data_4E0W # _model_server_result.job_id pY1nKwLHxjjkbMvrZGhh1A _model_server_result.datetime_utc '2024-11-28 17:22:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4E0W # _exptl.entry_id 4E0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 213.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E0W _cell.length_a 68.558 _cell.length_b 68.558 _cell.length_c 126.883 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 203 A CYS 203 1_555 A SG CYS 257 A CYS 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A O ASN 5 A ASN 5 1_555 F K K . A K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc2 A O SER 24 A SER 24 1_555 E K K . A K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc3 A O ARG 26 A ARG 26 1_555 E K K . A K 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc4 A OG SER 52 A SER 52 1_555 F K K . A K 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc5 E K K . A K 304 1_555 G O HOH . A HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.027 ? metalc ? metalc6 E K K . A K 304 1_555 G O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc7 E K K . A K 304 1_555 G O HOH . A HOH 465 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc8 F K K . A K 305 1_555 G O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? # _chem_comp.formula 'C10 H15 N O4' _chem_comp.formula_weight 213.23 _chem_comp.id KAI _chem_comp.mon_nstd_flag . _chem_comp.name 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms KAINATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CD KAI sing 173 n n N CA KAI sing 174 n n N HN1 KAI sing 175 n n CD CG KAI sing 176 n n CD HD1 KAI sing 177 n n CD HD2 KAI sing 178 n n CD1 CG2 KAI doub 179 n n CD1 HD11 KAI sing 180 n n CD1 HD12 KAI sing 181 n n CD2 CG2 KAI sing 182 n n CD2 HD21 KAI sing 183 n n CD2 HD22 KAI sing 184 n n CD2 HD23 KAI sing 185 n n CA CB KAI sing 186 n n CA C KAI sing 187 n n CA HA KAI sing 188 n n CB CB1 KAI sing 189 n n CB CG KAI sing 190 n n CB HB KAI sing 191 n n CB1 CG1 KAI sing 192 n n CB1 HB11 KAI sing 193 n n CB1 HB12 KAI sing 194 n n CG CG2 KAI sing 195 n n CG HG KAI sing 196 n n CG1 OD1 KAI sing 197 n n CG1 OD2 KAI doub 198 n n C O KAI doub 199 n n C OXT KAI sing 200 n n OD1 HOD1 KAI sing 201 n n OXT HXT KAI sing 202 n n # _atom_sites.entry_id 4E0W _atom_sites.fract_transf_matrix[1][1] 0.014586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014586 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007881 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KAI A 1 301 2 KAI KAI . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 2 CL CL . E 4 K A 1 304 1 K K . F 4 K A 1 305 2 K K . G 5 HOH A 1 401 2 HOH HOH . G 5 HOH A 2 402 3 HOH HOH . G 5 HOH A 3 403 4 HOH HOH . G 5 HOH A 4 404 6 HOH HOH . G 5 HOH A 5 405 7 HOH HOH . G 5 HOH A 6 406 8 HOH HOH . G 5 HOH A 7 407 9 HOH HOH . G 5 HOH A 8 408 10 HOH HOH . G 5 HOH A 9 409 11 HOH HOH . G 5 HOH A 10 410 12 HOH HOH . G 5 HOH A 11 411 13 HOH HOH . G 5 HOH A 12 412 14 HOH HOH . G 5 HOH A 13 413 15 HOH HOH . G 5 HOH A 14 414 16 HOH HOH . G 5 HOH A 15 415 17 HOH HOH . G 5 HOH A 16 416 18 HOH HOH . G 5 HOH A 17 417 19 HOH HOH . G 5 HOH A 18 418 20 HOH HOH . G 5 HOH A 19 419 21 HOH HOH . G 5 HOH A 20 420 22 HOH HOH . G 5 HOH A 21 421 23 HOH HOH . G 5 HOH A 22 422 24 HOH HOH . G 5 HOH A 23 423 25 HOH HOH . G 5 HOH A 24 424 27 HOH HOH . G 5 HOH A 25 425 28 HOH HOH . G 5 HOH A 26 426 29 HOH HOH . G 5 HOH A 27 427 30 HOH HOH . G 5 HOH A 28 428 31 HOH HOH . G 5 HOH A 29 429 32 HOH HOH . G 5 HOH A 30 430 33 HOH HOH . G 5 HOH A 31 431 34 HOH HOH . G 5 HOH A 32 432 36 HOH HOH . G 5 HOH A 33 433 37 HOH HOH . G 5 HOH A 34 434 38 HOH HOH . G 5 HOH A 35 435 39 HOH HOH . G 5 HOH A 36 436 40 HOH HOH . G 5 HOH A 37 437 41 HOH HOH . G 5 HOH A 38 438 42 HOH HOH . G 5 HOH A 39 439 43 HOH HOH . G 5 HOH A 40 440 44 HOH HOH . G 5 HOH A 41 441 45 HOH HOH . G 5 HOH A 42 442 46 HOH HOH . G 5 HOH A 43 443 47 HOH HOH . G 5 HOH A 44 444 48 HOH HOH . G 5 HOH A 45 445 49 HOH HOH . G 5 HOH A 46 446 50 HOH HOH . G 5 HOH A 47 447 51 HOH HOH . G 5 HOH A 48 448 52 HOH HOH . G 5 HOH A 49 449 54 HOH HOH . G 5 HOH A 50 450 55 HOH HOH . G 5 HOH A 51 451 56 HOH HOH . G 5 HOH A 52 452 57 HOH HOH . G 5 HOH A 53 453 58 HOH HOH . G 5 HOH A 54 454 59 HOH HOH . G 5 HOH A 55 455 60 HOH HOH . G 5 HOH A 56 456 61 HOH HOH . G 5 HOH A 57 457 62 HOH HOH . G 5 HOH A 58 458 63 HOH HOH . G 5 HOH A 59 459 64 HOH HOH . G 5 HOH A 60 460 65 HOH HOH . G 5 HOH A 61 461 66 HOH HOH . G 5 HOH A 62 462 67 HOH HOH . G 5 HOH A 63 463 68 HOH HOH . G 5 HOH A 64 464 69 HOH HOH . G 5 HOH A 65 465 70 HOH HOH . G 5 HOH A 66 466 71 HOH HOH . G 5 HOH A 67 467 72 HOH HOH . G 5 HOH A 68 468 73 HOH HOH . G 5 HOH A 69 469 75 HOH HOH . G 5 HOH A 70 470 76 HOH HOH . G 5 HOH A 71 471 77 HOH HOH . G 5 HOH A 72 472 78 HOH HOH . G 5 HOH A 73 473 79 HOH HOH . G 5 HOH A 74 474 80 HOH HOH . G 5 HOH A 75 475 81 HOH HOH . G 5 HOH A 76 476 82 HOH HOH . G 5 HOH A 77 477 83 HOH HOH . G 5 HOH A 78 478 84 HOH HOH . G 5 HOH A 79 479 85 HOH HOH . G 5 HOH A 80 480 86 HOH HOH . G 5 HOH A 81 481 87 HOH HOH . G 5 HOH A 82 482 88 HOH HOH . G 5 HOH A 83 483 89 HOH HOH . G 5 HOH A 84 484 90 HOH HOH . G 5 HOH A 85 485 91 HOH HOH . G 5 HOH A 86 486 92 HOH HOH . G 5 HOH A 87 487 93 HOH HOH . G 5 HOH A 88 488 94 HOH HOH . G 5 HOH A 89 489 95 HOH HOH . G 5 HOH A 90 490 96 HOH HOH . G 5 HOH A 91 491 97 HOH HOH . G 5 HOH A 92 492 98 HOH HOH . G 5 HOH A 93 493 99 HOH HOH . G 5 HOH A 94 494 100 HOH HOH . G 5 HOH A 95 495 101 HOH HOH . G 5 HOH A 96 496 102 HOH HOH . G 5 HOH A 97 497 103 HOH HOH . G 5 HOH A 98 498 104 HOH HOH . G 5 HOH A 99 499 105 HOH HOH . G 5 HOH A 100 500 107 HOH HOH . G 5 HOH A 101 501 108 HOH HOH . G 5 HOH A 102 502 109 HOH HOH . G 5 HOH A 103 503 110 HOH HOH . G 5 HOH A 104 504 112 HOH HOH . G 5 HOH A 105 505 113 HOH HOH . G 5 HOH A 106 506 114 HOH HOH . G 5 HOH A 107 507 115 HOH HOH . G 5 HOH A 108 508 116 HOH HOH . G 5 HOH A 109 509 117 HOH HOH . G 5 HOH A 110 510 118 HOH HOH . G 5 HOH A 111 511 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N KAI . . . B 2 -4.382 30.299 -14.072 1 36.84 ? N KAI 301 A 1 HETATM 2 C CD KAI . . . B 2 -4.838 30.528 -15.477 1 37.82 ? CD KAI 301 A 1 HETATM 3 C CD1 KAI . . . B 2 -2.819 29.215 -18.651 1 31.05 ? CD1 KAI 301 A 1 HETATM 4 C CD2 KAI . . . B 2 -5.258 29.444 -18.275 1 32.93 ? CD2 KAI 301 A 1 HETATM 5 C CA KAI . . . B 2 -2.954 29.737 -14.127 1 36.5 ? CA KAI 301 A 1 HETATM 6 C CB KAI . . . B 2 -2.918 29.057 -15.505 1 29.15 ? CB KAI 301 A 1 HETATM 7 C CB1 KAI . . . B 2 -3.615 27.682 -15.473 1 27.67 ? CB1 KAI 301 A 1 HETATM 8 C CG KAI . . . B 2 -3.676 30.087 -16.386 1 40.47 ? CG KAI 301 A 1 HETATM 9 C CG1 KAI . . . B 2 -2.82 26.531 -14.868 1 40.66 ? CG1 KAI 301 A 1 HETATM 10 C CG2 KAI . . . B 2 -4.009 29.585 -17.79 1 37.59 ? CG2 KAI 301 A 1 HETATM 11 C C KAI . . . B 2 -1.859 30.851 -13.962 1 30.59 ? C KAI 301 A 1 HETATM 12 O O KAI . . . B 2 -2.312 31.93 -13.468 1 38.71 ? O KAI 301 A 1 HETATM 13 O OD1 KAI . . . B 2 -3.535 25.587 -14.405 1 42.36 ? OD1 KAI 301 A 1 HETATM 14 O OD2 KAI . . . B 2 -1.555 26.612 -14.865 1 37.26 ? OD2 KAI 301 A 1 HETATM 15 O OXT KAI . . . B 2 -0.678 30.608 -14.32 1 37.51 ? OXT KAI 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #