data_4DYN # _model_server_result.job_id kYHQ25DetyVYFtXfPcR2Fw _model_server_result.datetime_utc '2025-03-05 01:31:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dyn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4DYN # _exptl.entry_id 4DYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 576.988 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]pyridine-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DYN _cell.length_a 145.61 _cell.length_b 145.61 _cell.length_c 145.61 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 software_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1,2,3 B,D,F 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -72.805 -72.805 3 'crystal symmetry operation' 11_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 72.805 -72.805 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C28 H25 Cl N6 O6' _chem_comp.formula_weight 576.988 _chem_comp.id 0MR _chem_comp.mon_nstd_flag . _chem_comp.name N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C4 0MR doub 1 n y C10 N29 0MR sing 2 n y O35 N34 0MR sing 3 n n O38 N34 0MR doub 4 n n C4 C3 0MR sing 5 n y N34 C15 0MR sing 6 n n N29 C19 0MR doub 7 n y C3 C7 0MR doub 8 n y C19 C7 0MR sing 9 n y C19 C22 0MR sing 10 n n C15 C9 0MR doub 11 n y C15 C14 0MR sing 12 n y N33 C14 0MR sing 13 n n N33 C22 0MR sing 14 n n C9 C17 0MR sing 15 n y C14 C8 0MR doub 16 n y C22 O37 0MR doub 17 n n C17 CL4 0MR sing 18 n n C17 C13 0MR doub 19 n y C8 C13 0MR sing 20 n y C13 N31 0MR sing 21 n n C23 N31 0MR sing 22 n n C23 C25 0MR sing 23 n n N31 C24 0MR sing 24 n n C25 N32 0MR sing 25 n n C24 C26 0MR sing 26 n n N32 C26 0MR sing 27 n n N32 C21 0MR sing 28 n n C21 O36 0MR doub 29 n n C21 C12 0MR sing 30 n n C28 O40 0MR sing 31 n n C6 C2 0MR doub 32 n y C6 C16 0MR sing 33 n y C2 C1 0MR sing 34 n y O40 C16 0MR sing 35 n n C16 C11 0MR doub 36 n y C1 C5 0MR doub 37 n y C12 C18 0MR sing 38 n y C12 C20 0MR doub 39 n y C11 C5 0MR sing 40 n y C11 C18 0MR sing 41 n n C18 N30 0MR doub 42 n y C20 C27 0MR sing 43 n n C20 O39 0MR sing 44 n y N30 O39 0MR sing 45 n y C1 H1 0MR sing 46 n n C2 H2 0MR sing 47 n n C3 H3 0MR sing 48 n n C4 H4 0MR sing 49 n n C5 H5 0MR sing 50 n n C6 H6 0MR sing 51 n n C7 H7 0MR sing 52 n n C8 H8 0MR sing 53 n n C9 H9 0MR sing 54 n n C10 H10 0MR sing 55 n n C23 H11 0MR sing 56 n n C23 H12 0MR sing 57 n n C24 H13 0MR sing 58 n n C24 H14 0MR sing 59 n n C25 H15 0MR sing 60 n n C25 H16 0MR sing 61 n n C26 H17 0MR sing 62 n n C26 H18 0MR sing 63 n n C27 H19 0MR sing 64 n n C27 H20 0MR sing 65 n n C27 H21 0MR sing 66 n n C28 H22 0MR sing 67 n n C28 H23 0MR sing 68 n n C28 H24 0MR sing 69 n n N33 H25 0MR sing 70 n n # _atom_sites.entry_id 4DYN _atom_sites.fract_transf_matrix[1][1] 0.006868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0MR A 1 601 1 0MR LG1 . D 2 0MR B 1 601 1 0MR LG1 . E 3 HOH A 1 701 4 HOH HOH . E 3 HOH A 2 702 5 HOH HOH . E 3 HOH A 3 703 7 HOH HOH . E 3 HOH A 4 704 8 HOH HOH . E 3 HOH A 5 705 9 HOH HOH . E 3 HOH A 6 706 12 HOH HOH . E 3 HOH A 7 707 14 HOH HOH . E 3 HOH A 8 708 15 HOH HOH . E 3 HOH A 9 709 16 HOH HOH . E 3 HOH A 10 710 17 HOH HOH . E 3 HOH A 11 711 18 HOH HOH . E 3 HOH A 12 712 19 HOH HOH . E 3 HOH A 13 713 20 HOH HOH . E 3 HOH A 14 714 21 HOH HOH . E 3 HOH A 15 715 22 HOH HOH . E 3 HOH A 16 716 23 HOH HOH . E 3 HOH A 17 717 24 HOH HOH . E 3 HOH A 18 718 25 HOH HOH . E 3 HOH A 19 719 26 HOH HOH . E 3 HOH A 20 720 27 HOH HOH . E 3 HOH A 21 721 28 HOH HOH . E 3 HOH A 22 722 29 HOH HOH . E 3 HOH A 23 723 30 HOH HOH . E 3 HOH A 24 724 33 HOH HOH . E 3 HOH A 25 725 34 HOH HOH . E 3 HOH A 26 726 35 HOH HOH . E 3 HOH A 27 727 36 HOH HOH . E 3 HOH A 28 728 38 HOH HOH . E 3 HOH A 29 729 39 HOH HOH . E 3 HOH A 30 730 45 HOH HOH . E 3 HOH A 31 731 46 HOH HOH . E 3 HOH A 32 732 47 HOH HOH . E 3 HOH A 33 733 48 HOH HOH . E 3 HOH A 34 734 49 HOH HOH . E 3 HOH A 35 735 52 HOH HOH . E 3 HOH A 36 736 53 HOH HOH . E 3 HOH A 37 737 54 HOH HOH . E 3 HOH A 38 738 55 HOH HOH . E 3 HOH A 39 739 56 HOH HOH . E 3 HOH A 40 740 57 HOH HOH . E 3 HOH A 41 741 59 HOH HOH . E 3 HOH A 42 742 60 HOH HOH . E 3 HOH A 43 743 61 HOH HOH . E 3 HOH A 44 744 62 HOH HOH . E 3 HOH A 45 745 63 HOH HOH . E 3 HOH A 46 746 64 HOH HOH . E 3 HOH A 47 747 65 HOH HOH . E 3 HOH A 48 748 66 HOH HOH . E 3 HOH A 49 749 70 HOH HOH . E 3 HOH A 50 750 72 HOH HOH . E 3 HOH A 51 751 73 HOH HOH . E 3 HOH A 52 752 78 HOH HOH . E 3 HOH A 53 753 80 HOH HOH . E 3 HOH A 54 754 83 HOH HOH . E 3 HOH A 55 755 84 HOH HOH . E 3 HOH A 56 756 85 HOH HOH . E 3 HOH A 57 757 86 HOH HOH . E 3 HOH A 58 758 87 HOH HOH . E 3 HOH A 59 759 89 HOH HOH . E 3 HOH A 60 760 90 HOH HOH . E 3 HOH A 61 761 91 HOH HOH . E 3 HOH A 62 762 93 HOH HOH . E 3 HOH A 63 763 94 HOH HOH . E 3 HOH A 64 764 95 HOH HOH . F 3 HOH B 1 701 1 HOH HOH . F 3 HOH B 2 702 2 HOH HOH . F 3 HOH B 3 703 3 HOH HOH . F 3 HOH B 4 704 6 HOH HOH . F 3 HOH B 5 705 10 HOH HOH . F 3 HOH B 6 706 11 HOH HOH . F 3 HOH B 7 707 13 HOH HOH . F 3 HOH B 8 708 31 HOH HOH . F 3 HOH B 9 709 32 HOH HOH . F 3 HOH B 10 710 37 HOH HOH . F 3 HOH B 11 711 40 HOH HOH . F 3 HOH B 12 712 41 HOH HOH . F 3 HOH B 13 713 42 HOH HOH . F 3 HOH B 14 714 43 HOH HOH . F 3 HOH B 15 715 44 HOH HOH . F 3 HOH B 16 716 50 HOH HOH . F 3 HOH B 17 717 51 HOH HOH . F 3 HOH B 18 718 58 HOH HOH . F 3 HOH B 19 719 67 HOH HOH . F 3 HOH B 20 720 68 HOH HOH . F 3 HOH B 21 721 69 HOH HOH . F 3 HOH B 22 722 71 HOH HOH . F 3 HOH B 23 723 74 HOH HOH . F 3 HOH B 24 724 75 HOH HOH . F 3 HOH B 25 725 76 HOH HOH . F 3 HOH B 26 726 77 HOH HOH . F 3 HOH B 27 727 79 HOH HOH . F 3 HOH B 28 728 81 HOH HOH . F 3 HOH B 29 729 82 HOH HOH . F 3 HOH B 30 730 88 HOH HOH . F 3 HOH B 31 731 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 0MR . . . C 2 25.764 -33.363 21.26 1 29.2 ? C1 0MR 601 A 1 HETATM 2 C C2 0MR . . . C 2 26.813 -34.068 20.67 1 28.78 ? C2 0MR 601 A 1 HETATM 3 C C3 0MR . . . C 2 32.165 -37.148 13.94 1 31.23 ? C3 0MR 601 A 1 HETATM 4 C C4 0MR . . . C 2 32.588 -36.142 13.079 1 31.3 ? C4 0MR 601 A 1 HETATM 5 C C5 0MR . . . C 2 24.635 -34.044 21.717 1 28.96 ? C5 0MR 601 A 1 HETATM 6 C C6 0MR . . . C 2 26.733 -35.453 20.539 1 28.89 ? C6 0MR 601 A 1 HETATM 7 C C7 0MR . . . C 2 30.901 -37.077 14.516 1 31.14 ? C7 0MR 601 A 1 HETATM 8 C C8 0MR . . . C 2 25.994 -35.026 15.62 1 31.16 ? C8 0MR 601 A 1 HETATM 9 C C9 0MR . . . C 2 25.014 -32.633 14.555 1 31.13 ? C9 0MR 601 A 1 HETATM 10 C C10 0MR . . . C 2 31.717 -35.091 12.828 1 31.28 ? C10 0MR 601 A 1 HETATM 11 C C11 0MR . . . C 2 24.556 -35.431 21.583 1 28.99 ? C11 0MR 601 A 1 HETATM 12 C C12 0MR . . . C 2 22.604 -37.092 21.408 1 28.95 ? C12 0MR 601 A 1 HETATM 13 C C13 0MR . . . C 2 24.714 -34.579 15.961 1 31.22 ? C13 0MR 601 A 1 HETATM 14 C C14 0MR . . . C 2 26.775 -34.272 14.742 1 31.24 ? C14 0MR 601 A 1 HETATM 15 C C15 0MR . . . C 2 26.283 -33.082 14.219 1 31.25 ? C15 0MR 601 A 1 HETATM 16 C C16 0MR . . . C 2 25.606 -36.136 20.997 1 28.96 ? C16 0MR 601 A 1 HETATM 17 C C17 0MR . . . C 2 24.232 -33.378 15.425 1 31.13 ? C17 0MR 601 A 1 HETATM 18 C C18 0MR . . . C 2 23.378 -36.108 22.062 1 28.79 ? C18 0MR 601 A 1 HETATM 19 C C19 0MR . . . C 2 30.105 -35.988 14.204 1 31.16 ? C19 0MR 601 A 1 HETATM 20 C C20 0MR . . . C 2 21.617 -37.375 22.316 1 28.85 ? C20 0MR 601 A 1 HETATM 21 C C21 0MR . . . C 2 22.758 -37.727 20.087 1 29.56 ? C21 0MR 601 A 1 HETATM 22 C C22 0MR . . . C 2 28.755 -35.858 14.784 1 31.23 ? C22 0MR 601 A 1 HETATM 23 C C23 0MR . . . C 2 24.123 -36.81 16.843 1 30.44 ? C23 0MR 601 A 1 HETATM 24 C C24 0MR . . . C 2 23.791 -34.78 18.199 1 30.34 ? C24 0MR 601 A 1 HETATM 25 C C25 0MR . . . C 2 22.954 -37.47 17.571 1 30.32 ? C25 0MR 601 A 1 HETATM 26 C C26 0MR . . . C 2 22.694 -35.487 18.998 1 30.18 ? C26 0MR 601 A 1 HETATM 27 C C27 0MR . . . C 2 20.467 -38.289 22.331 1 28.86 ? C27 0MR 601 A 1 HETATM 28 C C28 0MR . . . C 2 26.694 -38.144 20.295 1 29.61 ? C28 0MR 601 A 1 HETATM 29 N N29 0MR . . . C 2 30.483 -34.991 13.372 1 31.21 ? N29 0MR 601 A 1 HETATM 30 N N30 0MR . . . C 2 22.9 -35.803 23.269 1 28.76 ? N30 0MR 601 A 1 HETATM 31 N N31 0MR . . . C 2 23.955 -35.353 16.852 1 31 ? N31 0MR 601 A 1 HETATM 32 N N32 0MR . . . C 2 22.808 -36.943 18.93 1 29.98 ? N32 0MR 601 A 1 HETATM 33 N N33 0MR . . . C 2 28.055 -34.707 14.389 1 31.18 ? N33 0MR 601 A 1 HETATM 34 N N34 0MR . . . C 2 27.066 -32.303 13.331 1 31.36 ? N34 0MR 601 A 1 HETATM 35 O O35 0MR . . . C 2 26.561 -31.264 12.841 1 32.01 ? O35 0MR 601 A 1 HETATM 36 O O36 0MR . . . C 2 22.834 -38.955 20.09 1 29.63 ? O36 0MR 601 A 1 HETATM 37 O O37 0MR . . . C 2 28.306 -36.704 15.552 1 31.33 ? O37 0MR 601 A 1 HETATM 38 O O38 0MR . . . C 2 28.098 -32.834 12.863 1 32.47 ? O38 0MR 601 A 1 HETATM 39 O O39 0MR . . . C 2 21.779 -36.609 23.424 1 29.31 ? O39 0MR 601 A 1 HETATM 40 O O40 0MR . . . C 2 25.555 -37.496 20.862 1 29.84 ? O40 0MR 601 A 1 HETATM 41 CL CL4 0MR . . . C 2 22.673 -32.738 15.789 1 31.17 ? CL4 0MR 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #