data_4E0U # _model_server_result.job_id IyTn1AIOcST0P_uXLXt7NQ _model_server_result.datetime_utc '2024-11-05 03:52:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":504}' # _entry.id 4E0U # _exptl.entry_id 4E0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E0U _cell.length_a 137.73 _cell.length_b 137.73 _cell.length_c 170.51 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1,2 B,I,J,K,L,M,O 2 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 357 A LEU 369 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A O ILE 360 A ILE 372 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc3 A OE2 GLU 362 A GLU 374 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc4 A O THR 402 A THR 414 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc5 A O GLN 405 A GLN 417 1_555 G NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 223 n y N1 C5 IMD sing 224 n y N1 HN1 IMD sing 225 n n C2 N3 IMD doub 226 n y C2 H2 IMD sing 227 n n N3 C4 IMD sing 228 n y N3 HN3 IMD sing 229 n n C4 C5 IMD doub 230 n y C4 H4 IMD sing 231 n n C5 H5 IMD sing 232 n n # _atom_sites.entry_id 4E0U _atom_sites.fract_transf_matrix[1][1] 0.007261 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007261 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0MV A 1 501 501 0MV 0MV . D 3 PIS A 1 502 502 PIS PIS . E 4 IMD A 1 503 503 IMD IMD . F 5 EDO A 1 504 504 EDO EDO . G 6 NA A 1 505 505 NA NA . H 5 EDO A 1 506 506 EDO EDO . I 2 0MV B 1 501 501 0MV 0MV . J 3 PIS B 1 502 502 PIS PIS . K 5 EDO B 1 503 503 EDO EDO . L 4 IMD B 1 504 504 IMD IMD . M 5 EDO B 1 505 505 EDO EDO . N 7 HOH A 1 601 601 HOH HOH . N 7 HOH A 2 602 602 HOH HOH . N 7 HOH A 3 603 603 HOH HOH . N 7 HOH A 4 604 604 HOH HOH . N 7 HOH A 5 605 605 HOH HOH . N 7 HOH A 6 606 606 HOH HOH . N 7 HOH A 7 607 607 HOH HOH . N 7 HOH A 8 608 608 HOH HOH . N 7 HOH A 9 609 609 HOH HOH . N 7 HOH A 10 610 610 HOH HOH . N 7 HOH A 11 611 611 HOH HOH . N 7 HOH A 12 612 612 HOH HOH . N 7 HOH A 13 613 613 HOH HOH . N 7 HOH A 14 614 614 HOH HOH . N 7 HOH A 15 615 615 HOH HOH . N 7 HOH A 16 616 616 HOH HOH . N 7 HOH A 17 617 617 HOH HOH . N 7 HOH A 18 618 618 HOH HOH . N 7 HOH A 19 619 619 HOH HOH . N 7 HOH A 20 620 620 HOH HOH . N 7 HOH A 21 621 621 HOH HOH . N 7 HOH A 22 622 622 HOH HOH . O 7 HOH B 1 601 601 HOH HOH . O 7 HOH B 2 602 602 HOH HOH . O 7 HOH B 3 603 603 HOH HOH . O 7 HOH B 4 604 604 HOH HOH . O 7 HOH B 5 605 605 HOH HOH . O 7 HOH B 6 606 606 HOH HOH . O 7 HOH B 7 607 607 HOH HOH . O 7 HOH B 8 608 608 HOH HOH . O 7 HOH B 9 609 609 HOH HOH . O 7 HOH B 10 610 610 HOH HOH . O 7 HOH B 11 611 611 HOH HOH . O 7 HOH B 12 612 612 HOH HOH . O 7 HOH B 13 613 613 HOH HOH . O 7 HOH B 14 614 614 HOH HOH . O 7 HOH B 15 615 615 HOH HOH . O 7 HOH B 16 616 616 HOH HOH . O 7 HOH B 17 617 617 HOH HOH . O 7 HOH B 18 618 618 HOH HOH . O 7 HOH B 19 619 619 HOH HOH . O 7 HOH B 20 620 620 HOH HOH . O 7 HOH B 21 621 621 HOH HOH . O 7 HOH B 22 622 622 HOH HOH . O 7 HOH B 23 623 623 HOH HOH . O 7 HOH B 24 624 624 HOH HOH . O 7 HOH B 25 625 625 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . L 4 -34.288 -20.808 -29.979 1 81.58 ? N1 IMD 504 B 1 HETATM 2 C C2 IMD . . . L 4 -33.644 -21.419 -28.955 1 81.44 ? C2 IMD 504 B 1 HETATM 3 N N3 IMD . . . L 4 -34.474 -21.45 -27.888 1 81.72 ? N3 IMD 504 B 1 HETATM 4 C C4 IMD . . . L 4 -35.635 -20.849 -28.234 1 80.5 ? C4 IMD 504 B 1 HETATM 5 C C5 IMD . . . L 4 -35.518 -20.439 -29.554 1 80.67 ? C5 IMD 504 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #