data_4E0V # _model_server_result.job_id keg3cNknudtpDZlSsofvdg _model_server_result.datetime_utc '2025-03-27 00:21:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 4E0V # _exptl.entry_id 4E0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.9 _cell.angle_gamma 90 _cell.entry_id 4E0V _cell.length_a 66.385 _cell.length_b 72.19 _cell.length_c 101.527 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 10 1_555 A SG CYS 186 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 344 A CYS 331 1_555 A SG CYS 425 A CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 B SG CYS 23 B CYS 10 1_555 B SG CYS 186 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 B SG CYS 344 B CYS 331 1_555 B SG CYS 425 B CYS 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 4E0V _atom_sites.fract_transf_matrix[1][1] 0.015064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000238 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009851 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 1 FAD FAD . D 2 FAD B 1 501 1 FAD FAD . E 3 HOH A 1 601 1 HOH HOH . E 3 HOH A 2 602 2 HOH HOH . E 3 HOH A 3 603 4 HOH HOH . E 3 HOH A 4 604 12 HOH HOH . E 3 HOH A 5 605 13 HOH HOH . E 3 HOH A 6 606 14 HOH HOH . E 3 HOH A 7 607 15 HOH HOH . F 3 HOH B 1 601 3 HOH HOH . F 3 HOH B 2 602 5 HOH HOH . F 3 HOH B 3 603 7 HOH HOH . F 3 HOH B 4 604 8 HOH HOH . F 3 HOH B 5 605 9 HOH HOH . F 3 HOH B 6 606 10 HOH HOH . F 3 HOH B 7 607 11 HOH HOH . F 3 HOH B 8 608 16 HOH HOH . F 3 HOH B 9 609 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 2.898 0.897 9.623 1 22.84 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . C 2 3.682 1.371 10.839 1 23.26 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . C 2 3.729 0.919 8.352 1 21.18 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . C 2 1.589 1.792 9.422 1 25.17 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . C 2 0.482 1.126 8.841 1 28.49 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . C 2 0.105 1.897 7.586 1 29.24 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . C 2 0.886 1.644 6.441 1 30.02 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . C 2 -1.295 1.751 7.044 1 29.6 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . C 2 -2.252 2.311 7.893 1 30.43 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . C 2 -1.125 2.647 5.855 1 30.7 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . C 2 -1.623 3.916 6.201 1 29.36 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . C 2 0.386 2.696 5.651 1 32.66 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . C 2 0.584 2.563 4.216 1 36.58 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . C 2 1.717 2.702 3.443 1 38.07 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . C 2 1.325 2.492 2.154 1 40.29 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . C 2 -0.029 2.238 2.121 1 39.44 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . C 2 -0.957 1.994 1.109 1 39.58 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . C 2 -0.868 2.796 0.051 1 40.82 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . C 2 -2.269 1.753 1.45 1 39.15 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . C 2 -2.689 1.805 2.747 1 38.4 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . C 2 -1.774 2.076 3.724 1 37.91 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . C 2 -0.486 2.295 3.416 1 37.95 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . C 2 11.693 -3.424 12.351 1 15.22 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . C 2 12.666 -4.395 12.312 1 16.43 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . C 2 12.304 -5.58 12.243 1 18.97 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . C 2 14.01 -4.043 12.362 1 14.18 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . C 2 14.363 -2.72 12.451 1 12.25 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . C 2 15.544 -2.422 12.491 1 9.62 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . C 2 13.379 -1.737 12.499 1 13.24 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . C 2 13.723 -0.405 12.593 1 12.91 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . C 2 12.715 0.533 12.622 1 12.29 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . C 2 13.042 1.853 12.71 1 9.83 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . C 2 12.04 2.79 12.726 1 9.97 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . C 2 12.502 4.214 12.815 1 10.51 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . C 2 10.679 2.433 12.659 1 10.77 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . C 2 9.535 3.434 12.679 1 8.82 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . C 2 10.357 1.1 12.573 1 11.67 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . C 2 11.377 0.163 12.55 1 13.57 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . C 2 11.027 -1.162 12.468 1 14.87 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . C 2 12.036 -2.101 12.447 1 14.09 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . C 2 9.616 -1.545 12.874 1 17.13 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . C 2 8.638 -2.026 11.766 1 18.38 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . C 2 8.963 -1.617 10.441 1 18.41 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . C 2 7.234 -1.532 12.105 1 18.97 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . C 2 6.916 -1.932 13.419 1 19.73 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . C 2 6.169 -1.982 11.106 1 19.47 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . C 2 5.934 -0.939 10.181 1 20.29 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . C 2 4.818 -2.261 11.748 1 19.84 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . C 2 3.862 -2.076 10.722 1 20.44 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . C 2 2.33 -1.638 10.977 1 19.09 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . C 2 1.462 -2.806 10.596 1 21.23 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . C 2 2.109 -1.296 12.431 1 18.25 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . C 2 2.067 -0.487 9.872 1 20.42 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #