285 190 HOH HOH . J 4 HOH B 86 286 191 HOH HOH . J 4 HOH B 87 287 193 HOH HOH . J 4 HOH B 88 288 194 HOH HOH . J 4 HOH B 89 289 195 HOH HOH . J 4 HOH B 90 290 196 HOH HOH . J 4 HOH B 91 291 197 HOH HOH . J 4 HOH B 92 292 198 HOH HOH . J 4 HOH B 93 293 199 HOH HOH . J 4 HOH B 94 294 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 37.017 _atom_site.Cartn_y 15.563 _atom_site.Cartn_z -3.028 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #