data_4E28 # _model_server_result.job_id Fqu9GEp5wje72gaI7Jdjtw _model_server_result.datetime_utc '2024-12-27 00:43:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 4E28 # _exptl.entry_id 4E28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 436.408 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{(5S)-2-[(2E)-2-(2-hydroxybenzylidene)hydrazinyl]-4-oxo-4,5-dihydro-1,3-thiazol-5-yl}-N-[3-(trifluoromethyl)phenyl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4E28 _cell.length_a 95.747 _cell.length_b 95.747 _cell.length_c 82.407 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 54.938 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 191 A MET 179 1_555 A N CME 192 A CME 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CME 192 A CME 180 1_555 A N ALA 193 A ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C PRO 206 A PRO 194 1_555 A N CME 207 A CME 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C CME 207 A CME 195 1_555 A N HIS 208 A HIS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C19 H15 F3 N4 O3 S' _chem_comp.formula_weight 436.408 _chem_comp.id 9MZ _chem_comp.mon_nstd_flag . _chem_comp.name 2-{(5S)-2-[(2E)-2-(2-hydroxybenzylidene)hydrazinyl]-4-oxo-4,5-dihydro-1,3-thiazol-5-yl}-N-[3-(trifluoromethyl)phenyl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F30 C27 9MZ sing 48 n n F28 C27 9MZ sing 49 n n C27 F29 9MZ sing 50 n n C27 C25 9MZ sing 51 n n O19 C17 9MZ doub 52 n n C25 C26 9MZ doub 53 n y C25 C24 9MZ sing 54 n y C26 C21 9MZ sing 55 n y C24 C23 9MZ doub 56 n y C17 N18 9MZ sing 57 n n C17 C16 9MZ sing 58 n n C4 C3 9MZ doub 59 n y C4 C5 9MZ sing 60 n y C21 N18 9MZ sing 61 n n C21 C22 9MZ doub 62 n y C23 C22 9MZ sing 63 n y C3 C2 9MZ sing 64 n y C16 C13 9MZ sing 65 n n C5 C6 9MZ doub 66 n y C2 C1 9MZ doub 67 n y C13 S12 9MZ sing 68 n n C13 C14 9MZ sing 69 n n C6 C1 9MZ sing 70 n y C6 C8 9MZ sing 71 n n C1 O1 9MZ sing 72 n n S12 C11 9MZ sing 73 n n O20 C14 9MZ doub 74 n n C14 N15 9MZ sing 75 n n N9 C8 9MZ doub 76 e n N9 N10 9MZ sing 77 n n C11 N15 9MZ doub 78 n n C11 N10 9MZ sing 79 n n C2 H2 9MZ sing 80 n n C4 H4 9MZ sing 81 n n C5 H5 9MZ sing 82 n n C26 H26 9MZ sing 83 n n C24 H24 9MZ sing 84 n n C23 H23 9MZ sing 85 n n C22 H22 9MZ sing 86 n n N18 H1 9MZ sing 87 n n C16 H161 9MZ sing 88 n n C16 H162 9MZ sing 89 n n C13 H13 9MZ sing 90 n n N10 H9 9MZ sing 91 n n C8 H8 9MZ sing 92 n n C3 H3 9MZ sing 93 n n O1 HO1 9MZ sing 94 n n # _atom_sites.entry_id 4E28 _atom_sites.fract_transf_matrix[1][1] 0.010444 _atom_sites.fract_transf_matrix[1][2] 0.00603 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 316 SO4 SO4 . C 2 SO4 A 1 402 317 SO4 SO4 . D 3 0MZ A 1 403 1 0MZ 0MZ . E 4 9MZ A 1 404 2 9MZ 9MZ . F 5 HOH A 1 501 2 HOH HOH . F 5 HOH A 2 502 3 HOH HOH . F 5 HOH A 3 503 4 HOH HOH . F 5 HOH A 4 504 5 HOH HOH . F 5 HOH A 5 505 6 HOH HOH . F 5 HOH A 6 506 7 HOH HOH . F 5 HOH A 7 507 8 HOH HOH . F 5 HOH A 8 508 9 HOH HOH . F 5 HOH A 9 509 10 HOH HOH . F 5 HOH A 10 510 11 HOH HOH . F 5 HOH A 11 511 12 HOH HOH . F 5 HOH A 12 512 13 HOH HOH . F 5 HOH A 13 513 14 HOH HOH . F 5 HOH A 14 514 15 HOH HOH . F 5 HOH A 15 515 17 HOH HOH . F 5 HOH A 16 516 18 HOH HOH . F 5 HOH A 17 517 19 HOH HOH . F 5 HOH A 18 518 20 HOH HOH . F 5 HOH A 19 519 21 HOH HOH . F 5 HOH A 20 520 24 HOH HOH . F 5 HOH A 21 521 25 HOH HOH . F 5 HOH A 22 522 29 HOH HOH . F 5 HOH A 23 523 30 HOH HOH . F 5 HOH A 24 524 32 HOH HOH . F 5 HOH A 25 525 34 HOH HOH . F 5 HOH A 26 526 35 HOH HOH . F 5 HOH A 27 527 36 HOH HOH . F 5 HOH A 28 528 37 HOH HOH . F 5 HOH A 29 529 38 HOH HOH . F 5 HOH A 30 530 39 HOH HOH . F 5 HOH A 31 531 40 HOH HOH . F 5 HOH A 32 532 41 HOH HOH . F 5 HOH A 33 533 43 HOH HOH . F 5 HOH A 34 534 44 HOH HOH . F 5 HOH A 35 535 48 HOH HOH . F 5 HOH A 36 536 51 HOH HOH . F 5 HOH A 37 537 52 HOH HOH . F 5 HOH A 38 538 53 HOH HOH . F 5 HOH A 39 539 55 HOH HOH . F 5 HOH A 40 540 57 HOH HOH . F 5 HOH A 41 541 60 HOH HOH . F 5 HOH A 42 542 65 HOH HOH . F 5 HOH A 43 543 66 HOH HOH . F 5 HOH A 44 544 69 HOH HOH . F 5 HOH A 45 545 70 HOH HOH . F 5 HOH A 46 546 71 HOH HOH . F 5 HOH A 47 547 72 HOH HOH . F 5 HOH A 48 548 74 HOH HOH . F 5 HOH A 49 549 77 HOH HOH . F 5 HOH A 50 550 78 HOH HOH . F 5 HOH A 51 551 82 HOH HOH . F 5 HOH A 52 552 83 HOH HOH . F 5 HOH A 53 553 87 HOH HOH . F 5 HOH A 54 554 88 HOH HOH . F 5 HOH A 55 555 92 HOH HOH . F 5 HOH A 56 556 93 HOH HOH . F 5 HOH A 57 557 94 HOH HOH . F 5 HOH A 58 558 2 HOH HOH . F 5 HOH A 59 559 3 HOH HOH . F 5 HOH A 60 560 4 HOH HOH . F 5 HOH A 61 561 5 HOH HOH . F 5 HOH A 62 562 6 HOH HOH . F 5 HOH A 63 563 7 HOH HOH . F 5 HOH A 64 564 8 HOH HOH . F 5 HOH A 65 565 9 HOH HOH . F 5 HOH A 66 566 10 HOH HOH . F 5 HOH A 67 567 11 HOH HOH . F 5 HOH A 68 568 12 HOH HOH . F 5 HOH A 69 569 13 HOH HOH . F 5 HOH A 70 570 2 HOH HOH . F 5 HOH A 71 571 3 HOH HOH . F 5 HOH A 72 572 4 HOH HOH . F 5 HOH A 73 573 5 HOH HOH . F 5 HOH A 74 574 6 HOH HOH . F 5 HOH A 75 575 7 HOH HOH . F 5 HOH A 76 576 8 HOH HOH . F 5 HOH A 77 577 9 HOH HOH . F 5 HOH A 78 578 10 HOH HOH . F 5 HOH A 79 579 11 HOH HOH . F 5 HOH A 80 580 13 HOH HOH . F 5 HOH A 81 581 21 HOH HOH . F 5 HOH A 82 582 26 HOH HOH . F 5 HOH A 83 583 31 HOH HOH . F 5 HOH A 84 584 33 HOH HOH . F 5 HOH A 85 585 34 HOH HOH . F 5 HOH A 86 586 37 HOH HOH . F 5 HOH A 87 587 40 HOH HOH . F 5 HOH A 88 588 42 HOH HOH . F 5 HOH A 89 589 45 HOH HOH . F 5 HOH A 90 590 46 HOH HOH . F 5 HOH A 91 591 50 HOH HOH . F 5 HOH A 92 592 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 9MZ . A . E 4 55.707 -17.401 14.14 0.68 99.09 ? C2 9MZ 404 A 1 HETATM 2 C C4 9MZ . A . E 4 54.174 -18.441 12.614 0.68 97.22 ? C4 9MZ 404 A 1 HETATM 3 C C5 9MZ . A . E 4 53.161 -18.327 13.55 0.68 97.25 ? C5 9MZ 404 A 1 HETATM 4 C C6 9MZ . A . E 4 53.427 -17.748 14.778 0.68 103.12 ? C6 9MZ 404 A 1 HETATM 5 F F28 9MZ . A . E 4 42.095 -21.023 10.537 0.68 141.13 ? F28 9MZ 404 A 1 HETATM 6 C C27 9MZ . A . E 4 42.11 -22.316 10.8 0.68 141.6 ? C27 9MZ 404 A 1 HETATM 7 F F30 9MZ . A . E 4 42.182 -22.992 9.666 0.68 142.76 ? F30 9MZ 404 A 1 HETATM 8 F F29 9MZ . A . E 4 41.002 -22.626 11.45 0.68 141.96 ? F29 9MZ 404 A 1 HETATM 9 C C25 9MZ . A . E 4 43.297 -22.638 11.66 0.68 140.48 ? C25 9MZ 404 A 1 HETATM 10 C C26 9MZ . A . E 4 44.192 -21.634 12.01 0.68 138.64 ? C26 9MZ 404 A 1 HETATM 11 C C24 9MZ . A . E 4 43.511 -23.944 12.089 0.68 140.89 ? C24 9MZ 404 A 1 HETATM 12 C C23 9MZ . A . E 4 44.612 -24.244 12.883 0.68 139.28 ? C23 9MZ 404 A 1 HETATM 13 C C22 9MZ . A . E 4 45.503 -23.24 13.236 0.68 137.99 ? C22 9MZ 404 A 1 HETATM 14 C C21 9MZ . A . E 4 45.299 -21.935 12.797 0.68 137.74 ? C21 9MZ 404 A 1 HETATM 15 N N18 9MZ . A . E 4 46.22 -20.95 13.183 0.68 136.29 ? N18 9MZ 404 A 1 HETATM 16 C C17 9MZ . A . E 4 46.361 -19.766 12.587 0.68 135.72 ? C17 9MZ 404 A 1 HETATM 17 O O19 9MZ . A . E 4 45.721 -19.379 11.624 0.68 136.79 ? O19 9MZ 404 A 1 HETATM 18 C C16 9MZ . A . E 4 47.418 -18.874 13.187 0.68 132.26 ? C16 9MZ 404 A 1 HETATM 19 C C13 9MZ . A . E 4 47.117 -18.616 14.659 0.68 130.14 ? C13 9MZ 404 A 1 HETATM 20 C C14 9MZ . A . E 4 47.564 -19.739 15.562 0.68 128.92 ? C14 9MZ 404 A 1 HETATM 21 O O20 9MZ . A . E 4 47.06 -20.849 15.538 0.68 128.75 ? O20 9MZ 404 A 1 HETATM 22 N N15 9MZ . A . E 4 48.56 -19.395 16.388 0.68 125.73 ? N15 9MZ 404 A 1 HETATM 23 C C11 9MZ . A . E 4 49.059 -18.264 16.146 0.68 121.98 ? C11 9MZ 404 A 1 HETATM 24 S S12 9MZ . A . E 4 48.101 -17.279 15.224 0.68 126.11 ? S12 9MZ 404 A 1 HETATM 25 N N10 9MZ . A . E 4 50.285 -17.928 16.501 0.68 115.81 ? N10 9MZ 404 A 1 HETATM 26 N N9 9MZ . A . E 4 51.204 -18.058 15.567 0.68 113.01 ? N9 9MZ 404 A 1 HETATM 27 C C8 9MZ . A . E 4 52.355 -17.623 15.785 0.68 110.6 ? C8 9MZ 404 A 1 HETATM 28 C C3 9MZ . A . E 4 55.445 -17.98 12.91 0.68 99.13 ? C3 9MZ 404 A 1 HETATM 29 C C1 9MZ . A . E 4 54.694 -17.284 15.079 0.68 93.59 ? C1 9MZ 404 A 1 HETATM 30 O O1 9MZ . A . E 4 54.949 -16.722 16.297 0.68 73.41 ? O1 9MZ 404 A 1 HETATM 31 H H2 9MZ . A . E 4 56.703 -17.042 14.369 0.68 118.82 ? H2 9MZ 404 A 1 HETATM 32 H H4 9MZ . A . E 4 53.972 -18.891 11.65 0.68 116.58 ? H4 9MZ 404 A 1 HETATM 33 H H5 9MZ . A . E 4 52.165 -18.686 13.321 0.68 116.62 ? H5 9MZ 404 A 1 HETATM 34 H H26 9MZ . A . E 4 44.029 -20.619 11.67 0.68 166.29 ? H26 9MZ 404 A 1 HETATM 35 H H24 9MZ . A . E 4 42.813 -24.725 11.814 0.68 168.98 ? H24 9MZ 404 A 1 HETATM 36 H H23 9MZ . A . E 4 44.776 -25.26 13.221 0.68 167.05 ? H23 9MZ 404 A 1 HETATM 37 H H22 9MZ . A . E 4 46.363 -23.473 13.852 0.68 165.5 ? H22 9MZ 404 A 1 HETATM 38 H H161 9MZ . A . E 4 47.447 -17.925 12.647 0.68 158.62 ? H161 9MZ 404 A 1 HETATM 39 H H162 9MZ . A . E 4 48.396 -19.348 13.091 0.68 158.62 ? H162 9MZ 404 A 1 HETATM 40 H H13 9MZ . A . E 4 46.046 -18.409 14.798 0.68 156.09 ? H13 9MZ 404 A 1 HETATM 41 H H8 9MZ . A . E 4 52.575 -17.168 16.736 0.68 132.64 ? H8 9MZ 404 A 1 HETATM 42 H H3 9MZ . A . E 4 56.236 -18.07 12.175 0.68 118.87 ? H3 9MZ 404 A 1 HETATM 43 H HO1 9MZ . A . E 4 55.893 -16.525 16.37 0.68 88.01 ? HO1 9MZ 404 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 414 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #