data_4DYV # _model_server_result.job_id C0fiY5ib1GQIX4hi2goXiQ _model_server_result.datetime_utc '2025-08-09 10:55:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4dyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4DYV # _exptl.entry_id 4DYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4DYV _cell.length_a 71.901 _cell.length_b 83.046 _cell.length_c 93.503 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4DYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2,3,4 A,B,C 2 1,3 A,B,C 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 71.901 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 71.901 0 93.503 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 93.503 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 118 A PRO 118 1_555 A N MSE 119 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C MSE 119 A MSE 119 1_555 A N GLU 120 A GLU 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 A C VAL 148 A VAL 148 1_555 A N MSE 149 A MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale4 A C MSE 149 A MSE 149 1_555 A N LYS 150 A LYS 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale5 A C MSE 235 A MSE 235 1_555 A N ASP 236 A ASP 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale6 A C TYR 246 A TYR 246 1_555 A N MSE 247 A MSE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C MSE 247 A MSE 247 1_555 A N ALA 248 A ALA 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale8 A C PHE 258 A PHE 258 1_555 A N MSE 259 A MSE 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 A C MSE 259 A MSE 259 1_555 A N THR 260 A THR 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale10 A C ILE 261 A ILE 261 1_555 A N MSE 262 A MSE 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C MSE 262 A MSE 262 1_555 A N ALA 263 A ALA 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4DYV _atom_sites.fract_transf_matrix[1][1] 0.013908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010695 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 301 1 CL CL . C 3 HOH A 1 401 2 HOH HOH . C 3 HOH A 2 402 4 HOH HOH . C 3 HOH A 3 403 5 HOH HOH . C 3 HOH A 4 404 6 HOH HOH . C 3 HOH A 5 405 7 HOH HOH . C 3 HOH A 6 406 8 HOH HOH . C 3 HOH A 7 407 9 HOH HOH . C 3 HOH A 8 408 10 HOH HOH . C 3 HOH A 9 409 11 HOH HOH . C 3 HOH A 10 410 12 HOH HOH . C 3 HOH A 11 411 13 HOH HOH . C 3 HOH A 12 412 14 HOH HOH . C 3 HOH A 13 413 15 HOH HOH . C 3 HOH A 14 414 16 HOH HOH . C 3 HOH A 15 415 17 HOH HOH . C 3 HOH A 16 416 18 HOH HOH . C 3 HOH A 17 417 19 HOH HOH . C 3 HOH A 18 418 20 HOH HOH . C 3 HOH A 19 419 21 HOH HOH . C 3 HOH A 20 420 22 HOH HOH . C 3 HOH A 21 421 23 HOH HOH . C 3 HOH A 22 422 25 HOH HOH . C 3 HOH A 23 423 26 HOH HOH . C 3 HOH A 24 424 27 HOH HOH . C 3 HOH A 25 425 28 HOH HOH . C 3 HOH A 26 426 29 HOH HOH . C 3 HOH A 27 427 30 HOH HOH . C 3 HOH A 28 428 31 HOH HOH . C 3 HOH A 29 429 32 HOH HOH . C 3 HOH A 30 430 33 HOH HOH . C 3 HOH A 31 431 34 HOH HOH . C 3 HOH A 32 432 35 HOH HOH . C 3 HOH A 33 433 36 HOH HOH . C 3 HOH A 34 434 37 HOH HOH . C 3 HOH A 35 435 38 HOH HOH . C 3 HOH A 36 436 39 HOH HOH . C 3 HOH A 37 437 40 HOH HOH . C 3 HOH A 38 438 41 HOH HOH . C 3 HOH A 39 439 42 HOH HOH . C 3 HOH A 40 440 43 HOH HOH . C 3 HOH A 41 441 44 HOH HOH . C 3 HOH A 42 442 45 HOH HOH . C 3 HOH A 43 443 46 HOH HOH . C 3 HOH A 44 444 47 HOH HOH . C 3 HOH A 45 445 48 HOH HOH . C 3 HOH A 46 446 49 HOH HOH . C 3 HOH A 47 447 51 HOH HOH . C 3 HOH A 48 448 52 HOH HOH . C 3 HOH A 49 449 53 HOH HOH . C 3 HOH A 50 450 54 HOH HOH . C 3 HOH A 51 451 55 HOH HOH . C 3 HOH A 52 452 57 HOH HOH . C 3 HOH A 53 453 58 HOH HOH . C 3 HOH A 54 454 59 HOH HOH . C 3 HOH A 55 455 61 HOH HOH . C 3 HOH A 56 456 62 HOH HOH . C 3 HOH A 57 457 63 HOH HOH . C 3 HOH A 58 458 64 HOH HOH . C 3 HOH A 59 459 65 HOH HOH . C 3 HOH A 60 460 66 HOH HOH . C 3 HOH A 61 461 67 HOH HOH . C 3 HOH A 62 462 68 HOH HOH . C 3 HOH A 63 463 69 HOH HOH . C 3 HOH A 64 464 70 HOH HOH . C 3 HOH A 65 465 71 HOH HOH . C 3 HOH A 66 466 72 HOH HOH . C 3 HOH A 67 467 73 HOH HOH . C 3 HOH A 68 468 74 HOH HOH . C 3 HOH A 69 469 75 HOH HOH . C 3 HOH A 70 470 76 HOH HOH . C 3 HOH A 71 471 77 HOH HOH . C 3 HOH A 72 472 78 HOH HOH . C 3 HOH A 73 473 79 HOH HOH . C 3 HOH A 74 474 80 HOH HOH . C 3 HOH A 75 475 81 HOH HOH . C 3 HOH A 76 476 82 HOH HOH . C 3 HOH A 77 477 83 HOH HOH . C 3 HOH A 78 478 84 HOH HOH . C 3 HOH A 79 479 85 HOH HOH . C 3 HOH A 80 480 86 HOH HOH . C 3 HOH A 81 481 87 HOH HOH . C 3 HOH A 82 482 88 HOH HOH . C 3 HOH A 83 483 89 HOH HOH . C 3 HOH A 84 484 90 HOH HOH . C 3 HOH A 85 485 91 HOH HOH . C 3 HOH A 86 486 92 HOH HOH . C 3 HOH A 87 487 93 HOH HOH . C 3 HOH A 88 488 94 HOH HOH . C 3 HOH A 89 489 95 HOH HOH . C 3 HOH A 90 490 96 HOH HOH . C 3 HOH A 91 491 97 HOH HOH . C 3 HOH A 92 492 98 HOH HOH . C 3 HOH A 93 493 99 HOH HOH . C 3 HOH A 94 494 100 HOH HOH . C 3 HOH A 95 495 102 HOH HOH . C 3 HOH A 96 496 103 HOH HOH . C 3 HOH A 97 497 104 HOH HOH . C 3 HOH A 98 498 106 HOH HOH . C 3 HOH A 99 499 107 HOH HOH . C 3 HOH A 100 500 109 HOH HOH . C 3 HOH A 101 501 110 HOH HOH . C 3 HOH A 102 502 111 HOH HOH . C 3 HOH A 103 503 112 HOH HOH . C 3 HOH A 104 504 113 HOH HOH . C 3 HOH A 105 505 115 HOH HOH . C 3 HOH A 106 506 116 HOH HOH . C 3 HOH A 107 507 117 HOH HOH . C 3 HOH A 108 508 118 HOH HOH . C 3 HOH A 109 509 119 HOH HOH . C 3 HOH A 110 510 120 HOH HOH . C 3 HOH A 111 511 121 HOH HOH . C 3 HOH A 112 512 122 HOH HOH . C 3 HOH A 113 513 123 HOH HOH . C 3 HOH A 114 514 124 HOH HOH . C 3 HOH A 115 515 125 HOH HOH . C 3 HOH A 116 516 126 HOH HOH . C 3 HOH A 117 517 127 HOH HOH . C 3 HOH A 118 518 130 HOH HOH . C 3 HOH A 119 519 131 HOH HOH . C 3 HOH A 120 520 132 HOH HOH . C 3 HOH A 121 521 133 HOH HOH . C 3 HOH A 122 522 134 HOH HOH . C 3 HOH A 123 523 136 HOH HOH . C 3 HOH A 124 524 138 HOH HOH . C 3 HOH A 125 525 139 HOH HOH . C 3 HOH A 126 526 140 HOH HOH . C 3 HOH A 127 527 141 HOH HOH . C 3 HOH A 128 528 142 HOH HOH . C 3 HOH A 129 529 143 HOH HOH . C 3 HOH A 130 530 144 HOH HOH . C 3 HOH A 131 531 145 HOH HOH . C 3 HOH A 132 532 146 HOH HOH . C 3 HOH A 133 533 148 HOH HOH . C 3 HOH A 134 534 149 HOH HOH . C 3 HOH A 135 535 150 HOH HOH . C 3 HOH A 136 536 151 HOH HOH . C 3 HOH A 137 537 152 HOH HOH . C 3 HOH A 138 538 153 HOH HOH . C 3 HOH A 139 539 154 HOH HOH . C 3 HOH A 140 540 155 HOH HOH . C 3 HOH A 141 541 156 HOH HOH . C 3 HOH A 142 542 157 HOH HOH . C 3 HOH A 143 543 158 HOH HOH . C 3 HOH A 144 544 159 HOH HOH . C 3 HOH A 145 545 160 HOH HOH . C 3 HOH A 146 546 161 HOH HOH . C 3 HOH A 147 547 162 HOH HOH . C 3 HOH A 148 548 165 HOH HOH . C 3 HOH A 149 549 167 HOH HOH . C 3 HOH A 150 550 168 HOH HOH . C 3 HOH A 151 551 169 HOH HOH . C 3 HOH A 152 552 171 HOH HOH . C 3 HOH A 153 553 172 HOH HOH . C 3 HOH A 154 554 174 HOH HOH . C 3 HOH A 155 555 175 HOH HOH . C 3 HOH A 156 556 176 HOH HOH . C 3 HOH A 157 557 178 HOH HOH . C 3 HOH A 158 558 180 HOH HOH . C 3 HOH A 159 559 181 HOH HOH . C 3 HOH A 160 560 182 HOH HOH . C 3 HOH A 161 561 183 HOH HOH . C 3 HOH A 162 562 184 HOH HOH . C 3 HOH A 163 563 185 HOH HOH . C 3 HOH A 164 564 186 HOH HOH . C 3 HOH A 165 565 189 HOH HOH . C 3 HOH A 166 566 190 HOH HOH . C 3 HOH A 167 567 191 HOH HOH . C 3 HOH A 168 568 192 HOH HOH . C 3 HOH A 169 569 193 HOH HOH . C 3 HOH A 170 570 196 HOH HOH . C 3 HOH A 171 571 197 HOH HOH . C 3 HOH A 172 572 200 HOH HOH . C 3 HOH A 173 573 201 HOH HOH . C 3 HOH A 174 574 202 HOH HOH . C 3 HOH A 175 575 207 HOH HOH . C 3 HOH A 176 576 209 HOH HOH . C 3 HOH A 177 577 210 HOH HOH . C 3 HOH A 178 578 212 HOH HOH . C 3 HOH A 179 579 214 HOH HOH . C 3 HOH A 180 580 219 HOH HOH . C 3 HOH A 181 581 220 HOH HOH . C 3 HOH A 182 582 221 HOH HOH . C 3 HOH A 183 583 222 HOH HOH . C 3 HOH A 184 584 223 HOH HOH . C 3 HOH A 185 585 224 HOH HOH . C 3 HOH A 186 586 225 HOH HOH . C 3 HOH A 187 587 227 HOH HOH . C 3 HOH A 188 588 228 HOH HOH . C 3 HOH A 189 589 229 HOH HOH . C 3 HOH A 190 590 231 HOH HOH . C 3 HOH A 191 591 232 HOH HOH . C 3 HOH A 192 592 233 HOH HOH . C 3 HOH A 193 593 234 HOH HOH . C 3 HOH A 194 594 236 HOH HOH . C 3 HOH A 195 595 237 HOH HOH . C 3 HOH A 196 596 238 HOH HOH . C 3 HOH A 197 597 239 HOH HOH . C 3 HOH A 198 598 240 HOH HOH . C 3 HOH A 199 599 241 HOH HOH . C 3 HOH A 200 600 242 HOH HOH . C 3 HOH A 201 601 243 HOH HOH . C 3 HOH A 202 602 244 HOH HOH . C 3 HOH A 203 603 245 HOH HOH . C 3 HOH A 204 604 246 HOH HOH . C 3 HOH A 205 605 247 HOH HOH . C 3 HOH A 206 606 249 HOH HOH . C 3 HOH A 207 607 250 HOH HOH . C 3 HOH A 208 608 251 HOH HOH . C 3 HOH A 209 609 253 HOH HOH . C 3 HOH A 210 610 254 HOH HOH . C 3 HOH A 211 611 255 HOH HOH . C 3 HOH A 212 612 256 HOH HOH . C 3 HOH A 213 613 257 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.082 _atom_site.Cartn_y 10.143 _atom_site.Cartn_z 43.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #