data_4E0U
#
_model_server_result.job_id            9C9S8jgph_gAebpV38zwzQ 
_model_server_result.datetime_utc      '2024-11-26 12:42:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4e0u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    4E0U 
#
_exptl.entry_id    4E0U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              193.033 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIHYDROGEN THIODIPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4E0U 
_cell.length_a            137.73 
_cell.length_b            137.73 
_cell.length_c            170.51 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4E0U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,N 1 1,2 
B,I,J,K,L,M,O 2 1,2 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LEU 357 A LEU 369 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc2 A O ILE 360 A ILE 372 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc3 A OE2 GLU 362 A GLU 374 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc4 A O THR 402 A THR 414 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc5 A O GLN 405 A GLN 417 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
#
_chem_comp.formula           'H3 O6 P2 S -1' 
_chem_comp.formula_weight    193.033 
_chem_comp.id                PIS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIHYDROGEN THIODIPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     THIOPYROPHOSPHATE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1 PIS sing 320 n n 
P1 O2 PIS sing 321 n n 
P1 O3 PIS sing 322 n n 
P1 O5 PIS doub 323 n n 
O1 P2 PIS sing 324 n n 
P2 S1 PIS sing 325 n n 
P2 O4 PIS sing 326 n n 
P2 O6 PIS doub 327 n n 
O2 HO2 PIS sing 328 n n 
O3 HO3 PIS sing 329 n n 
O4 HO4 PIS sing 330 n n 
#
_atom_sites.entry_id                     4E0U 
_atom_sites.fract_transf_matrix[1][1]    0.007261 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007261 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005865 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0MV A 1 501 501 0MV 0MV . 
D 3 PIS A 1 502 502 PIS PIS . 
E 4 IMD A 1 503 503 IMD IMD . 
F 5 EDO A 1 504 504 EDO EDO . 
G 6 NA A 1 505 505 NA NA . 
H 5 EDO A 1 506 506 EDO EDO . 
I 2 0MV B 1 501 501 0MV 0MV . 
J 3 PIS B 1 502 502 PIS PIS . 
K 5 EDO B 1 503 503 EDO EDO . 
L 4 IMD B 1 504 504 IMD IMD . 
M 5 EDO B 1 505 505 EDO EDO . 
N 7 HOH A 1 601 601 HOH HOH . 
N 7 HOH A 2 602 602 HOH HOH . 
N 7 HOH A 3 603 603 HOH HOH . 
N 7 HOH A 4 604 604 HOH HOH . 
N 7 HOH A 5 605 605 HOH HOH . 
N 7 HOH A 6 606 606 HOH HOH . 
N 7 HOH A 7 607 607 HOH HOH . 
N 7 HOH A 8 608 608 HOH HOH . 
N 7 HOH A 9 609 609 HOH HOH . 
N 7 HOH A 10 610 610 HOH HOH . 
N 7 HOH A 11 611 611 HOH HOH . 
N 7 HOH A 12 612 612 HOH HOH . 
N 7 HOH A 13 613 613 HOH HOH . 
N 7 HOH A 14 614 614 HOH HOH . 
N 7 HOH A 15 615 615 HOH HOH . 
N 7 HOH A 16 616 616 HOH HOH . 
N 7 HOH A 17 617 617 HOH HOH . 
N 7 HOH A 18 618 618 HOH HOH . 
N 7 HOH A 19 619 619 HOH HOH . 
N 7 HOH A 20 620 620 HOH HOH . 
N 7 HOH A 21 621 621 HOH HOH . 
N 7 HOH A 22 622 622 HOH HOH . 
O 7 HOH B 1 601 601 HOH HOH . 
O 7 HOH B 2 602 602 HOH HOH . 
O 7 HOH B 3 603 603 HOH HOH . 
O 7 HOH B 4 604 604 HOH HOH . 
O 7 HOH B 5 605 605 HOH HOH . 
O 7 HOH B 6 606 606 HOH HOH . 
O 7 HOH B 7 607 607 HOH HOH . 
O 7 HOH B 8 608 608 HOH HOH . 
O 7 HOH B 9 609 609 HOH HOH . 
O 7 HOH B 10 610 610 HOH HOH . 
O 7 HOH B 11 611 611 HOH HOH . 
O 7 HOH B 12 612 612 HOH HOH . 
O 7 HOH B 13 613 613 HOH HOH . 
O 7 HOH B 14 614 614 HOH HOH . 
O 7 HOH B 15 615 615 HOH HOH . 
O 7 HOH B 16 616 616 HOH HOH . 
O 7 HOH B 17 617 617 HOH HOH . 
O 7 HOH B 18 618 618 HOH HOH . 
O 7 HOH B 19 619 619 HOH HOH . 
O 7 HOH B 20 620 620 HOH HOH . 
O 7 HOH B 21 621 621 HOH HOH . 
O 7 HOH B 22 622 622 HOH HOH . 
O 7 HOH B 23 623 623 HOH HOH . 
O 7 HOH B 24 624 624 HOH HOH . 
O 7 HOH B 25 625 625 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 PIS . . . D 3 12.8 -14.771 -19.248 1 82.02 ? P1 PIS 502 A 1 
HETATM 2 O O1 PIS . . . D 3 13.152 -16.238 -18.791 1 83.53 ? O1 PIS 502 A 1 
HETATM 3 P P2 PIS . . . D 3 12.049 -17.089 -17.953 1 85.62 ? P2 PIS 502 A 1 
HETATM 4 S S1 PIS . . . D 3 12.506 -18.659 -18.057 1 85.31 ? S1 PIS 502 A 1 
HETATM 5 O O2 PIS . . . D 3 12.46 -14.863 -20.831 1 80.1 ? O2 PIS 502 A 1 
HETATM 6 O O3 PIS . . . D 3 14.196 -13.99 -19.095 1 83.23 ? O3 PIS 502 A 1 
HETATM 7 O O4 PIS . . . D 3 10.678 -16.879 -18.51 1 87.87 ? O4 PIS 502 A 1 
HETATM 8 O O5 PIS . . . D 3 11.743 -14.093 -18.446 1 81.43 ? O5 PIS 502 A 1 
HETATM 9 O O6 PIS . . . D 3 12.177 -16.648 -16.39 1 83.19 ? O6 PIS 502 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           9 
#