data_4DWH # _model_server_result.job_id pakZKjGur8_5jIykG0ZH0g _model_server_result.datetime_utc '2024-11-18 12:44:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dwh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":304}' # _entry.id 4DWH # _exptl.entry_id 4DWH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.9 _cell.angle_gamma 90 _cell.entry_id 4DWH _cell.length_a 122.37 _cell.length_b 48.81 _cell.length_c 113.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,U,V 1 1 C,D,O,P,Q,R,S,T,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 M N N ? 3 O N N ? 3 R N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 5 B CYS 21 1_555 B SG CYS 45 B CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 D SG CYS 5 D CYS 21 1_555 D SG CYS 45 D CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 4DWH _atom_sites.fract_transf_matrix[1][1] 0.008172 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00128 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020488 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PEG A 1 301 1 PEG PEG . F 3 PEG A 1 302 1 PEG PEG . G 3 PEG A 1 303 1 PEG PEG . H 3 PEG A 1 304 1 PEG PEG . I 3 PEG A 1 305 1 PEG PEG . J 3 PEG A 1 306 1 PEG PEG . K 4 PG4 A 1 307 1 PG4 PG4 . L 5 PO4 A 1 308 2 PO4 PO4 . M 3 PEG B 1 201 1 PEG PEG . N 5 PO4 B 1 202 1 PO4 PO4 . O 3 PEG C 1 301 1 PEG PEG . P 6 PGE C 1 302 1 PGE PG3 . Q 6 PGE C 1 303 1 PGE PG3 . R 3 PEG C 1 304 1 PEG PEG . S 4 PG4 D 1 201 1 PG4 PG4 . T 3 PEG D 1 202 1 PEG PEG . U 7 HOH A 1 401 1 HOH HOH . U 7 HOH A 2 402 3 HOH HOH . U 7 HOH A 3 403 6 HOH HOH . U 7 HOH A 4 404 9 HOH HOH . U 7 HOH A 5 405 17 HOH HOH . U 7 HOH A 6 406 22 HOH HOH . U 7 HOH A 7 407 23 HOH HOH . U 7 HOH A 8 408 24 HOH HOH . U 7 HOH A 9 409 25 HOH HOH . U 7 HOH A 10 410 35 HOH HOH . U 7 HOH A 11 411 37 HOH HOH . U 7 HOH A 12 412 40 HOH HOH . U 7 HOH A 13 413 46 HOH HOH . U 7 HOH A 14 414 49 HOH HOH . U 7 HOH A 15 415 50 HOH HOH . U 7 HOH A 16 416 54 HOH HOH . U 7 HOH A 17 417 55 HOH HOH . U 7 HOH A 18 418 57 HOH HOH . U 7 HOH A 19 419 60 HOH HOH . U 7 HOH A 20 420 61 HOH HOH . U 7 HOH A 21 421 62 HOH HOH . U 7 HOH A 22 422 64 HOH HOH . U 7 HOH A 23 423 65 HOH HOH . U 7 HOH A 24 424 66 HOH HOH . U 7 HOH A 25 425 67 HOH HOH . U 7 HOH A 26 426 69 HOH HOH . U 7 HOH A 27 427 73 HOH HOH . U 7 HOH A 28 428 74 HOH HOH . U 7 HOH A 29 429 80 HOH HOH . U 7 HOH A 30 430 90 HOH HOH . U 7 HOH A 31 431 91 HOH HOH . U 7 HOH A 32 432 93 HOH HOH . U 7 HOH A 33 433 94 HOH HOH . U 7 HOH A 34 434 95 HOH HOH . U 7 HOH A 35 435 96 HOH HOH . U 7 HOH A 36 436 97 HOH HOH . U 7 HOH A 37 437 98 HOH HOH . U 7 HOH A 38 438 99 HOH HOH . U 7 HOH A 39 439 101 HOH HOH . U 7 HOH A 40 440 102 HOH HOH . U 7 HOH A 41 441 107 HOH HOH . U 7 HOH A 42 442 109 HOH HOH . U 7 HOH A 43 443 120 HOH HOH . U 7 HOH A 44 444 122 HOH HOH . U 7 HOH A 45 445 125 HOH HOH . U 7 HOH A 46 446 126 HOH HOH . U 7 HOH A 47 447 127 HOH HOH . U 7 HOH A 48 448 130 HOH HOH . U 7 HOH A 49 449 134 HOH HOH . U 7 HOH A 50 450 135 HOH HOH . U 7 HOH A 51 451 138 HOH HOH . U 7 HOH A 52 452 143 HOH HOH . U 7 HOH A 53 453 144 HOH HOH . U 7 HOH A 54 454 145 HOH HOH . V 7 HOH B 1 301 2 HOH HOH . V 7 HOH B 2 302 10 HOH HOH . V 7 HOH B 3 303 12 HOH HOH . V 7 HOH B 4 304 18 HOH HOH . V 7 HOH B 5 305 19 HOH HOH . V 7 HOH B 6 306 20 HOH HOH . V 7 HOH B 7 307 21 HOH HOH . V 7 HOH B 8 308 28 HOH HOH . V 7 HOH B 9 309 38 HOH HOH . V 7 HOH B 10 310 45 HOH HOH . V 7 HOH B 11 311 51 HOH HOH . V 7 HOH B 12 312 63 HOH HOH . V 7 HOH B 13 313 72 HOH HOH . V 7 HOH B 14 314 75 HOH HOH . V 7 HOH B 15 315 89 HOH HOH . V 7 HOH B 16 316 100 HOH HOH . V 7 HOH B 17 317 105 HOH HOH . V 7 HOH B 18 318 129 HOH HOH . V 7 HOH B 19 319 132 HOH HOH . V 7 HOH B 20 320 140 HOH HOH . V 7 HOH B 21 321 148 HOH HOH . V 7 HOH B 22 322 149 HOH HOH . W 7 HOH C 1 401 5 HOH HOH . W 7 HOH C 2 402 11 HOH HOH . W 7 HOH C 3 403 13 HOH HOH . W 7 HOH C 4 404 14 HOH HOH . W 7 HOH C 5 405 15 HOH HOH . W 7 HOH C 6 406 26 HOH HOH . W 7 HOH C 7 407 27 HOH HOH . W 7 HOH C 8 408 32 HOH HOH . W 7 HOH C 9 409 34 HOH HOH . W 7 HOH C 10 410 36 HOH HOH . W 7 HOH C 11 411 39 HOH HOH . W 7 HOH C 12 412 42 HOH HOH . W 7 HOH C 13 413 52 HOH HOH . W 7 HOH C 14 414 53 HOH HOH . W 7 HOH C 15 415 58 HOH HOH . W 7 HOH C 16 416 68 HOH HOH . W 7 HOH C 17 417 76 HOH HOH . W 7 HOH C 18 418 77 HOH HOH . W 7 HOH C 19 419 79 HOH HOH . W 7 HOH C 20 420 81 HOH HOH . W 7 HOH C 21 421 83 HOH HOH . W 7 HOH C 22 422 87 HOH HOH . W 7 HOH C 23 423 88 HOH HOH . W 7 HOH C 24 424 92 HOH HOH . W 7 HOH C 25 425 104 HOH HOH . W 7 HOH C 26 426 108 HOH HOH . W 7 HOH C 27 427 114 HOH HOH . W 7 HOH C 28 428 118 HOH HOH . W 7 HOH C 29 429 119 HOH HOH . W 7 HOH C 30 430 121 HOH HOH . W 7 HOH C 31 431 124 HOH HOH . W 7 HOH C 32 432 128 HOH HOH . W 7 HOH C 33 433 136 HOH HOH . X 7 HOH D 1 301 4 HOH HOH . X 7 HOH D 2 302 7 HOH HOH . X 7 HOH D 3 303 8 HOH HOH . X 7 HOH D 4 304 29 HOH HOH . X 7 HOH D 5 305 30 HOH HOH . X 7 HOH D 6 306 31 HOH HOH . X 7 HOH D 7 307 33 HOH HOH . X 7 HOH D 8 308 41 HOH HOH . X 7 HOH D 9 309 43 HOH HOH . X 7 HOH D 10 310 47 HOH HOH . X 7 HOH D 11 311 56 HOH HOH . X 7 HOH D 12 312 59 HOH HOH . X 7 HOH D 13 313 71 HOH HOH . X 7 HOH D 14 314 82 HOH HOH . X 7 HOH D 15 315 85 HOH HOH . X 7 HOH D 16 316 110 HOH HOH . X 7 HOH D 17 317 112 HOH HOH . X 7 HOH D 18 318 115 HOH HOH . X 7 HOH D 19 319 116 HOH HOH . X 7 HOH D 20 320 117 HOH HOH . X 7 HOH D 21 321 131 HOH HOH . X 7 HOH D 22 322 133 HOH HOH . X 7 HOH D 23 323 141 HOH HOH . X 7 HOH D 24 324 142 HOH HOH . X 7 HOH D 25 325 150 HOH HOH . X 7 HOH D 26 326 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . R 3 34.102 32.025 27.284 1 57.98 ? C1 PEG 304 C 1 HETATM 2 O O1 PEG . . . R 3 33.236 32.874 27.941 1 56.28 ? O1 PEG 304 C 1 HETATM 3 C C2 PEG . . . R 3 35.065 31.251 28.116 1 59.03 ? C2 PEG 304 C 1 HETATM 4 O O2 PEG . . . R 3 34.675 30.95 29.402 1 59.95 ? O2 PEG 304 C 1 HETATM 5 C C3 PEG . . . R 3 35.399 30.038 30.138 0 59.88 ? C3 PEG 304 C 1 HETATM 6 C C4 PEG . . . R 3 35.032 28.599 30.008 0 59.87 ? C4 PEG 304 C 1 HETATM 7 O O4 PEG . . . R 3 35.085 28.032 28.751 0 59.9 ? O4 PEG 304 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 7 #