data_4DZ2
#
_model_server_result.job_id            4svTYCeJtnrYk3BK5NUlsQ 
_model_server_result.datetime_utc      '2024-11-24 16:57:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4dz2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    4DZ2 
#
_exptl.entry_id    4DZ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          123.05 
_cell.angle_gamma         90 
_cell.entry_id            4DZ2 
_cell.length_a            106.44 
_cell.length_b            49.05 
_cell.length_c            66.64 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4DZ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1,2 
B,E,F,H 2 1,2 
A,B,C,D,E,F,G,H 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 70.096496 0 55.857312 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 112 A ASP 112 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc2 A OD1 ASP 112 A ASP 112 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? 
metalc ? metalc3 A OXT VAL 113 A VAL 113 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc4 D CA CA . A CA 201 1_555 G O HOH . A HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc5 D CA CA . A CA 201 1_555 G O HOH . A HOH 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc6 B OD2 ASP 112 B ASP 112 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? 
metalc ? metalc7 B OD1 ASP 112 B ASP 112 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? 
metalc ? metalc8 B O VAL 113 B VAL 113 1_555 F CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc9 F CA CA . B CA 201 1_555 H O HOH . B HOH 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc10 F CA CA . B CA 201 1_555 H O HOH . B HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4DZ2 
_atom_sites.fract_transf_matrix[1][1]    0.009395 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006112 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020387 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FK5 A 1 200 200 FK5 FK5 . 
D 3 CA A 1 201 201 CA CA . 
E 2 FK5 B 1 200 200 FK5 FK5 . 
F 3 CA B 1 201 201 CA CA . 
G 4 HOH A 1 301 1 HOH HOH . 
G 4 HOH A 2 302 5 HOH HOH . 
G 4 HOH A 3 303 8 HOH HOH . 
G 4 HOH A 4 304 9 HOH HOH . 
G 4 HOH A 5 305 10 HOH HOH . 
G 4 HOH A 6 306 11 HOH HOH . 
G 4 HOH A 7 307 12 HOH HOH . 
G 4 HOH A 8 308 16 HOH HOH . 
G 4 HOH A 9 309 19 HOH HOH . 
G 4 HOH A 10 310 23 HOH HOH . 
G 4 HOH A 11 311 27 HOH HOH . 
G 4 HOH A 12 312 29 HOH HOH . 
G 4 HOH A 13 313 30 HOH HOH . 
G 4 HOH A 14 314 32 HOH HOH . 
G 4 HOH A 15 315 33 HOH HOH . 
G 4 HOH A 16 316 36 HOH HOH . 
G 4 HOH A 17 317 38 HOH HOH . 
G 4 HOH A 18 318 39 HOH HOH . 
G 4 HOH A 19 319 41 HOH HOH . 
G 4 HOH A 20 320 43 HOH HOH . 
G 4 HOH A 21 321 45 HOH HOH . 
G 4 HOH A 22 322 47 HOH HOH . 
G 4 HOH A 23 323 48 HOH HOH . 
G 4 HOH A 24 324 50 HOH HOH . 
G 4 HOH A 25 325 51 HOH HOH . 
G 4 HOH A 26 326 52 HOH HOH . 
G 4 HOH A 27 327 55 HOH HOH . 
G 4 HOH A 28 328 56 HOH HOH . 
G 4 HOH A 29 329 57 HOH HOH . 
G 4 HOH A 30 330 59 HOH HOH . 
G 4 HOH A 31 331 60 HOH HOH . 
G 4 HOH A 32 332 64 HOH HOH . 
G 4 HOH A 33 333 66 HOH HOH . 
G 4 HOH A 34 334 67 HOH HOH . 
G 4 HOH A 35 335 68 HOH HOH . 
G 4 HOH A 36 336 69 HOH HOH . 
G 4 HOH A 37 337 70 HOH HOH . 
G 4 HOH A 38 338 72 HOH HOH . 
G 4 HOH A 39 339 75 HOH HOH . 
G 4 HOH A 40 340 78 HOH HOH . 
G 4 HOH A 41 341 80 HOH HOH . 
G 4 HOH A 42 342 81 HOH HOH . 
G 4 HOH A 43 343 83 HOH HOH . 
G 4 HOH A 44 344 85 HOH HOH . 
G 4 HOH A 45 345 88 HOH HOH . 
G 4 HOH A 46 346 89 HOH HOH . 
G 4 HOH A 47 347 91 HOH HOH . 
G 4 HOH A 48 348 96 HOH HOH . 
G 4 HOH A 49 349 97 HOH HOH . 
G 4 HOH A 50 350 99 HOH HOH . 
G 4 HOH A 51 351 100 HOH HOH . 
G 4 HOH A 52 352 104 HOH HOH . 
G 4 HOH A 53 353 107 HOH HOH . 
G 4 HOH A 54 354 110 HOH HOH . 
G 4 HOH A 55 355 112 HOH HOH . 
G 4 HOH A 56 356 113 HOH HOH . 
G 4 HOH A 57 357 114 HOH HOH . 
G 4 HOH A 58 358 116 HOH HOH . 
G 4 HOH A 59 359 118 HOH HOH . 
G 4 HOH A 60 360 119 HOH HOH . 
G 4 HOH A 61 361 120 HOH HOH . 
G 4 HOH A 62 362 121 HOH HOH . 
G 4 HOH A 63 363 122 HOH HOH . 
G 4 HOH A 64 364 123 HOH HOH . 
G 4 HOH A 65 365 124 HOH HOH . 
G 4 HOH A 66 366 125 HOH HOH . 
G 4 HOH A 67 367 126 HOH HOH . 
G 4 HOH A 68 368 127 HOH HOH . 
G 4 HOH A 69 369 128 HOH HOH . 
G 4 HOH A 70 370 129 HOH HOH . 
G 4 HOH A 71 371 136 HOH HOH . 
G 4 HOH A 72 372 137 HOH HOH . 
G 4 HOH A 73 373 138 HOH HOH . 
G 4 HOH A 74 374 139 HOH HOH . 
G 4 HOH A 75 375 140 HOH HOH . 
G 4 HOH A 76 376 141 HOH HOH . 
G 4 HOH A 77 377 142 HOH HOH . 
G 4 HOH A 78 378 143 HOH HOH . 
G 4 HOH A 79 379 144 HOH HOH . 
G 4 HOH A 80 380 146 HOH HOH . 
G 4 HOH A 81 381 147 HOH HOH . 
G 4 HOH A 82 382 148 HOH HOH . 
G 4 HOH A 83 383 149 HOH HOH . 
G 4 HOH A 84 384 150 HOH HOH . 
G 4 HOH A 85 385 151 HOH HOH . 
G 4 HOH A 86 386 152 HOH HOH . 
G 4 HOH A 87 387 153 HOH HOH . 
G 4 HOH A 88 388 154 HOH HOH . 
G 4 HOH A 89 389 155 HOH HOH . 
G 4 HOH A 90 390 181 HOH HOH . 
G 4 HOH A 91 391 182 HOH HOH . 
G 4 HOH A 92 392 183 HOH HOH . 
G 4 HOH A 93 393 184 HOH HOH . 
G 4 HOH A 94 394 185 HOH HOH . 
G 4 HOH A 95 395 186 HOH HOH . 
G 4 HOH A 96 396 187 HOH HOH . 
G 4 HOH A 97 397 188 HOH HOH . 
G 4 HOH A 98 398 189 HOH HOH . 
G 4 HOH A 99 399 190 HOH HOH . 
G 4 HOH A 100 400 191 HOH HOH . 
G 4 HOH A 101 401 192 HOH HOH . 
G 4 HOH A 102 402 193 HOH HOH . 
G 4 HOH A 103 403 194 HOH HOH . 
G 4 HOH A 104 404 195 HOH HOH . 
G 4 HOH A 105 405 208 HOH HOH . 
G 4 HOH A 106 406 209 HOH HOH . 
G 4 HOH A 107 407 210 HOH HOH . 
G 4 HOH A 108 408 211 HOH HOH . 
G 4 HOH A 109 409 226 HOH HOH . 
G 4 HOH A 110 410 227 HOH HOH . 
G 4 HOH A 111 411 228 HOH HOH . 
G 4 HOH A 112 412 229 HOH HOH . 
G 4 HOH A 113 413 230 HOH HOH . 
G 4 HOH A 114 414 235 HOH HOH . 
G 4 HOH A 115 415 237 HOH HOH . 
H 4 HOH B 1 301 2 HOH HOH . 
H 4 HOH B 2 302 3 HOH HOH . 
H 4 HOH B 3 303 4 HOH HOH . 
H 4 HOH B 4 304 6 HOH HOH . 
H 4 HOH B 5 305 7 HOH HOH . 
H 4 HOH B 6 306 13 HOH HOH . 
H 4 HOH B 7 307 14 HOH HOH . 
H 4 HOH B 8 308 15 HOH HOH . 
H 4 HOH B 9 309 17 HOH HOH . 
H 4 HOH B 10 310 18 HOH HOH . 
H 4 HOH B 11 311 20 HOH HOH . 
H 4 HOH B 12 312 21 HOH HOH . 
H 4 HOH B 13 313 22 HOH HOH . 
H 4 HOH B 14 314 24 HOH HOH . 
H 4 HOH B 15 315 25 HOH HOH . 
H 4 HOH B 16 316 26 HOH HOH . 
H 4 HOH B 17 317 28 HOH HOH . 
H 4 HOH B 18 318 31 HOH HOH . 
H 4 HOH B 19 319 34 HOH HOH . 
H 4 HOH B 20 320 35 HOH HOH . 
H 4 HOH B 21 321 37 HOH HOH . 
H 4 HOH B 22 322 40 HOH HOH . 
H 4 HOH B 23 323 42 HOH HOH . 
H 4 HOH B 24 324 44 HOH HOH . 
H 4 HOH B 25 325 46 HOH HOH . 
H 4 HOH B 26 326 49 HOH HOH . 
H 4 HOH B 27 327 53 HOH HOH . 
H 4 HOH B 28 328 54 HOH HOH . 
H 4 HOH B 29 329 58 HOH HOH . 
H 4 HOH B 30 330 61 HOH HOH . 
H 4 HOH B 31 331 62 HOH HOH . 
H 4 HOH B 32 332 63 HOH HOH . 
H 4 HOH B 33 333 65 HOH HOH . 
H 4 HOH B 34 334 71 HOH HOH . 
H 4 HOH B 35 335 73 HOH HOH . 
H 4 HOH B 36 336 74 HOH HOH . 
H 4 HOH B 37 337 76 HOH HOH . 
H 4 HOH B 38 338 77 HOH HOH . 
H 4 HOH B 39 339 79 HOH HOH . 
H 4 HOH B 40 340 82 HOH HOH . 
H 4 HOH B 41 341 84 HOH HOH . 
H 4 HOH B 42 342 86 HOH HOH . 
H 4 HOH B 43 343 87 HOH HOH . 
H 4 HOH B 44 344 90 HOH HOH . 
H 4 HOH B 45 345 92 HOH HOH . 
H 4 HOH B 46 346 93 HOH HOH . 
H 4 HOH B 47 347 94 HOH HOH . 
H 4 HOH B 48 348 95 HOH HOH . 
H 4 HOH B 49 349 98 HOH HOH . 
H 4 HOH B 50 350 101 HOH HOH . 
H 4 HOH B 51 351 102 HOH HOH . 
H 4 HOH B 52 352 103 HOH HOH . 
H 4 HOH B 53 353 105 HOH HOH . 
H 4 HOH B 54 354 106 HOH HOH . 
H 4 HOH B 55 355 108 HOH HOH . 
H 4 HOH B 56 356 109 HOH HOH . 
H 4 HOH B 57 357 111 HOH HOH . 
H 4 HOH B 58 358 115 HOH HOH . 
H 4 HOH B 59 359 117 HOH HOH . 
H 4 HOH B 60 360 130 HOH HOH . 
H 4 HOH B 61 361 131 HOH HOH . 
H 4 HOH B 62 362 132 HOH HOH . 
H 4 HOH B 63 363 133 HOH HOH . 
H 4 HOH B 64 364 134 HOH HOH . 
H 4 HOH B 65 365 135 HOH HOH . 
H 4 HOH B 66 366 145 HOH HOH . 
H 4 HOH B 67 367 156 HOH HOH . 
H 4 HOH B 68 368 157 HOH HOH . 
H 4 HOH B 69 369 158 HOH HOH . 
H 4 HOH B 70 370 159 HOH HOH . 
H 4 HOH B 71 371 160 HOH HOH . 
H 4 HOH B 72 372 161 HOH HOH . 
H 4 HOH B 73 373 162 HOH HOH . 
H 4 HOH B 74 374 163 HOH HOH . 
H 4 HOH B 75 375 164 HOH HOH . 
H 4 HOH B 76 376 165 HOH HOH . 
H 4 HOH B 77 377 166 HOH HOH . 
H 4 HOH B 78 378 167 HOH HOH . 
H 4 HOH B 79 379 168 HOH HOH . 
H 4 HOH B 80 380 169 HOH HOH . 
H 4 HOH B 81 381 170 HOH HOH . 
H 4 HOH B 82 382 171 HOH HOH . 
H 4 HOH B 83 383 172 HOH HOH . 
H 4 HOH B 84 384 173 HOH HOH . 
H 4 HOH B 85 385 174 HOH HOH . 
H 4 HOH B 86 386 175 HOH HOH . 
H 4 HOH B 87 387 176 HOH HOH . 
H 4 HOH B 88 388 177 HOH HOH . 
H 4 HOH B 89 389 178 HOH HOH . 
H 4 HOH B 90 390 179 HOH HOH . 
H 4 HOH B 91 391 180 HOH HOH . 
H 4 HOH B 92 392 196 HOH HOH . 
H 4 HOH B 93 393 197 HOH HOH . 
H 4 HOH B 94 394 198 HOH HOH . 
H 4 HOH B 95 395 199 HOH HOH . 
H 4 HOH B 96 396 200 HOH HOH . 
H 4 HOH B 97 397 201 HOH HOH . 
H 4 HOH B 98 398 202 HOH HOH . 
H 4 HOH B 99 399 203 HOH HOH . 
H 4 HOH B 100 400 204 HOH HOH . 
H 4 HOH B 101 401 205 HOH HOH . 
H 4 HOH B 102 402 206 HOH HOH . 
H 4 HOH B 103 403 207 HOH HOH . 
H 4 HOH B 104 404 212 HOH HOH . 
H 4 HOH B 105 405 213 HOH HOH . 
H 4 HOH B 106 406 214 HOH HOH . 
H 4 HOH B 107 407 215 HOH HOH . 
H 4 HOH B 108 408 216 HOH HOH . 
H 4 HOH B 109 409 217 HOH HOH . 
H 4 HOH B 110 410 218 HOH HOH . 
H 4 HOH B 111 411 219 HOH HOH . 
H 4 HOH B 112 412 220 HOH HOH . 
H 4 HOH B 113 413 221 HOH HOH . 
H 4 HOH B 114 414 222 HOH HOH . 
H 4 HOH B 115 415 223 HOH HOH . 
H 4 HOH B 116 416 224 HOH HOH . 
H 4 HOH B 117 417 225 HOH HOH . 
H 4 HOH B 118 418 231 HOH HOH . 
H 4 HOH B 119 419 232 HOH HOH . 
H 4 HOH B 120 420 233 HOH HOH . 
H 4 HOH B 121 421 234 HOH HOH . 
H 4 HOH B 122 422 236 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               31.276 
_atom_site.Cartn_y               -2.619 
_atom_site.Cartn_z               33.605 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        14.38 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#