data_4E2P # _model_server_result.job_id 9FdUzMPVv7-BYijmMVASvQ _model_server_result.datetime_utc '2024-10-10 07:24:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 4E2P # _exptl.entry_id 4E2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E2P _cell.length_a 56.14 _cell.length_b 72.29 _cell.length_c 103.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 78 A SER 58 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc2 A OG1 THR 90 A THR 70 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 A SG CYS 366 A CYS 346 1_555 B FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 B FE HEM . A HEM 401 1_555 G O HOH . A HOH 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc5 E MG MG . A MG 404 1_555 G O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc6 F MG MG . A MG 405 1_555 G O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4E2P _atom_sites.fract_transf_matrix[1][1] 0.017813 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013833 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 401 1 HEM HEM . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 3 MG A 1 404 3 MG MG . F 3 MG A 1 405 4 MG MG . G 4 HOH A 1 501 2 HOH HOH . G 4 HOH A 2 502 3 HOH HOH . G 4 HOH A 3 503 2 HOH HOH . G 4 HOH A 4 504 3 HOH HOH . G 4 HOH A 5 505 4 HOH HOH . G 4 HOH A 6 506 5 HOH HOH . G 4 HOH A 7 507 6 HOH HOH . G 4 HOH A 8 508 7 HOH HOH . G 4 HOH A 9 509 8 HOH HOH . G 4 HOH A 10 510 9 HOH HOH . G 4 HOH A 11 511 10 HOH HOH . G 4 HOH A 12 512 11 HOH HOH . G 4 HOH A 13 513 13 HOH HOH . G 4 HOH A 14 514 14 HOH HOH . G 4 HOH A 15 515 15 HOH HOH . G 4 HOH A 16 516 16 HOH HOH . G 4 HOH A 17 517 17 HOH HOH . G 4 HOH A 18 518 18 HOH HOH . G 4 HOH A 19 519 19 HOH HOH . G 4 HOH A 20 520 21 HOH HOH . G 4 HOH A 21 521 22 HOH HOH . G 4 HOH A 22 522 23 HOH HOH . G 4 HOH A 23 523 24 HOH HOH . G 4 HOH A 24 524 25 HOH HOH . G 4 HOH A 25 525 26 HOH HOH . G 4 HOH A 26 526 27 HOH HOH . G 4 HOH A 27 527 28 HOH HOH . G 4 HOH A 28 528 29 HOH HOH . G 4 HOH A 29 529 30 HOH HOH . G 4 HOH A 30 530 31 HOH HOH . G 4 HOH A 31 531 32 HOH HOH . G 4 HOH A 32 532 33 HOH HOH . G 4 HOH A 33 533 34 HOH HOH . G 4 HOH A 34 534 35 HOH HOH . G 4 HOH A 35 535 36 HOH HOH . G 4 HOH A 36 536 37 HOH HOH . G 4 HOH A 37 537 38 HOH HOH . G 4 HOH A 38 538 39 HOH HOH . G 4 HOH A 39 539 40 HOH HOH . G 4 HOH A 40 540 41 HOH HOH . G 4 HOH A 41 541 42 HOH HOH . G 4 HOH A 42 542 43 HOH HOH . G 4 HOH A 43 543 44 HOH HOH . G 4 HOH A 44 544 45 HOH HOH . G 4 HOH A 45 545 46 HOH HOH . G 4 HOH A 46 546 47 HOH HOH . G 4 HOH A 47 547 48 HOH HOH . G 4 HOH A 48 548 49 HOH HOH . G 4 HOH A 49 549 51 HOH HOH . G 4 HOH A 50 550 52 HOH HOH . G 4 HOH A 51 551 53 HOH HOH . G 4 HOH A 52 552 54 HOH HOH . G 4 HOH A 53 553 56 HOH HOH . G 4 HOH A 54 554 57 HOH HOH . G 4 HOH A 55 555 58 HOH HOH . G 4 HOH A 56 556 59 HOH HOH . G 4 HOH A 57 557 61 HOH HOH . G 4 HOH A 58 558 62 HOH HOH . G 4 HOH A 59 559 63 HOH HOH . G 4 HOH A 60 560 64 HOH HOH . G 4 HOH A 61 561 65 HOH HOH . G 4 HOH A 62 562 66 HOH HOH . G 4 HOH A 63 563 67 HOH HOH . G 4 HOH A 64 564 68 HOH HOH . G 4 HOH A 65 565 69 HOH HOH . G 4 HOH A 66 566 70 HOH HOH . G 4 HOH A 67 567 71 HOH HOH . G 4 HOH A 68 568 72 HOH HOH . G 4 HOH A 69 569 73 HOH HOH . G 4 HOH A 70 570 74 HOH HOH . G 4 HOH A 71 571 75 HOH HOH . G 4 HOH A 72 572 76 HOH HOH . G 4 HOH A 73 573 77 HOH HOH . G 4 HOH A 74 574 78 HOH HOH . G 4 HOH A 75 575 79 HOH HOH . G 4 HOH A 76 576 80 HOH HOH . G 4 HOH A 77 577 81 HOH HOH . G 4 HOH A 78 578 82 HOH HOH . G 4 HOH A 79 579 83 HOH HOH . G 4 HOH A 80 580 84 HOH HOH . G 4 HOH A 81 581 85 HOH HOH . G 4 HOH A 82 582 86 HOH HOH . G 4 HOH A 83 583 87 HOH HOH . G 4 HOH A 84 584 88 HOH HOH . G 4 HOH A 85 585 89 HOH HOH . G 4 HOH A 86 586 90 HOH HOH . G 4 HOH A 87 587 91 HOH HOH . G 4 HOH A 88 588 92 HOH HOH . G 4 HOH A 89 589 93 HOH HOH . G 4 HOH A 90 590 94 HOH HOH . G 4 HOH A 91 591 95 HOH HOH . G 4 HOH A 92 592 96 HOH HOH . G 4 HOH A 93 593 97 HOH HOH . G 4 HOH A 94 594 98 HOH HOH . G 4 HOH A 95 595 100 HOH HOH . G 4 HOH A 96 596 101 HOH HOH . G 4 HOH A 97 597 102 HOH HOH . G 4 HOH A 98 598 103 HOH HOH . G 4 HOH A 99 599 104 HOH HOH . G 4 HOH A 100 600 106 HOH HOH . G 4 HOH A 101 601 107 HOH HOH . G 4 HOH A 102 602 108 HOH HOH . G 4 HOH A 103 603 109 HOH HOH . G 4 HOH A 104 604 110 HOH HOH . G 4 HOH A 105 605 111 HOH HOH . G 4 HOH A 106 606 112 HOH HOH . G 4 HOH A 107 607 113 HOH HOH . G 4 HOH A 108 608 114 HOH HOH . G 4 HOH A 109 609 115 HOH HOH . G 4 HOH A 110 610 116 HOH HOH . G 4 HOH A 111 611 117 HOH HOH . G 4 HOH A 112 612 118 HOH HOH . G 4 HOH A 113 613 119 HOH HOH . G 4 HOH A 114 614 120 HOH HOH . G 4 HOH A 115 615 121 HOH HOH . G 4 HOH A 116 616 122 HOH HOH . G 4 HOH A 117 617 123 HOH HOH . G 4 HOH A 118 618 124 HOH HOH . G 4 HOH A 119 619 125 HOH HOH . G 4 HOH A 120 620 126 HOH HOH . G 4 HOH A 121 621 127 HOH HOH . G 4 HOH A 122 622 128 HOH HOH . G 4 HOH A 123 623 129 HOH HOH . G 4 HOH A 124 624 130 HOH HOH . G 4 HOH A 125 625 131 HOH HOH . G 4 HOH A 126 626 132 HOH HOH . G 4 HOH A 127 627 133 HOH HOH . G 4 HOH A 128 628 134 HOH HOH . G 4 HOH A 129 629 135 HOH HOH . G 4 HOH A 130 630 136 HOH HOH . G 4 HOH A 131 631 137 HOH HOH . G 4 HOH A 132 632 138 HOH HOH . G 4 HOH A 133 633 139 HOH HOH . G 4 HOH A 134 634 140 HOH HOH . G 4 HOH A 135 635 141 HOH HOH . G 4 HOH A 136 636 142 HOH HOH . G 4 HOH A 137 637 143 HOH HOH . G 4 HOH A 138 638 144 HOH HOH . G 4 HOH A 139 639 145 HOH HOH . G 4 HOH A 140 640 146 HOH HOH . G 4 HOH A 141 641 147 HOH HOH . G 4 HOH A 142 642 148 HOH HOH . G 4 HOH A 143 643 149 HOH HOH . G 4 HOH A 144 644 150 HOH HOH . G 4 HOH A 145 645 151 HOH HOH . G 4 HOH A 146 646 152 HOH HOH . G 4 HOH A 147 647 153 HOH HOH . G 4 HOH A 148 648 154 HOH HOH . G 4 HOH A 149 649 155 HOH HOH . G 4 HOH A 150 650 156 HOH HOH . G 4 HOH A 151 651 157 HOH HOH . G 4 HOH A 152 652 159 HOH HOH . G 4 HOH A 153 653 160 HOH HOH . G 4 HOH A 154 654 161 HOH HOH . G 4 HOH A 155 655 163 HOH HOH . G 4 HOH A 156 656 164 HOH HOH . G 4 HOH A 157 657 165 HOH HOH . G 4 HOH A 158 658 166 HOH HOH . G 4 HOH A 159 659 167 HOH HOH . G 4 HOH A 160 660 168 HOH HOH . G 4 HOH A 161 661 169 HOH HOH . G 4 HOH A 162 662 170 HOH HOH . G 4 HOH A 163 663 171 HOH HOH . G 4 HOH A 164 664 172 HOH HOH . G 4 HOH A 165 665 173 HOH HOH . G 4 HOH A 166 666 174 HOH HOH . G 4 HOH A 167 667 177 HOH HOH . G 4 HOH A 168 668 178 HOH HOH . G 4 HOH A 169 669 180 HOH HOH . G 4 HOH A 170 670 181 HOH HOH . G 4 HOH A 171 671 182 HOH HOH . G 4 HOH A 172 672 183 HOH HOH . G 4 HOH A 173 673 184 HOH HOH . G 4 HOH A 174 674 186 HOH HOH . G 4 HOH A 175 675 187 HOH HOH . G 4 HOH A 176 676 188 HOH HOH . G 4 HOH A 177 677 189 HOH HOH . G 4 HOH A 178 678 190 HOH HOH . G 4 HOH A 179 679 191 HOH HOH . G 4 HOH A 180 680 192 HOH HOH . G 4 HOH A 181 681 193 HOH HOH . G 4 HOH A 182 682 194 HOH HOH . G 4 HOH A 183 683 195 HOH HOH . G 4 HOH A 184 684 197 HOH HOH . G 4 HOH A 185 685 198 HOH HOH . G 4 HOH A 186 686 199 HOH HOH . G 4 HOH A 187 687 200 HOH HOH . G 4 HOH A 188 688 201 HOH HOH . G 4 HOH A 189 689 202 HOH HOH . G 4 HOH A 190 690 203 HOH HOH . G 4 HOH A 191 691 204 HOH HOH . G 4 HOH A 192 692 205 HOH HOH . G 4 HOH A 193 693 206 HOH HOH . G 4 HOH A 194 694 210 HOH HOH . G 4 HOH A 195 695 211 HOH HOH . G 4 HOH A 196 696 212 HOH HOH . G 4 HOH A 197 697 213 HOH HOH . G 4 HOH A 198 698 214 HOH HOH . G 4 HOH A 199 699 215 HOH HOH . G 4 HOH A 200 700 217 HOH HOH . G 4 HOH A 201 701 218 HOH HOH . G 4 HOH A 202 702 219 HOH HOH . G 4 HOH A 203 703 220 HOH HOH . G 4 HOH A 204 704 221 HOH HOH . G 4 HOH A 205 705 222 HOH HOH . G 4 HOH A 206 706 224 HOH HOH . G 4 HOH A 207 707 225 HOH HOH . G 4 HOH A 208 708 226 HOH HOH . G 4 HOH A 209 709 228 HOH HOH . G 4 HOH A 210 710 229 HOH HOH . G 4 HOH A 211 711 231 HOH HOH . G 4 HOH A 212 712 232 HOH HOH . G 4 HOH A 213 713 233 HOH HOH . G 4 HOH A 214 714 235 HOH HOH . G 4 HOH A 215 715 236 HOH HOH . G 4 HOH A 216 716 237 HOH HOH . G 4 HOH A 217 717 238 HOH HOH . G 4 HOH A 218 718 239 HOH HOH . G 4 HOH A 219 719 240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 18.995 _atom_site.Cartn_y 62.189 _atom_site.Cartn_z 14.487 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #