data_4DWI # _model_server_result.job_id QduXAY6RnE-nclweN7OIiA _model_server_result.datetime_utc '2024-11-15 00:02:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dwi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":101}' # _entry.id 4DWI # _exptl.entry_id 4DWI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DWI _cell.length_a 88.051 _cell.length_b 93.545 _cell.length_c 105.543 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DWI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 N O7 9MG . B 9MG 101 1_555 O CA CA . C CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc2 C OP2 DC 2 C DC 2 1_555 O CA CA . C CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc3 O CA CA . C CA 101 1_555 R O HOH . C HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? hydrog WATSON-CRICK hydrog1 B N3 DT 3 B DT 3 1_555 C N1 DA 10 C DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B O4 DT 3 B DT 3 1_555 C N6 DA 10 C DA 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N1 DG 4 B DG 4 1_555 C N3 DC 9 C DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N2 DG 4 B DG 4 1_555 C O2 DC 9 C DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O6 DG 4 B DG 4 1_555 C N4 DC 9 C DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N1 DG 5 B DG 5 1_555 C N3 DC 8 C DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N2 DG 5 B DG 5 1_555 C O2 DC 8 C DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O6 DG 5 B DG 5 1_555 C N4 DC 8 C DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N1 DA 6 B DA 6 1_555 C N3 DT 7 C DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N6 DA 6 B DA 6 1_555 C O4 DT 7 C DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N3 DT 7 B DT 7 1_555 C N1 DA 6 C DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O4 DT 7 B DT 7 1_555 C N6 DA 6 C DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 DC 8 B DC 8 1_555 C N1 DG 5 C DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N4 DC 8 B DC 8 1_555 C O6 DG 5 C DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O2 DC 8 B DC 8 1_555 C N2 DG 5 C DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N3 DC 9 B DC 9 1_555 C N1 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N4 DC 9 B DC 9 1_555 C O6 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O2 DC 9 B DC 9 1_555 C N2 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N1 DA 10 B DA 10 1_555 C N3 DT 3 C DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N6 DA 10 B DA 10 1_555 C O4 DT 3 C DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DWI _atom_sites.fract_transf_matrix[1][1] 0.011357 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GOL A 1 901 1 GOL GOL . E 3 GOL A 1 902 2 GOL GOL . F 3 GOL A 1 903 3 GOL GOL . G 3 GOL A 1 904 4 GOL GOL . H 4 SO4 A 1 905 1 SO4 SO4 . I 4 SO4 A 1 906 2 SO4 SO4 . J 4 SO4 A 1 907 3 SO4 SO4 . K 4 SO4 A 1 908 4 SO4 SO4 . L 4 SO4 A 1 909 5 SO4 SO4 . M 4 SO4 A 1 910 6 SO4 SO4 . N 5 9MG B 1 101 11 9MG GD . O 6 CA C 1 101 1 CA CA . P 7 HOH A 1 1001 1 HOH HOH . P 7 HOH A 2 1002 2 HOH HOH . P 7 HOH A 3 1003 3 HOH HOH . P 7 HOH A 4 1004 4 HOH HOH . P 7 HOH A 5 1005 5 HOH HOH . P 7 HOH A 6 1006 6 HOH HOH . P 7 HOH A 7 1007 8 HOH HOH . P 7 HOH A 8 1008 9 HOH HOH . P 7 HOH A 9 1009 10 HOH HOH . P 7 HOH A 10 1010 11 HOH HOH . P 7 HOH A 11 1011 12 HOH HOH . P 7 HOH A 12 1012 13 HOH HOH . P 7 HOH A 13 1013 14 HOH HOH . P 7 HOH A 14 1014 15 HOH HOH . P 7 HOH A 15 1015 16 HOH HOH . P 7 HOH A 16 1016 17 HOH HOH . P 7 HOH A 17 1017 18 HOH HOH . P 7 HOH A 18 1018 19 HOH HOH . P 7 HOH A 19 1019 20 HOH HOH . P 7 HOH A 20 1020 21 HOH HOH . P 7 HOH A 21 1021 22 HOH HOH . P 7 HOH A 22 1022 23 HOH HOH . P 7 HOH A 23 1023 24 HOH HOH . P 7 HOH A 24 1024 25 HOH HOH . P 7 HOH A 25 1025 26 HOH HOH . P 7 HOH A 26 1026 27 HOH HOH . P 7 HOH A 27 1027 28 HOH HOH . P 7 HOH A 28 1028 29 HOH HOH . P 7 HOH A 29 1029 30 HOH HOH . P 7 HOH A 30 1030 31 HOH HOH . P 7 HOH A 31 1031 32 HOH HOH . P 7 HOH A 32 1032 33 HOH HOH . P 7 HOH A 33 1033 34 HOH HOH . P 7 HOH A 34 1034 35 HOH HOH . P 7 HOH A 35 1035 36 HOH HOH . P 7 HOH A 36 1036 37 HOH HOH . P 7 HOH A 37 1037 38 HOH HOH . P 7 HOH A 38 1038 39 HOH HOH . P 7 HOH A 39 1039 40 HOH HOH . P 7 HOH A 40 1040 41 HOH HOH . P 7 HOH A 41 1041 42 HOH HOH . P 7 HOH A 42 1042 43 HOH HOH . P 7 HOH A 43 1043 44 HOH HOH . P 7 HOH A 44 1044 45 HOH HOH . P 7 HOH A 45 1045 46 HOH HOH . P 7 HOH A 46 1046 47 HOH HOH . P 7 HOH A 47 1047 48 HOH HOH . P 7 HOH A 48 1048 49 HOH HOH . P 7 HOH A 49 1049 50 HOH HOH . P 7 HOH A 50 1050 51 HOH HOH . P 7 HOH A 51 1051 52 HOH HOH . P 7 HOH A 52 1052 53 HOH HOH . P 7 HOH A 53 1053 54 HOH HOH . P 7 HOH A 54 1054 56 HOH HOH . P 7 HOH A 55 1055 57 HOH HOH . P 7 HOH A 56 1056 58 HOH HOH . P 7 HOH A 57 1057 59 HOH HOH . P 7 HOH A 58 1058 60 HOH HOH . P 7 HOH A 59 1059 61 HOH HOH . P 7 HOH A 60 1060 62 HOH HOH . P 7 HOH A 61 1061 63 HOH HOH . P 7 HOH A 62 1062 64 HOH HOH . P 7 HOH A 63 1063 65 HOH HOH . P 7 HOH A 64 1064 67 HOH HOH . P 7 HOH A 65 1065 68 HOH HOH . P 7 HOH A 66 1066 69 HOH HOH . P 7 HOH A 67 1067 70 HOH HOH . P 7 HOH A 68 1068 71 HOH HOH . P 7 HOH A 69 1069 72 HOH HOH . P 7 HOH A 70 1070 73 HOH HOH . P 7 HOH A 71 1071 74 HOH HOH . P 7 HOH A 72 1072 75 HOH HOH . P 7 HOH A 73 1073 76 HOH HOH . P 7 HOH A 74 1074 77 HOH HOH . P 7 HOH A 75 1075 78 HOH HOH . P 7 HOH A 76 1076 79 HOH HOH . P 7 HOH A 77 1077 80 HOH HOH . P 7 HOH A 78 1078 81 HOH HOH . P 7 HOH A 79 1079 82 HOH HOH . P 7 HOH A 80 1080 83 HOH HOH . P 7 HOH A 81 1081 84 HOH HOH . P 7 HOH A 82 1082 85 HOH HOH . P 7 HOH A 83 1083 86 HOH HOH . P 7 HOH A 84 1084 87 HOH HOH . P 7 HOH A 85 1085 88 HOH HOH . P 7 HOH A 86 1086 89 HOH HOH . P 7 HOH A 87 1087 92 HOH HOH . P 7 HOH A 88 1088 93 HOH HOH . P 7 HOH A 89 1089 94 HOH HOH . P 7 HOH A 90 1090 95 HOH HOH . P 7 HOH A 91 1091 96 HOH HOH . P 7 HOH A 92 1092 97 HOH HOH . P 7 HOH A 93 1093 98 HOH HOH . P 7 HOH A 94 1094 99 HOH HOH . P 7 HOH A 95 1095 102 HOH HOH . P 7 HOH A 96 1096 103 HOH HOH . P 7 HOH A 97 1097 104 HOH HOH . P 7 HOH A 98 1098 105 HOH HOH . P 7 HOH A 99 1099 106 HOH HOH . P 7 HOH A 100 1100 108 HOH HOH . P 7 HOH A 101 1101 109 HOH HOH . P 7 HOH A 102 1102 110 HOH HOH . P 7 HOH A 103 1103 112 HOH HOH . P 7 HOH A 104 1104 113 HOH HOH . P 7 HOH A 105 1105 114 HOH HOH . P 7 HOH A 106 1106 115 HOH HOH . P 7 HOH A 107 1107 116 HOH HOH . P 7 HOH A 108 1108 117 HOH HOH . P 7 HOH A 109 1109 118 HOH HOH . P 7 HOH A 110 1110 119 HOH HOH . P 7 HOH A 111 1111 120 HOH HOH . P 7 HOH A 112 1112 121 HOH HOH . P 7 HOH A 113 1113 122 HOH HOH . P 7 HOH A 114 1114 123 HOH HOH . P 7 HOH A 115 1115 124 HOH HOH . P 7 HOH A 116 1116 125 HOH HOH . P 7 HOH A 117 1117 126 HOH HOH . P 7 HOH A 118 1118 127 HOH HOH . P 7 HOH A 119 1119 128 HOH HOH . P 7 HOH A 120 1120 129 HOH HOH . P 7 HOH A 121 1121 130 HOH HOH . P 7 HOH A 122 1122 131 HOH HOH . P 7 HOH A 123 1123 132 HOH HOH . P 7 HOH A 124 1124 133 HOH HOH . P 7 HOH A 125 1125 134 HOH HOH . P 7 HOH A 126 1126 135 HOH HOH . P 7 HOH A 127 1127 136 HOH HOH . P 7 HOH A 128 1128 137 HOH HOH . P 7 HOH A 129 1129 139 HOH HOH . P 7 HOH A 130 1130 140 HOH HOH . P 7 HOH A 131 1131 141 HOH HOH . P 7 HOH A 132 1132 142 HOH HOH . P 7 HOH A 133 1133 143 HOH HOH . P 7 HOH A 134 1134 144 HOH HOH . P 7 HOH A 135 1135 146 HOH HOH . P 7 HOH A 136 1136 147 HOH HOH . P 7 HOH A 137 1137 148 HOH HOH . P 7 HOH A 138 1138 149 HOH HOH . P 7 HOH A 139 1139 150 HOH HOH . P 7 HOH A 140 1140 151 HOH HOH . P 7 HOH A 141 1141 152 HOH HOH . P 7 HOH A 142 1142 153 HOH HOH . P 7 HOH A 143 1143 154 HOH HOH . P 7 HOH A 144 1144 156 HOH HOH . P 7 HOH A 145 1145 157 HOH HOH . P 7 HOH A 146 1146 158 HOH HOH . P 7 HOH A 147 1147 159 HOH HOH . P 7 HOH A 148 1148 160 HOH HOH . P 7 HOH A 149 1149 161 HOH HOH . P 7 HOH A 150 1150 162 HOH HOH . P 7 HOH A 151 1151 163 HOH HOH . P 7 HOH A 152 1152 164 HOH HOH . P 7 HOH A 153 1153 165 HOH HOH . P 7 HOH A 154 1154 166 HOH HOH . P 7 HOH A 155 1155 167 HOH HOH . P 7 HOH A 156 1156 168 HOH HOH . P 7 HOH A 157 1157 169 HOH HOH . P 7 HOH A 158 1158 170 HOH HOH . P 7 HOH A 159 1159 171 HOH HOH . P 7 HOH A 160 1160 172 HOH HOH . P 7 HOH A 161 1161 173 HOH HOH . P 7 HOH A 162 1162 174 HOH HOH . P 7 HOH A 163 1163 175 HOH HOH . P 7 HOH A 164 1164 176 HOH HOH . P 7 HOH A 165 1165 180 HOH HOH . P 7 HOH A 166 1166 181 HOH HOH . P 7 HOH A 167 1167 183 HOH HOH . P 7 HOH A 168 1168 184 HOH HOH . P 7 HOH A 169 1169 186 HOH HOH . P 7 HOH A 170 1170 189 HOH HOH . P 7 HOH A 171 1171 190 HOH HOH . P 7 HOH A 172 1172 191 HOH HOH . P 7 HOH A 173 1173 193 HOH HOH . P 7 HOH A 174 1174 194 HOH HOH . P 7 HOH A 175 1175 195 HOH HOH . P 7 HOH A 176 1176 196 HOH HOH . P 7 HOH A 177 1177 197 HOH HOH . P 7 HOH A 178 1178 198 HOH HOH . P 7 HOH A 179 1179 200 HOH HOH . P 7 HOH A 180 1180 201 HOH HOH . P 7 HOH A 181 1181 203 HOH HOH . P 7 HOH A 182 1182 206 HOH HOH . P 7 HOH A 183 1183 207 HOH HOH . P 7 HOH A 184 1184 208 HOH HOH . P 7 HOH A 185 1185 210 HOH HOH . P 7 HOH A 186 1186 177 HOH HOH . Q 7 HOH B 1 201 55 HOH HOH . Q 7 HOH B 2 202 66 HOH HOH . Q 7 HOH B 3 203 101 HOH HOH . Q 7 HOH B 4 204 107 HOH HOH . Q 7 HOH B 5 205 178 HOH HOH . Q 7 HOH B 6 206 179 HOH HOH . Q 7 HOH B 7 207 182 HOH HOH . Q 7 HOH B 8 208 185 HOH HOH . Q 7 HOH B 9 209 187 HOH HOH . Q 7 HOH B 10 210 188 HOH HOH . Q 7 HOH B 11 211 199 HOH HOH . Q 7 HOH B 12 212 204 HOH HOH . R 7 HOH C 1 201 7 HOH HOH . R 7 HOH C 2 202 90 HOH HOH . R 7 HOH C 3 203 91 HOH HOH . R 7 HOH C 4 204 100 HOH HOH . R 7 HOH C 5 205 111 HOH HOH . R 7 HOH C 6 206 138 HOH HOH . R 7 HOH C 7 207 145 HOH HOH . R 7 HOH C 8 208 155 HOH HOH . R 7 HOH C 9 209 192 HOH HOH . R 7 HOH C 10 210 205 HOH HOH . R 7 HOH C 11 211 209 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 6 _atom_site.Cartn_x -31.566 _atom_site.Cartn_y -26.39 _atom_site.Cartn_z 22.021 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #