data_4DYN
#
_model_server_result.job_id            VLTzuH4nveDQy0Q0hk0o7Q 
_model_server_result.datetime_utc      '2025-03-05 01:36:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dyn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    4DYN 
#
_exptl.entry_id    4DYN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              576.988 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]pyridine-2-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4DYN 
_cell.length_a            145.61 
_cell.length_b            145.61 
_cell.length_c            145.61 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DYN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 software_defined_assembly 1 
PISA trimeric 3 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1,2,3 
B,D,F 2 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -72.805 -72.805 
3 'crystal symmetry operation' 11_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 72.805 -72.805 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H25 Cl N6 O6' 
_chem_comp.formula_weight    576.988 
_chem_comp.id                0MR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]pyridine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C10 C4 0MR doub 1 n y 
C10 N29 0MR sing 2 n y 
O35 N34 0MR sing 3 n n 
O38 N34 0MR doub 4 n n 
C4 C3 0MR sing 5 n y 
N34 C15 0MR sing 6 n n 
N29 C19 0MR doub 7 n y 
C3 C7 0MR doub 8 n y 
C19 C7 0MR sing 9 n y 
C19 C22 0MR sing 10 n n 
C15 C9 0MR doub 11 n y 
C15 C14 0MR sing 12 n y 
N33 C14 0MR sing 13 n n 
N33 C22 0MR sing 14 n n 
C9 C17 0MR sing 15 n y 
C14 C8 0MR doub 16 n y 
C22 O37 0MR doub 17 n n 
C17 CL4 0MR sing 18 n n 
C17 C13 0MR doub 19 n y 
C8 C13 0MR sing 20 n y 
C13 N31 0MR sing 21 n n 
C23 N31 0MR sing 22 n n 
C23 C25 0MR sing 23 n n 
N31 C24 0MR sing 24 n n 
C25 N32 0MR sing 25 n n 
C24 C26 0MR sing 26 n n 
N32 C26 0MR sing 27 n n 
N32 C21 0MR sing 28 n n 
C21 O36 0MR doub 29 n n 
C21 C12 0MR sing 30 n n 
C28 O40 0MR sing 31 n n 
C6 C2 0MR doub 32 n y 
C6 C16 0MR sing 33 n y 
C2 C1 0MR sing 34 n y 
O40 C16 0MR sing 35 n n 
C16 C11 0MR doub 36 n y 
C1 C5 0MR doub 37 n y 
C12 C18 0MR sing 38 n y 
C12 C20 0MR doub 39 n y 
C11 C5 0MR sing 40 n y 
C11 C18 0MR sing 41 n n 
C18 N30 0MR doub 42 n y 
C20 C27 0MR sing 43 n n 
C20 O39 0MR sing 44 n y 
N30 O39 0MR sing 45 n y 
C1 H1 0MR sing 46 n n 
C2 H2 0MR sing 47 n n 
C3 H3 0MR sing 48 n n 
C4 H4 0MR sing 49 n n 
C5 H5 0MR sing 50 n n 
C6 H6 0MR sing 51 n n 
C7 H7 0MR sing 52 n n 
C8 H8 0MR sing 53 n n 
C9 H9 0MR sing 54 n n 
C10 H10 0MR sing 55 n n 
C23 H11 0MR sing 56 n n 
C23 H12 0MR sing 57 n n 
C24 H13 0MR sing 58 n n 
C24 H14 0MR sing 59 n n 
C25 H15 0MR sing 60 n n 
C25 H16 0MR sing 61 n n 
C26 H17 0MR sing 62 n n 
C26 H18 0MR sing 63 n n 
C27 H19 0MR sing 64 n n 
C27 H20 0MR sing 65 n n 
C27 H21 0MR sing 66 n n 
C28 H22 0MR sing 67 n n 
C28 H23 0MR sing 68 n n 
C28 H24 0MR sing 69 n n 
N33 H25 0MR sing 70 n n 
#
_atom_sites.entry_id                     4DYN 
_atom_sites.fract_transf_matrix[1][1]    0.006868 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006868 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0MR A 1 601 1 0MR LG1 . 
D 2 0MR B 1 601 1 0MR LG1 . 
E 3 HOH A 1 701 4 HOH HOH . 
E 3 HOH A 2 702 5 HOH HOH . 
E 3 HOH A 3 703 7 HOH HOH . 
E 3 HOH A 4 704 8 HOH HOH . 
E 3 HOH A 5 705 9 HOH HOH . 
E 3 HOH A 6 706 12 HOH HOH . 
E 3 HOH A 7 707 14 HOH HOH . 
E 3 HOH A 8 708 15 HOH HOH . 
E 3 HOH A 9 709 16 HOH HOH . 
E 3 HOH A 10 710 17 HOH HOH . 
E 3 HOH A 11 711 18 HOH HOH . 
E 3 HOH A 12 712 19 HOH HOH . 
E 3 HOH A 13 713 20 HOH HOH . 
E 3 HOH A 14 714 21 HOH HOH . 
E 3 HOH A 15 715 22 HOH HOH . 
E 3 HOH A 16 716 23 HOH HOH . 
E 3 HOH A 17 717 24 HOH HOH . 
E 3 HOH A 18 718 25 HOH HOH . 
E 3 HOH A 19 719 26 HOH HOH . 
E 3 HOH A 20 720 27 HOH HOH . 
E 3 HOH A 21 721 28 HOH HOH . 
E 3 HOH A 22 722 29 HOH HOH . 
E 3 HOH A 23 723 30 HOH HOH . 
E 3 HOH A 24 724 33 HOH HOH . 
E 3 HOH A 25 725 34 HOH HOH . 
E 3 HOH A 26 726 35 HOH HOH . 
E 3 HOH A 27 727 36 HOH HOH . 
E 3 HOH A 28 728 38 HOH HOH . 
E 3 HOH A 29 729 39 HOH HOH . 
E 3 HOH A 30 730 45 HOH HOH . 
E 3 HOH A 31 731 46 HOH HOH . 
E 3 HOH A 32 732 47 HOH HOH . 
E 3 HOH A 33 733 48 HOH HOH . 
E 3 HOH A 34 734 49 HOH HOH . 
E 3 HOH A 35 735 52 HOH HOH . 
E 3 HOH A 36 736 53 HOH HOH . 
E 3 HOH A 37 737 54 HOH HOH . 
E 3 HOH A 38 738 55 HOH HOH . 
E 3 HOH A 39 739 56 HOH HOH . 
E 3 HOH A 40 740 57 HOH HOH . 
E 3 HOH A 41 741 59 HOH HOH . 
E 3 HOH A 42 742 60 HOH HOH . 
E 3 HOH A 43 743 61 HOH HOH . 
E 3 HOH A 44 744 62 HOH HOH . 
E 3 HOH A 45 745 63 HOH HOH . 
E 3 HOH A 46 746 64 HOH HOH . 
E 3 HOH A 47 747 65 HOH HOH . 
E 3 HOH A 48 748 66 HOH HOH . 
E 3 HOH A 49 749 70 HOH HOH . 
E 3 HOH A 50 750 72 HOH HOH . 
E 3 HOH A 51 751 73 HOH HOH . 
E 3 HOH A 52 752 78 HOH HOH . 
E 3 HOH A 53 753 80 HOH HOH . 
E 3 HOH A 54 754 83 HOH HOH . 
E 3 HOH A 55 755 84 HOH HOH . 
E 3 HOH A 56 756 85 HOH HOH . 
E 3 HOH A 57 757 86 HOH HOH . 
E 3 HOH A 58 758 87 HOH HOH . 
E 3 HOH A 59 759 89 HOH HOH . 
E 3 HOH A 60 760 90 HOH HOH . 
E 3 HOH A 61 761 91 HOH HOH . 
E 3 HOH A 62 762 93 HOH HOH . 
E 3 HOH A 63 763 94 HOH HOH . 
E 3 HOH A 64 764 95 HOH HOH . 
F 3 HOH B 1 701 1 HOH HOH . 
F 3 HOH B 2 702 2 HOH HOH . 
F 3 HOH B 3 703 3 HOH HOH . 
F 3 HOH B 4 704 6 HOH HOH . 
F 3 HOH B 5 705 10 HOH HOH . 
F 3 HOH B 6 706 11 HOH HOH . 
F 3 HOH B 7 707 13 HOH HOH . 
F 3 HOH B 8 708 31 HOH HOH . 
F 3 HOH B 9 709 32 HOH HOH . 
F 3 HOH B 10 710 37 HOH HOH . 
F 3 HOH B 11 711 40 HOH HOH . 
F 3 HOH B 12 712 41 HOH HOH . 
F 3 HOH B 13 713 42 HOH HOH . 
F 3 HOH B 14 714 43 HOH HOH . 
F 3 HOH B 15 715 44 HOH HOH . 
F 3 HOH B 16 716 50 HOH HOH . 
F 3 HOH B 17 717 51 HOH HOH . 
F 3 HOH B 18 718 58 HOH HOH . 
F 3 HOH B 19 719 67 HOH HOH . 
F 3 HOH B 20 720 68 HOH HOH . 
F 3 HOH B 21 721 69 HOH HOH . 
F 3 HOH B 22 722 71 HOH HOH . 
F 3 HOH B 23 723 74 HOH HOH . 
F 3 HOH B 24 724 75 HOH HOH . 
F 3 HOH B 25 725 76 HOH HOH . 
F 3 HOH B 26 726 77 HOH HOH . 
F 3 HOH B 27 727 79 HOH HOH . 
F 3 HOH B 28 728 81 HOH HOH . 
F 3 HOH B 29 729 82 HOH HOH . 
F 3 HOH B 30 730 88 HOH HOH . 
F 3 HOH B 31 731 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 0MR . . . D 2 0.211 -29.191 14.101 1 32.23 ? C1 0MR 601 B 1 
HETATM 2 C C2 0MR . . . D 2 -0.706 -29.945 13.366 1 32.26 ? C2 0MR 601 B 1 
HETATM 3 C C3 0MR . . . D 2 -5.117 -37.29 10.234 1 35.12 ? C3 0MR 601 B 1 
HETATM 4 C C4 0MR . . . D 2 -5.583 -38.118 11.25 1 35.19 ? C4 0MR 601 B 1 
HETATM 5 C C5 0MR . . . D 2 1.341 -28.665 13.469 1 32.4 ? C5 0MR 601 B 1 
HETATM 6 C C6 0MR . . . D 2 -0.494 -30.173 12.005 1 32.01 ? C6 0MR 601 B 1 
HETATM 7 C C7 0MR . . . D 2 -3.922 -36.596 10.404 1 35.2 ? C7 0MR 601 B 1 
HETATM 8 C C8 0MR . . . D 2 0.596 -34.902 12.807 1 35.13 ? C8 0MR 601 B 1 
HETATM 9 C C9 0MR . . . D 2 1.493 -35.637 15.346 1 35.19 ? C9 0MR 601 B 1 
HETATM 10 C C10 0MR . . . D 2 -4.818 -38.22 12.404 1 35.15 ? C10 0MR 601 B 1 
HETATM 11 C C11 0MR . . . D 2 1.557 -28.895 12.108 1 32.06 ? C11 0MR 601 B 1 
HETATM 12 C C12 0MR . . . D 2 3.623 -28.955 10.581 1 32.19 ? C12 0MR 601 B 1 
HETATM 13 C C13 0MR . . . D 2 1.794 -34.382 13.3 1 35.09 ? C13 0MR 601 B 1 
HETATM 14 C C14 0MR . . . D 2 -0.151 -35.792 13.582 1 35.18 ? C14 0MR 601 B 1 
HETATM 15 C C15 0MR . . . D 2 0.3 -36.155 14.85 1 35.2 ? C15 0MR 601 B 1 
HETATM 16 C C16 0MR . . . D 2 0.636 -29.648 11.374 1 32.08 ? C16 0MR 601 B 1 
HETATM 17 C C17 0MR . . . D 2 2.236 -34.75 14.573 1 35.09 ? C17 0MR 601 B 1 
HETATM 18 C C18 0MR . . . D 2 2.734 -28.335 11.485 1 32.22 ? C18 0MR 601 B 1 
HETATM 19 C C19 0MR . . . D 2 -3.228 -36.763 11.594 1 35.15 ? C19 0MR 601 B 1 
HETATM 20 C C20 0MR . . . D 2 4.544 -27.971 10.315 1 31.86 ? C20 0MR 601 B 1 
HETATM 21 C C21 0MR . . . D 2 3.618 -30.314 10.007 1 33.12 ? C21 0MR 601 B 1 
HETATM 22 C C22 0MR . . . D 2 -1.951 -36.055 11.828 1 35.23 ? C22 0MR 601 B 1 
HETATM 23 C C23 0MR . . . D 2 2.481 -33.62 11.042 1 34.66 ? C23 0MR 601 B 1 
HETATM 24 C C24 0MR . . . D 2 2.544 -32.089 12.984 1 34.66 ? C24 0MR 601 B 1 
HETATM 25 C C25 0MR . . . D 2 3.619 -32.825 10.399 1 34.56 ? C25 0MR 601 B 1 
HETATM 26 C C26 0MR . . . D 2 3.64 -31.272 12.303 1 34.25 ? C26 0MR 601 B 1 
HETATM 27 C C27 0MR . . . D 2 5.744 -27.888 9.471 1 31.21 ? C27 0MR 601 B 1 
HETATM 28 C C28 0MR . . . D 2 -0.142 -30.716 9.379 1 31.66 ? C28 0MR 601 B 1 
HETATM 29 N N29 0MR . . . D 2 -3.65 -37.563 12.6 1 35.14 ? N29 0MR 601 B 1 
HETATM 30 N N30 0MR . . . D 2 3.088 -27.076 11.761 1 31.89 ? N30 0MR 601 B 1 
HETATM 31 N N31 0MR . . . D 2 2.52 -33.482 12.504 1 35.07 ? N31 0MR 601 B 1 
HETATM 32 N N32 0MR . . . D 2 3.619 -31.429 10.85 1 34.23 ? N32 0MR 601 B 1 
HETATM 33 N N33 0MR . . . D 2 -1.347 -36.308 13.074 1 35.13 ? N33 0MR 601 B 1 
HETATM 34 N N34 0MR . . . D 2 -0.431 -37.056 15.665 1 35.22 ? N34 0MR 601 B 1 
HETATM 35 O O35 0MR . . . D 2 0.026 -37.323 16.798 1 35.61 ? O35 0MR 601 B 1 
HETATM 36 O O36 0MR . . . D 2 3.614 -30.381 8.78 1 33.34 ? O36 0MR 601 B 1 
HETATM 37 O O37 0MR . . . D 2 -1.467 -35.303 10.982 1 35.2 ? O37 0MR 601 B 1 
HETATM 38 O O38 0MR . . . D 2 -1.302 -37.77 15.117 1 36.79 ? O38 0MR 601 B 1 
HETATM 39 O O39 0MR . . . D 2 4.235 -26.847 11.015 1 31.74 ? O39 0MR 601 B 1 
HETATM 40 O O40 0MR . . . D 2 0.814 -29.887 10.038 1 32.32 ? O40 0MR 601 B 1 
HETATM 41 CL CL4 0MR . . . D 2 3.701 -34.148 15.258 1 35.04 ? CL4 0MR 601 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           41 
#