data_4DYA # _model_server_result.job_id wYr8ZTwLJjlK_VOTYaTKFg _model_server_result.datetime_utc '2025-03-05 01:42:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 4DYA # _exptl.entry_id 4DYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 565.962 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]furan-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DYA _cell.length_a 145.496 _cell.length_b 145.496 _cell.length_c 145.496 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1,2,3 B,D,F 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -72.748 -72.748 3 'crystal symmetry operation' 11_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 72.748 -72.748 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H24 Cl N5 O7' _chem_comp.formula_weight 565.962 _chem_comp.id 0MF _chem_comp.mon_nstd_flag . _chem_comp.name N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]furan-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O34 C20 0MF doub 1 n n C26 C19 0MF sing 2 n n C27 O39 0MF sing 3 n n C20 C11 0MF sing 4 n n C20 N30 0MF sing 5 n n O39 C15 0MF sing 6 n n C19 C11 0MF doub 7 n y C19 O38 0MF sing 8 n y C24 N30 0MF sing 9 n n C24 C22 0MF sing 10 n n C11 C17 0MF sing 11 n y C6 C3 0MF sing 12 n y C6 C18 0MF doub 13 n y O38 N28 0MF sing 14 n y N30 C25 0MF sing 15 n n C22 N29 0MF sing 16 n n O35 C21 0MF doub 17 n n C3 C9 0MF doub 18 n y C17 N28 0MF doub 19 n y C17 C10 0MF sing 20 n n C15 C10 0MF doub 21 n y C15 C5 0MF sing 22 n y C18 C21 0MF sing 23 n n C18 O37 0MF sing 24 n y C21 N31 0MF sing 25 n n C10 C4 0MF sing 26 n y C5 C2 0MF doub 27 n y C25 C23 0MF sing 28 n n C9 O37 0MF sing 29 n y N29 C23 0MF sing 30 n n N29 C12 0MF sing 31 n n C7 C12 0MF doub 32 n y C7 C13 0MF sing 33 n y N31 C13 0MF sing 34 n n C12 C16 0MF sing 35 n y C4 C1 0MF doub 36 n y C2 C1 0MF sing 37 n y C13 C14 0MF doub 38 n y C16 CL4 0MF sing 39 n n C16 C8 0MF doub 40 n y C14 C8 0MF sing 41 n y C14 N32 0MF sing 42 n n O36 N32 0MF sing 43 n n N32 O33 0MF doub 44 n n C1 H1 0MF sing 45 n n C2 H2 0MF sing 46 n n C3 H3 0MF sing 47 n n C4 H4 0MF sing 48 n n C5 H5 0MF sing 49 n n C6 H6 0MF sing 50 n n C7 H7 0MF sing 51 n n C8 H8 0MF sing 52 n n C9 H9 0MF sing 53 n n C22 H10 0MF sing 54 n n C22 H11 0MF sing 55 n n C23 H12 0MF sing 56 n n C23 H13 0MF sing 57 n n C24 H14 0MF sing 58 n n C24 H15 0MF sing 59 n n C25 H16 0MF sing 60 n n C25 H17 0MF sing 61 n n C26 H18 0MF sing 62 n n C26 H19 0MF sing 63 n n C26 H20 0MF sing 64 n n C27 H21 0MF sing 65 n n C27 H22 0MF sing 66 n n C27 H23 0MF sing 67 n n N31 H24 0MF sing 68 n n # _atom_sites.entry_id 4DYA _atom_sites.fract_transf_matrix[1][1] 0.006873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0MF A 1 601 1 0MF LG1 . D 2 0MF B 1 601 1 0MF LG1 . E 3 HOH A 1 701 1 HOH HOH . E 3 HOH A 2 702 2 HOH HOH . E 3 HOH A 3 703 3 HOH HOH . E 3 HOH A 4 704 4 HOH HOH . E 3 HOH A 5 705 5 HOH HOH . E 3 HOH A 6 706 7 HOH HOH . E 3 HOH A 7 707 8 HOH HOH . E 3 HOH A 8 708 9 HOH HOH . E 3 HOH A 9 709 10 HOH HOH . E 3 HOH A 10 710 12 HOH HOH . E 3 HOH A 11 711 16 HOH HOH . E 3 HOH A 12 712 17 HOH HOH . E 3 HOH A 13 713 19 HOH HOH . E 3 HOH A 14 714 20 HOH HOH . E 3 HOH A 15 715 22 HOH HOH . E 3 HOH A 16 716 23 HOH HOH . E 3 HOH A 17 717 24 HOH HOH . F 3 HOH B 1 701 6 HOH HOH . F 3 HOH B 2 702 11 HOH HOH . F 3 HOH B 3 703 13 HOH HOH . F 3 HOH B 4 704 14 HOH HOH . F 3 HOH B 5 705 15 HOH HOH . F 3 HOH B 6 706 18 HOH HOH . F 3 HOH B 7 707 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0MF . . . D 2 0.42 -28.932 14.255 1 36.6 ? C1 0MF 601 B 1 HETATM 2 C C2 0MF . . . D 2 -0.537 -29.717 13.608 1 37.1 ? C2 0MF 601 B 1 HETATM 3 C C3 0MF . . . D 2 -4.939 -38.076 11.231 1 43.28 ? C3 0MF 601 B 1 HETATM 4 C C4 0MF . . . D 2 1.52 -28.453 13.544 1 36.33 ? C4 0MF 601 B 1 HETATM 5 C C5 0MF . . . D 2 -0.391 -30.022 12.253 1 36.85 ? C5 0MF 601 B 1 HETATM 6 C C6 0MF . . . D 2 -3.939 -37.158 10.833 1 43.31 ? C6 0MF 601 B 1 HETATM 7 C C7 0MF . . . D 2 0.675 -34.995 12.941 1 43.27 ? C7 0MF 601 B 1 HETATM 8 C C8 0MF . . . D 2 1.677 -35.633 15.482 1 43.29 ? C8 0MF 601 B 1 HETATM 9 C C9 0MF . . . D 2 -4.59 -38.499 12.495 1 43.4 ? C9 0MF 601 B 1 HETATM 10 C C10 0MF . . . D 2 1.667 -28.758 12.191 1 36.37 ? C10 0MF 601 B 1 HETATM 11 C C11 0MF . . . D 2 3.657 -28.934 10.583 1 37.19 ? C11 0MF 601 B 1 HETATM 12 C C12 0MF . . . D 2 1.853 -34.405 13.395 1 43.15 ? C12 0MF 601 B 1 HETATM 13 C C13 0MF . . . D 2 0.004 -35.906 13.759 1 43.39 ? C13 0MF 601 B 1 HETATM 14 C C14 0MF . . . D 2 0.505 -36.22 15.021 1 43.43 ? C14 0MF 601 B 1 HETATM 15 C C15 0MF . . . D 2 0.712 -29.541 11.544 1 36.67 ? C15 0MF 601 B 1 HETATM 16 C C16 0MF . . . D 2 2.343 -34.725 14.664 1 43.28 ? C16 0MF 601 B 1 HETATM 17 C C17 0MF . . . D 2 2.818 -28.252 11.488 1 36.75 ? C17 0MF 601 B 1 HETATM 18 C C18 0MF . . . D 2 -3.05 -37.083 11.883 1 43.47 ? C18 0MF 601 B 1 HETATM 19 C C19 0MF . . . D 2 4.578 -27.979 10.232 1 36.71 ? C19 0MF 601 B 1 HETATM 20 C C20 0MF . . . D 2 3.637 -30.313 10.059 1 38.3 ? C20 0MF 601 B 1 HETATM 21 C C21 0MF . . . D 2 -1.81 -36.302 12.062 1 43.41 ? C21 0MF 601 B 1 HETATM 22 C C22 0MF . . . D 2 2.447 -33.614 11.116 1 41.46 ? C22 0MF 601 B 1 HETATM 23 C C23 0MF . . . D 2 2.487 -32.084 13.044 1 41.67 ? C23 0MF 601 B 1 HETATM 24 C C24 0MF . . . D 2 3.583 -32.816 10.481 1 40.28 ? C24 0MF 601 B 1 HETATM 25 C C25 0MF . . . D 2 3.571 -31.241 12.374 1 40.19 ? C25 0MF 601 B 1 HETATM 26 C C26 0MF . . . D 2 5.739 -27.975 9.333 1 36.38 ? C26 0MF 601 B 1 HETATM 27 C C27 0MF . . . D 2 -0.191 -30.664 9.643 1 36.01 ? C27 0MF 601 B 1 HETATM 28 N N28 0MF . . . D 2 3.206 -26.986 11.684 1 36.69 ? N28 0MF 601 B 1 HETATM 29 N N29 0MF . . . D 2 2.518 -33.482 12.575 1 43.01 ? N29 0MF 601 B 1 HETATM 30 N N30 0MF . . . D 2 3.592 -31.416 10.923 1 39.45 ? N30 0MF 601 B 1 HETATM 31 N N31 0MF . . . D 2 -1.169 -36.501 13.298 1 43.2 ? N31 0MF 601 B 1 HETATM 32 N N32 0MF . . . D 2 -0.166 -37.14 15.86 1 43.5 ? N32 0MF 601 B 1 HETATM 33 O O33 0MF . . . D 2 0.13 -37.167 17.075 1 44.16 ? O33 0MF 601 B 1 HETATM 34 O O34 0MF . . . D 2 3.669 -30.406 8.834 1 38.02 ? O34 0MF 601 B 1 HETATM 35 O O35 0MF . . . D 2 -1.395 -35.544 11.185 1 43.31 ? O35 0MF 601 B 1 HETATM 36 O O36 0MF . . . D 2 -1.176 -37.73 15.411 1 44.61 ? O36 0MF 601 B 1 HETATM 37 O O37 0MF . . . D 2 -3.44 -37.899 12.905 1 43.47 ? O37 0MF 601 B 1 HETATM 38 O O38 0MF . . . D 2 4.323 -26.814 10.882 1 36.07 ? O38 0MF 601 B 1 HETATM 39 O O39 0MF . . . D 2 0.83 -29.852 10.22 1 36.67 ? O39 0MF 601 B 1 HETATM 40 CL CL4 0MF . . . D 2 3.795 -34.034 15.274 1 43.33 ? CL4 0MF 601 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #