data_4DXS # _model_server_result.job_id dTiYs2s7g5c6tliV0h_yNw _model_server_result.datetime_utc '2024-11-04 22:24:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dxs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 4DXS # _exptl.entry_id 4DXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4DXS _cell.length_a 79.32 _cell.length_b 79.32 _cell.length_c 260.03 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 39.66 68.693135 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -39.66 68.693135 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 48 A CYS 563 1_555 B SG CYS 12 B CYS 6862 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.769 ? disulf ? disulf2 A SG CYS 86 A CYS 601 1_555 A SG CYS 190 A CYS 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc1 A O VAL 75 A VAL 590 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc2 A O GLN 78 A GLN 593 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc3 A O ASP 80 A ASP 595 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.294 ? metalc ? metalc4 A O TYR 192 A TYR 707 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DXS _atom_sites.fract_transf_matrix[1][1] 0.012607 _atom_sites.fract_transf_matrix[1][2] 0.007279 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014557 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003846 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMU A 1 801 801 DMU DMU . D 4 K A 1 802 1001 K K . E 5 HOH A 1 901 1002 HOH HOH . E 5 HOH A 2 902 1003 HOH HOH . E 5 HOH A 3 903 1004 HOH HOH . E 5 HOH A 4 904 1005 HOH HOH . E 5 HOH A 5 905 1006 HOH HOH . E 5 HOH A 6 906 1007 HOH HOH . E 5 HOH A 7 907 1008 HOH HOH . E 5 HOH A 8 908 1009 HOH HOH . E 5 HOH A 9 909 1010 HOH HOH . E 5 HOH A 10 910 1011 HOH HOH . E 5 HOH A 11 911 1013 HOH HOH . E 5 HOH A 12 912 1014 HOH HOH . E 5 HOH A 13 913 1015 HOH HOH . E 5 HOH A 14 914 1016 HOH HOH . E 5 HOH A 15 915 1017 HOH HOH . E 5 HOH A 16 916 1018 HOH HOH . E 5 HOH A 17 917 1019 HOH HOH . E 5 HOH A 18 918 1020 HOH HOH . E 5 HOH A 19 919 1022 HOH HOH . E 5 HOH A 20 920 1023 HOH HOH . E 5 HOH A 21 921 1024 HOH HOH . E 5 HOH A 22 922 1028 HOH HOH . E 5 HOH A 23 923 1029 HOH HOH . E 5 HOH A 24 924 1030 HOH HOH . E 5 HOH A 25 925 1031 HOH HOH . E 5 HOH A 26 926 1032 HOH HOH . E 5 HOH A 27 927 1033 HOH HOH . E 5 HOH A 28 928 1034 HOH HOH . E 5 HOH A 29 929 1035 HOH HOH . E 5 HOH A 30 930 1036 HOH HOH . E 5 HOH A 31 931 1037 HOH HOH . E 5 HOH A 32 932 1038 HOH HOH . E 5 HOH A 33 933 1039 HOH HOH . E 5 HOH A 34 934 1040 HOH HOH . E 5 HOH A 35 935 1041 HOH HOH . E 5 HOH A 36 936 1042 HOH HOH . F 5 HOH B 1 6901 6901 HOH HOH . F 5 HOH B 2 6902 6902 HOH HOH . F 5 HOH B 3 6903 6905 HOH HOH . F 5 HOH B 4 6904 6906 HOH HOH . F 5 HOH B 5 6905 6907 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -2.595 _atom_site.Cartn_y 35.364 _atom_site.Cartn_z 16.998 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 80.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #