data_4DW6 # _model_server_result.job_id q1LfLJ5BjsSZvFcxmEGk6g _model_server_result.datetime_utc '2025-01-11 00:44:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4DW6 # _exptl.entry_id 4DW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DW6 _cell.length_a 121.41 _cell.length_b 121.41 _cell.length_c 33.803 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -16.9015 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 165 n n C1 C2 GOL sing 166 n n C1 H11 GOL sing 167 n n C1 H12 GOL sing 168 n n O1 HO1 GOL sing 169 n n C2 O2 GOL sing 170 n n C2 C3 GOL sing 171 n n C2 H2 GOL sing 172 n n O2 HO2 GOL sing 173 n n C3 O3 GOL sing 174 n n C3 H31 GOL sing 175 n n C3 H32 GOL sing 176 n n O3 HO3 GOL sing 177 n n # _atom_sites.entry_id 4DW6 _atom_sites.fract_transf_matrix[1][1] 0.008237 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008237 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0MN A 1 301 1 0MN D4 . C 3 NH4 A 1 302 1 NH4 NH4 . D 4 GOL A 1 303 1 GOL GOL . E 4 GOL A 1 304 2 GOL GOL . F 4 GOL A 1 305 3 GOL GOL . G 5 HOH A 1 401 1 HOH HOH . G 5 HOH A 2 402 2 HOH HOH . G 5 HOH A 3 403 3 HOH HOH . G 5 HOH A 4 404 4 HOH HOH . G 5 HOH A 5 405 5 HOH HOH . G 5 HOH A 6 406 6 HOH HOH . G 5 HOH A 7 407 7 HOH HOH . G 5 HOH A 8 408 8 HOH HOH . G 5 HOH A 9 409 9 HOH HOH . G 5 HOH A 10 410 10 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 12 HOH HOH . G 5 HOH A 13 413 13 HOH HOH . G 5 HOH A 14 414 14 HOH HOH . G 5 HOH A 15 415 15 HOH HOH . G 5 HOH A 16 416 16 HOH HOH . G 5 HOH A 17 417 18 HOH HOH . G 5 HOH A 18 418 19 HOH HOH . G 5 HOH A 19 419 20 HOH HOH . G 5 HOH A 20 420 21 HOH HOH . G 5 HOH A 21 421 22 HOH HOH . G 5 HOH A 22 422 23 HOH HOH . G 5 HOH A 23 423 24 HOH HOH . G 5 HOH A 24 424 25 HOH HOH . G 5 HOH A 25 425 26 HOH HOH . G 5 HOH A 26 426 27 HOH HOH . G 5 HOH A 27 427 28 HOH HOH . G 5 HOH A 28 428 29 HOH HOH . G 5 HOH A 29 429 30 HOH HOH . G 5 HOH A 30 430 31 HOH HOH . G 5 HOH A 31 431 32 HOH HOH . G 5 HOH A 32 432 33 HOH HOH . G 5 HOH A 33 433 34 HOH HOH . G 5 HOH A 34 434 35 HOH HOH . G 5 HOH A 35 435 37 HOH HOH . G 5 HOH A 36 436 38 HOH HOH . G 5 HOH A 37 437 39 HOH HOH . G 5 HOH A 38 438 40 HOH HOH . G 5 HOH A 39 439 41 HOH HOH . G 5 HOH A 40 440 42 HOH HOH . G 5 HOH A 41 441 43 HOH HOH . G 5 HOH A 42 442 44 HOH HOH . G 5 HOH A 43 443 45 HOH HOH . G 5 HOH A 44 444 46 HOH HOH . G 5 HOH A 45 445 47 HOH HOH . G 5 HOH A 46 446 49 HOH HOH . G 5 HOH A 47 447 50 HOH HOH . G 5 HOH A 48 448 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 57.999 -31.211 0.134 1 54.42 ? C1 GOL 305 A 1 HETATM 2 O O1 GOL . . . F 4 58.453 -31.614 -1.179 1 47.89 ? O1 GOL 305 A 1 HETATM 3 C C2 GOL . . . F 4 57.177 -32.301 0.838 1 54.76 ? C2 GOL 305 A 1 HETATM 4 O O2 GOL . . . F 4 56.493 -33.133 -0.117 1 57.31 ? O2 GOL 305 A 1 HETATM 5 C C3 GOL . . . F 4 56.188 -31.691 1.844 1 60.21 ? C3 GOL 305 A 1 HETATM 6 O O3 GOL . . . F 4 56.93 -31.135 2.942 1 67.11 ? O3 GOL 305 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 433 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #