data_4E0O # _model_server_result.job_id dBsxokRwokqL-MlRcuBaKQ _model_server_result.datetime_utc '2024-11-05 05:00:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e0o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":101}' # _entry.id 4E0O # _exptl.entry_id 4E0O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.19 _cell.angle_gamma 90 _cell.entry_id 4E0O _cell.length_a 30.41 _cell.length_b 25.43 _cell.length_c 52.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E0O _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,O,P 1 1 C,D,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ORN 1 A ORN 0 1_555 A N SER 2 A SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? covale ? covale2 A NE ORN 1 A ORN 0 1_555 A C LYS 14 A LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale3 A C LYS 8 A LYS 7 1_555 A NE ORN 9 A ORN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? covale ? covale4 A C ORN 9 A ORN 8 1_555 A N GLU 10 A GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale5 A C PHE 11 A PHE 10 1_555 A N HAO 12 A HAO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? covale ? covale6 A C HAO 12 A HAO 11 1_555 A N 4BF 13 A 4BF 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale7 A C 4BF 13 A 4BF 12 1_555 A N LYS 14 A LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 B C ORN 1 B ORN 0 1_555 B N SER 2 B SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale9 B NE ORN 1 B ORN 0 1_555 B C LYS 14 B LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? covale ? covale10 B C LYS 8 B LYS 7 1_555 B NE ORN 9 B ORN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale11 B C ORN 9 B ORN 8 1_555 B N GLU 10 B GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale12 B C PHE 11 B PHE 10 1_555 B N HAO 12 B HAO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale13 B C HAO 12 B HAO 11 1_555 B N 4BF 13 B 4BF 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.303 ? covale ? covale14 B C 4BF 13 B 4BF 12 1_555 B N LYS 14 B LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale15 C C ORN 1 C ORN 0 1_555 C N SER 2 C SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale16 C NE ORN 1 C ORN 0 1_555 C C LYS 14 C LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale17 C C LYS 8 C LYS 7 1_555 C NE ORN 9 C ORN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale18 C C ORN 9 C ORN 8 1_555 C N GLU 10 C GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale19 C C PHE 11 C PHE 10 1_555 C N HAO 12 C HAO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale20 C C HAO 12 C HAO 11 1_555 C N 4BF 13 C 4BF 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.236 ? covale ? covale21 C C 4BF 13 C 4BF 12 1_555 C N LYS 14 C LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale22 D C ORN 1 D ORN 0 1_555 D N SER 2 D SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.516 ? covale ? covale23 D NE ORN 1 D ORN 0 1_555 D C LYS 14 D LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale24 D C LYS 8 D LYS 7 1_555 D NE ORN 9 D ORN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale25 D C ORN 9 D ORN 8 1_555 D N GLU 10 D GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.403 ? covale ? covale26 D C PHE 11 D PHE 10 1_555 D N HAO 12 D HAO 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 D C HAO 12 D HAO 11 1_555 D N 4BF 13 D 4BF 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? covale ? covale28 D C 4BF 13 D 4BF 12 1_555 D N LYS 14 D LYS 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 201 n n P O2 PO4 sing 202 n n P O3 PO4 sing 203 n n P O4 PO4 sing 204 n n # _atom_sites.entry_id 4E0O _atom_sites.fract_transf_matrix[1][1] 0.032884 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000683 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.039324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019041 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MPD A 1 101 1 MPD MPD . F 2 MPD A 1 102 1 MPD MPD . G 3 PO4 B 1 101 3 PO4 PO4 . H 2 MPD B 1 102 1 MPD MPD . I 2 MPD B 1 103 1 MPD MPD . J 2 MPD C 1 101 1 MPD MPD . K 3 PO4 D 1 101 1 PO4 PO4 . L 3 PO4 D 1 102 2 PO4 PO4 . M 2 MPD D 1 103 1 MPD MPD . N 2 MPD D 1 104 1 MPD MPD . O 4 HOH A 1 201 3 HOH HOH . O 4 HOH A 2 202 4 HOH HOH . O 4 HOH A 3 203 6 HOH HOH . O 4 HOH A 4 204 7 HOH HOH . O 4 HOH A 5 205 11 HOH HOH . O 4 HOH A 6 206 17 HOH HOH . O 4 HOH A 7 207 19 HOH HOH . O 4 HOH A 8 208 33 HOH HOH . O 4 HOH A 9 209 37 HOH HOH . O 4 HOH A 10 210 42 HOH HOH . O 4 HOH A 11 211 44 HOH HOH . O 4 HOH A 12 212 53 HOH HOH . P 4 HOH B 1 201 2 HOH HOH . P 4 HOH B 2 202 8 HOH HOH . P 4 HOH B 3 203 10 HOH HOH . P 4 HOH B 4 204 13 HOH HOH . P 4 HOH B 5 205 15 HOH HOH . P 4 HOH B 6 206 20 HOH HOH . P 4 HOH B 7 207 23 HOH HOH . P 4 HOH B 8 208 25 HOH HOH . P 4 HOH B 9 209 28 HOH HOH . P 4 HOH B 10 210 29 HOH HOH . P 4 HOH B 11 211 30 HOH HOH . P 4 HOH B 12 212 34 HOH HOH . P 4 HOH B 13 213 40 HOH HOH . P 4 HOH B 14 214 46 HOH HOH . P 4 HOH B 15 215 47 HOH HOH . P 4 HOH B 16 216 49 HOH HOH . Q 4 HOH C 1 201 1 HOH HOH . Q 4 HOH C 2 202 9 HOH HOH . Q 4 HOH C 3 203 16 HOH HOH . Q 4 HOH C 4 204 18 HOH HOH . Q 4 HOH C 5 205 22 HOH HOH . Q 4 HOH C 6 206 26 HOH HOH . Q 4 HOH C 7 207 32 HOH HOH . Q 4 HOH C 8 208 41 HOH HOH . Q 4 HOH C 9 209 45 HOH HOH . R 4 HOH D 1 201 5 HOH HOH . R 4 HOH D 2 202 12 HOH HOH . R 4 HOH D 3 203 14 HOH HOH . R 4 HOH D 4 204 27 HOH HOH . R 4 HOH D 5 205 35 HOH HOH . R 4 HOH D 6 206 36 HOH HOH . R 4 HOH D 7 207 38 HOH HOH . R 4 HOH D 8 208 39 HOH HOH . R 4 HOH D 9 209 43 HOH HOH . R 4 HOH D 10 210 48 HOH HOH . R 4 HOH D 11 211 50 HOH HOH . R 4 HOH D 12 212 51 HOH HOH . R 4 HOH D 13 213 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . K 3 -5.223 9.085 -9.945 0.5 25.15 ? P PO4 101 D 1 HETATM 2 O O1 PO4 . . . K 3 -4.266 10.315 -10.015 0.5 30.27 ? O1 PO4 101 D 1 HETATM 3 O O2 PO4 . . . K 3 -6.703 9.464 -10.34 0.5 31.11 ? O2 PO4 101 D 1 HETATM 4 O O3 PO4 . . . K 3 -4.738 7.994 -10.996 0.5 30.67 ? O3 PO4 101 D 1 HETATM 5 O O4 PO4 . . . K 3 -5.25 8.542 -8.456 0.5 22.08 ? O4 PO4 101 D 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #