data_4E28 # _model_server_result.job_id 4pj8e8WYi3GjO5zU2BIodQ _model_server_result.datetime_utc '2024-12-27 01:18:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4E28 # _exptl.entry_id 4E28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 436.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{(2Z,5S)-4-hydroxy-2-[(2E)-(2-hydroxybenzylidene)hydrazinylidene]-2,5-dihydro-1,3-thiazol-5-yl}-N-[3-(trifluoromethyl)phenyl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4E28 _cell.length_a 95.747 _cell.length_b 95.747 _cell.length_c 82.407 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 54.938 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 191 A MET 179 1_555 A N CME 192 A CME 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CME 192 A CME 180 1_555 A N ALA 193 A ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C PRO 206 A PRO 194 1_555 A N CME 207 A CME 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C CME 207 A CME 195 1_555 A N HIS 208 A HIS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C19 H15 F3 N4 O3 S' _chem_comp.formula_weight 436.408 _chem_comp.id 0MZ _chem_comp.mon_nstd_flag . _chem_comp.name 2-{(2Z,5S)-4-hydroxy-2-[(2E)-(2-hydroxybenzylidene)hydrazinylidene]-2,5-dihydro-1,3-thiazol-5-yl}-N-[3-(trifluoromethyl)phenyl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C24 0MZ doub 1 n y C23 C22 0MZ sing 2 n y C24 C25 0MZ sing 3 n y F29 C27 0MZ sing 4 n n C22 C21 0MZ doub 5 n y F30 C27 0MZ sing 6 n n C25 C27 0MZ sing 7 n n C25 C26 0MZ doub 8 n y C27 F28 0MZ sing 9 n n C21 C26 0MZ sing 10 n y C21 N18 0MZ sing 11 n n C4 C3 0MZ doub 12 n y C4 C5 0MZ sing 13 n y N18 C17 0MZ sing 14 n n C3 C2 0MZ sing 15 n y C5 C6 0MZ doub 16 n y O19 C17 0MZ doub 17 n n C17 C16 0MZ sing 18 n n C2 C1 0MZ doub 19 n y S12 C13 0MZ sing 20 n n S12 C11 0MZ sing 21 n n C13 C16 0MZ sing 22 n n C13 C14 0MZ sing 23 n n C6 C1 0MZ sing 24 n y C6 C8 0MZ sing 25 n n C1 O1 0MZ sing 26 n n N9 C8 0MZ doub 27 e n N9 N10 0MZ sing 28 n n C11 N10 0MZ doub 29 z n C11 N15 0MZ sing 30 n n C14 O20 0MZ sing 31 n n C14 N15 0MZ doub 32 n n C26 H26 0MZ sing 33 n n C24 H24 0MZ sing 34 n n C23 H23 0MZ sing 35 n n C22 H22 0MZ sing 36 n n N18 H1 0MZ sing 37 n n C16 H161 0MZ sing 38 n n C16 H162 0MZ sing 39 n n C13 H13 0MZ sing 40 n n O20 HO20 0MZ sing 41 n n C8 H8 0MZ sing 42 n n C5 H5 0MZ sing 43 n n C4 H4 0MZ sing 44 n n C3 H3 0MZ sing 45 n n C2 H2 0MZ sing 46 n n O1 HO1 0MZ sing 47 n n # _atom_sites.entry_id 4E28 _atom_sites.fract_transf_matrix[1][1] 0.010444 _atom_sites.fract_transf_matrix[1][2] 0.00603 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 316 SO4 SO4 . C 2 SO4 A 1 402 317 SO4 SO4 . D 3 0MZ A 1 403 1 0MZ 0MZ . E 4 9MZ A 1 404 2 9MZ 9MZ . F 5 HOH A 1 501 2 HOH HOH . F 5 HOH A 2 502 3 HOH HOH . F 5 HOH A 3 503 4 HOH HOH . F 5 HOH A 4 504 5 HOH HOH . F 5 HOH A 5 505 6 HOH HOH . F 5 HOH A 6 506 7 HOH HOH . F 5 HOH A 7 507 8 HOH HOH . F 5 HOH A 8 508 9 HOH HOH . F 5 HOH A 9 509 10 HOH HOH . F 5 HOH A 10 510 11 HOH HOH . F 5 HOH A 11 511 12 HOH HOH . F 5 HOH A 12 512 13 HOH HOH . F 5 HOH A 13 513 14 HOH HOH . F 5 HOH A 14 514 15 HOH HOH . F 5 HOH A 15 515 17 HOH HOH . F 5 HOH A 16 516 18 HOH HOH . F 5 HOH A 17 517 19 HOH HOH . F 5 HOH A 18 518 20 HOH HOH . F 5 HOH A 19 519 21 HOH HOH . F 5 HOH A 20 520 24 HOH HOH . F 5 HOH A 21 521 25 HOH HOH . F 5 HOH A 22 522 29 HOH HOH . F 5 HOH A 23 523 30 HOH HOH . F 5 HOH A 24 524 32 HOH HOH . F 5 HOH A 25 525 34 HOH HOH . F 5 HOH A 26 526 35 HOH HOH . F 5 HOH A 27 527 36 HOH HOH . F 5 HOH A 28 528 37 HOH HOH . F 5 HOH A 29 529 38 HOH HOH . F 5 HOH A 30 530 39 HOH HOH . F 5 HOH A 31 531 40 HOH HOH . F 5 HOH A 32 532 41 HOH HOH . F 5 HOH A 33 533 43 HOH HOH . F 5 HOH A 34 534 44 HOH HOH . F 5 HOH A 35 535 48 HOH HOH . F 5 HOH A 36 536 51 HOH HOH . F 5 HOH A 37 537 52 HOH HOH . F 5 HOH A 38 538 53 HOH HOH . F 5 HOH A 39 539 55 HOH HOH . F 5 HOH A 40 540 57 HOH HOH . F 5 HOH A 41 541 60 HOH HOH . F 5 HOH A 42 542 65 HOH HOH . F 5 HOH A 43 543 66 HOH HOH . F 5 HOH A 44 544 69 HOH HOH . F 5 HOH A 45 545 70 HOH HOH . F 5 HOH A 46 546 71 HOH HOH . F 5 HOH A 47 547 72 HOH HOH . F 5 HOH A 48 548 74 HOH HOH . F 5 HOH A 49 549 77 HOH HOH . F 5 HOH A 50 550 78 HOH HOH . F 5 HOH A 51 551 82 HOH HOH . F 5 HOH A 52 552 83 HOH HOH . F 5 HOH A 53 553 87 HOH HOH . F 5 HOH A 54 554 88 HOH HOH . F 5 HOH A 55 555 92 HOH HOH . F 5 HOH A 56 556 93 HOH HOH . F 5 HOH A 57 557 94 HOH HOH . F 5 HOH A 58 558 2 HOH HOH . F 5 HOH A 59 559 3 HOH HOH . F 5 HOH A 60 560 4 HOH HOH . F 5 HOH A 61 561 5 HOH HOH . F 5 HOH A 62 562 6 HOH HOH . F 5 HOH A 63 563 7 HOH HOH . F 5 HOH A 64 564 8 HOH HOH . F 5 HOH A 65 565 9 HOH HOH . F 5 HOH A 66 566 10 HOH HOH . F 5 HOH A 67 567 11 HOH HOH . F 5 HOH A 68 568 12 HOH HOH . F 5 HOH A 69 569 13 HOH HOH . F 5 HOH A 70 570 2 HOH HOH . F 5 HOH A 71 571 3 HOH HOH . F 5 HOH A 72 572 4 HOH HOH . F 5 HOH A 73 573 5 HOH HOH . F 5 HOH A 74 574 6 HOH HOH . F 5 HOH A 75 575 7 HOH HOH . F 5 HOH A 76 576 8 HOH HOH . F 5 HOH A 77 577 9 HOH HOH . F 5 HOH A 78 578 10 HOH HOH . F 5 HOH A 79 579 11 HOH HOH . F 5 HOH A 80 580 13 HOH HOH . F 5 HOH A 81 581 21 HOH HOH . F 5 HOH A 82 582 26 HOH HOH . F 5 HOH A 83 583 31 HOH HOH . F 5 HOH A 84 584 33 HOH HOH . F 5 HOH A 85 585 34 HOH HOH . F 5 HOH A 86 586 37 HOH HOH . F 5 HOH A 87 587 40 HOH HOH . F 5 HOH A 88 588 42 HOH HOH . F 5 HOH A 89 589 45 HOH HOH . F 5 HOH A 90 590 46 HOH HOH . F 5 HOH A 91 591 50 HOH HOH . F 5 HOH A 92 592 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F28 0MZ . B . D 3 41.945 -24.044 12.263 0.32 142.69 ? F28 0MZ 403 A 1 HETATM 2 C C27 0MZ . B . D 3 42.053 -23.734 10.984 0.32 142.68 ? C27 0MZ 403 A 1 HETATM 3 F F30 0MZ . B . D 3 40.984 -23.055 10.61 0.32 143.24 ? F30 0MZ 403 A 1 HETATM 4 F F29 0MZ . B . D 3 42.15 -24.836 10.265 0.32 143.15 ? F29 0MZ 403 A 1 HETATM 5 C C25 0MZ . B . D 3 43.271 -22.886 10.773 0.32 141.07 ? C25 0MZ 403 A 1 HETATM 6 C C26 0MZ . B . D 3 43.872 -22.257 11.856 0.32 139.56 ? C26 0MZ 403 A 1 HETATM 7 C C24 0MZ . B . D 3 43.794 -22.721 9.495 0.32 140.52 ? C24 0MZ 403 A 1 HETATM 8 C C23 0MZ . B . D 3 44.923 -21.932 9.302 0.32 138.43 ? C23 0MZ 403 A 1 HETATM 9 C C22 0MZ . B . D 3 45.523 -21.302 10.384 0.32 137.19 ? C22 0MZ 403 A 1 HETATM 10 C C21 0MZ . B . D 3 45.002 -21.475 11.66 0.32 137.88 ? C21 0MZ 403 A 1 HETATM 11 N N18 0MZ . B . D 3 45.599 -20.841 12.751 0.32 136.54 ? N18 0MZ 403 A 1 HETATM 12 C C17 0MZ . B . D 3 46.409 -21.515 13.561 0.32 135.45 ? C17 0MZ 403 A 1 HETATM 13 O O19 0MZ . B . D 3 46.687 -22.694 13.409 0.32 136.69 ? O19 0MZ 403 A 1 HETATM 14 C C16 0MZ . B . D 3 46.986 -20.729 14.71 0.32 130.94 ? C16 0MZ 403 A 1 HETATM 15 C C13 0MZ . B . D 3 47.316 -19.31 14.264 0.32 130.37 ? C13 0MZ 403 A 1 HETATM 16 C C14 0MZ . B . D 3 47.013 -18.349 15.379 0.32 128.08 ? C14 0MZ 403 A 1 HETATM 17 O O20 0MZ . B . D 3 45.781 -18.04 15.746 0.32 127.59 ? O20 0MZ 403 A 1 HETATM 18 N N15 0MZ . B . D 3 48.02 -17.84 15.959 0.32 125.17 ? N15 0MZ 403 A 1 HETATM 19 C C11 0MZ . B . D 3 49.181 -18.083 15.364 0.32 123.14 ? C11 0MZ 403 A 1 HETATM 20 S S12 0MZ . B . D 3 49.046 -19.088 14.053 0.32 111.43 ? S12 0MZ 403 A 1 HETATM 21 N N10 0MZ . B . D 3 50.273 -17.612 15.756 0.32 116.99 ? N10 0MZ 403 A 1 HETATM 22 N N9 0MZ . B . D 3 51.394 -17.973 14.996 0.32 112.65 ? N9 0MZ 403 A 1 HETATM 23 C C8 0MZ . B . D 3 52.564 -17.856 15.429 0.32 108.52 ? C8 0MZ 403 A 1 HETATM 24 C C6 0MZ . B . D 3 53.667 -18.262 14.534 0.32 99.85 ? C6 0MZ 403 A 1 HETATM 25 C C5 0MZ . B . D 3 53.317 -18.734 13.279 0.32 98.23 ? C5 0MZ 403 A 1 HETATM 26 C C4 0MZ . B . D 3 54.297 -19.134 12.387 0.32 100.7 ? C4 0MZ 403 A 1 HETATM 27 C C3 0MZ . B . D 3 55.628 -19.06 12.751 0.32 101.58 ? C3 0MZ 403 A 1 HETATM 28 C C2 0MZ . B . D 3 55.978 -18.588 14.003 0.32 100.24 ? C2 0MZ 403 A 1 HETATM 29 C C1 0MZ . B . D 3 55.001 -18.184 14.902 0.32 97.12 ? C1 0MZ 403 A 1 HETATM 30 O O1 0MZ . B . D 3 55.391 -17.725 16.128 0.32 85.64 ? O1 0MZ 403 A 1 HETATM 31 H H26 0MZ . B . D 3 43.465 -22.384 12.851 0.32 167.39 ? H26 0MZ 403 A 1 HETATM 32 H H24 0MZ . B . D 3 43.324 -23.21 8.651 0.32 168.54 ? H24 0MZ 403 A 1 HETATM 33 H H23 0MZ . B . D 3 45.33 -21.805 8.306 0.32 166.03 ? H23 0MZ 403 A 1 HETATM 34 H H22 0MZ . B . D 3 46.404 -20.69 10.236 0.32 164.54 ? H22 0MZ 403 A 1 HETATM 35 H H161 0MZ . B . D 3 47.892 -21.22 15.072 0.32 157.05 ? H161 0MZ 403 A 1 HETATM 36 H H162 0MZ . B . D 3 46.267 -20.698 15.531 0.32 157.05 ? H162 0MZ 403 A 1 HETATM 37 H H13 0MZ . B . D 3 46.757 -19.047 13.354 0.32 156.35 ? H13 0MZ 403 A 1 HETATM 38 H HO20 0MZ . B . D 3 45.81 -17.471 16.527 0.32 153.02 ? HO20 0MZ 403 A 1 HETATM 39 H H8 0MZ . B . D 3 52.758 -17.479 16.42 0.32 130.14 ? H8 0MZ 403 A 1 HETATM 40 H H5 0MZ . B . D 3 52.274 -18.794 12.997 0.32 117.8 ? H5 0MZ 403 A 1 HETATM 41 H H4 0MZ . B . D 3 54.021 -19.504 11.408 0.32 120.76 ? H4 0MZ 403 A 1 HETATM 42 H H3 0MZ . B . D 3 56.397 -19.371 12.054 0.32 121.81 ? H3 0MZ 403 A 1 HETATM 43 H H2 0MZ . B . D 3 57.023 -18.53 14.283 0.32 120.2 ? H2 0MZ 403 A 1 HETATM 44 H HO1 0MZ . B . D 3 54.618 -17.408 16.615 0.32 102.68 ? HO1 0MZ 403 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #