data_4E4S # _model_server_result.job_id 15Iqt533R1S1379KNh2B1Q _model_server_result.datetime_utc '2025-03-06 02:03:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":201}' # _entry.id 4E4S # _exptl.entry_id 4E4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.16 _cell.angle_gamma 90 _cell.entry_id 4E4S _cell.length_a 49.371 _cell.length_b 164.588 _cell.length_c 54.103 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,N,O,P,Q,U 1 1 C,D,E,I,J,K,L,M,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 6 C CYS 6 1_555 C SG CYS 26 C CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 D SG CYS 6 D CYS 6 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 F SG CYS 6 F CYS 6 1_555 F SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 F OE2 GLU 16 F GLU 16 1_555 O MG MG . F MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4E4S _atom_sites.fract_transf_matrix[1][1] 0.020255 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.01039 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GOL A 1 201 1 GOL GOL . H 2 GOL B 1 201 1 GOL GOL . I 2 GOL C 1 201 1 GOL GOL . J 2 GOL C 1 202 1 GOL GOL . K 2 GOL D 1 201 1 GOL GOL . L 2 GOL E 1 201 1 GOL GOL . M 2 GOL E 1 202 1 GOL GOL . N 2 GOL F 1 201 1 GOL GOL . O 3 MG F 1 202 1 MG MG . P 4 HOH A 1 301 2 HOH HOH . P 4 HOH A 2 302 8 HOH HOH . P 4 HOH A 3 303 11 HOH HOH . P 4 HOH A 4 304 18 HOH HOH . P 4 HOH A 5 305 19 HOH HOH . P 4 HOH A 6 306 23 HOH HOH . P 4 HOH A 7 307 36 HOH HOH . P 4 HOH A 8 308 40 HOH HOH . P 4 HOH A 9 309 42 HOH HOH . P 4 HOH A 10 310 49 HOH HOH . P 4 HOH A 11 311 50 HOH HOH . P 4 HOH A 12 312 61 HOH HOH . P 4 HOH A 13 313 72 HOH HOH . P 4 HOH A 14 314 74 HOH HOH . P 4 HOH A 15 315 76 HOH HOH . P 4 HOH A 16 316 79 HOH HOH . P 4 HOH A 17 317 84 HOH HOH . P 4 HOH A 18 318 85 HOH HOH . P 4 HOH A 19 319 90 HOH HOH . P 4 HOH A 20 320 102 HOH HOH . P 4 HOH A 21 321 103 HOH HOH . P 4 HOH A 22 322 108 HOH HOH . P 4 HOH A 23 323 117 HOH HOH . P 4 HOH A 24 324 125 HOH HOH . P 4 HOH A 25 325 133 HOH HOH . P 4 HOH A 26 326 145 HOH HOH . P 4 HOH A 27 327 146 HOH HOH . P 4 HOH A 28 328 147 HOH HOH . P 4 HOH A 29 329 148 HOH HOH . P 4 HOH A 30 330 149 HOH HOH . P 4 HOH A 31 331 150 HOH HOH . P 4 HOH A 32 332 152 HOH HOH . P 4 HOH A 33 333 153 HOH HOH . P 4 HOH A 34 334 154 HOH HOH . P 4 HOH A 35 335 159 HOH HOH . P 4 HOH A 36 336 176 HOH HOH . P 4 HOH A 37 337 178 HOH HOH . P 4 HOH A 38 338 231 HOH HOH . P 4 HOH A 39 339 233 HOH HOH . P 4 HOH A 40 340 236 HOH HOH . P 4 HOH A 41 341 253 HOH HOH . P 4 HOH A 42 342 262 HOH HOH . P 4 HOH A 43 343 267 HOH HOH . P 4 HOH A 44 344 272 HOH HOH . P 4 HOH A 45 345 273 HOH HOH . P 4 HOH A 46 346 275 HOH HOH . P 4 HOH A 47 347 276 HOH HOH . Q 4 HOH B 1 301 5 HOH HOH . Q 4 HOH B 2 302 10 HOH HOH . Q 4 HOH B 3 303 20 HOH HOH . Q 4 HOH B 4 304 25 HOH HOH . Q 4 HOH B 5 305 28 HOH HOH . Q 4 HOH B 6 306 39 HOH HOH . Q 4 HOH B 7 307 53 HOH HOH . Q 4 HOH B 8 308 59 HOH HOH . Q 4 HOH B 9 309 64 HOH HOH . Q 4 HOH B 10 310 65 HOH HOH . Q 4 HOH B 11 311 81 HOH HOH . Q 4 HOH B 12 312 82 HOH HOH . Q 4 HOH B 13 313 96 HOH HOH . Q 4 HOH B 14 314 105 HOH HOH . Q 4 HOH B 15 315 113 HOH HOH . Q 4 HOH B 16 316 114 HOH HOH . Q 4 HOH B 17 317 115 HOH HOH . Q 4 HOH B 18 318 118 HOH HOH . Q 4 HOH B 19 319 119 HOH HOH . Q 4 HOH B 20 320 128 HOH HOH . Q 4 HOH B 21 321 139 HOH HOH . Q 4 HOH B 22 322 151 HOH HOH . Q 4 HOH B 23 323 161 HOH HOH . Q 4 HOH B 24 324 164 HOH HOH . Q 4 HOH B 25 325 198 HOH HOH . Q 4 HOH B 26 326 202 HOH HOH . Q 4 HOH B 27 327 217 HOH HOH . Q 4 HOH B 28 328 245 HOH HOH . Q 4 HOH B 29 329 249 HOH HOH . Q 4 HOH B 30 330 277 HOH HOH . Q 4 HOH B 31 331 282 HOH HOH . Q 4 HOH B 32 332 285 HOH HOH . Q 4 HOH B 33 333 300 HOH HOH . Q 4 HOH B 34 334 325 HOH HOH . Q 4 HOH B 35 335 328 HOH HOH . R 4 HOH C 1 301 7 HOH HOH . R 4 HOH C 2 302 24 HOH HOH . R 4 HOH C 3 303 43 HOH HOH . R 4 HOH C 4 304 55 HOH HOH . R 4 HOH C 5 305 56 HOH HOH . R 4 HOH C 6 306 63 HOH HOH . R 4 HOH C 7 307 66 HOH HOH . R 4 HOH C 8 308 71 HOH HOH . R 4 HOH C 9 309 86 HOH HOH . R 4 HOH C 10 310 91 HOH HOH . R 4 HOH C 11 311 92 HOH HOH . R 4 HOH C 12 312 104 HOH HOH . R 4 HOH C 13 313 109 HOH HOH . R 4 HOH C 14 314 121 HOH HOH . R 4 HOH C 15 315 124 HOH HOH . R 4 HOH C 16 316 156 HOH HOH . R 4 HOH C 17 317 165 HOH HOH . R 4 HOH C 18 318 167 HOH HOH . R 4 HOH C 19 319 169 HOH HOH . R 4 HOH C 20 320 173 HOH HOH . R 4 HOH C 21 321 189 HOH HOH . R 4 HOH C 22 322 193 HOH HOH . R 4 HOH C 23 323 199 HOH HOH . R 4 HOH C 24 324 206 HOH HOH . R 4 HOH C 25 325 209 HOH HOH . R 4 HOH C 26 326 213 HOH HOH . R 4 HOH C 27 327 237 HOH HOH . R 4 HOH C 28 328 240 HOH HOH . R 4 HOH C 29 329 241 HOH HOH . R 4 HOH C 30 330 248 HOH HOH . R 4 HOH C 31 331 254 HOH HOH . R 4 HOH C 32 332 256 HOH HOH . R 4 HOH C 33 333 257 HOH HOH . R 4 HOH C 34 334 258 HOH HOH . R 4 HOH C 35 335 259 HOH HOH . R 4 HOH C 36 336 263 HOH HOH . R 4 HOH C 37 337 265 HOH HOH . R 4 HOH C 38 338 292 HOH HOH . R 4 HOH C 39 339 305 HOH HOH . R 4 HOH C 40 340 320 HOH HOH . R 4 HOH C 41 341 331 HOH HOH . S 4 HOH D 1 301 1 HOH HOH . S 4 HOH D 2 302 13 HOH HOH . S 4 HOH D 3 303 30 HOH HOH . S 4 HOH D 4 304 32 HOH HOH . S 4 HOH D 5 305 57 HOH HOH . S 4 HOH D 6 306 58 HOH HOH . S 4 HOH D 7 307 67 HOH HOH . S 4 HOH D 8 308 77 HOH HOH . S 4 HOH D 9 309 106 HOH HOH . S 4 HOH D 10 310 131 HOH HOH . S 4 HOH D 11 311 132 HOH HOH . S 4 HOH D 12 312 135 HOH HOH . S 4 HOH D 13 313 141 HOH HOH . S 4 HOH D 14 314 144 HOH HOH . S 4 HOH D 15 315 157 HOH HOH . S 4 HOH D 16 316 171 HOH HOH . S 4 HOH D 17 317 201 HOH HOH . S 4 HOH D 18 318 203 HOH HOH . S 4 HOH D 19 319 204 HOH HOH . S 4 HOH D 20 320 208 HOH HOH . S 4 HOH D 21 321 230 HOH HOH . S 4 HOH D 22 322 235 HOH HOH . S 4 HOH D 23 323 250 HOH HOH . S 4 HOH D 24 324 252 HOH HOH . S 4 HOH D 25 325 266 HOH HOH . S 4 HOH D 26 326 270 HOH HOH . S 4 HOH D 27 327 293 HOH HOH . S 4 HOH D 28 328 316 HOH HOH . S 4 HOH D 29 329 319 HOH HOH . S 4 HOH D 30 330 330 HOH HOH . T 4 HOH E 1 301 4 HOH HOH . T 4 HOH E 2 302 9 HOH HOH . T 4 HOH E 3 303 12 HOH HOH . T 4 HOH E 4 304 14 HOH HOH . T 4 HOH E 5 305 15 HOH HOH . T 4 HOH E 6 306 17 HOH HOH . T 4 HOH E 7 307 27 HOH HOH . T 4 HOH E 8 308 35 HOH HOH . T 4 HOH E 9 309 37 HOH HOH . T 4 HOH E 10 310 48 HOH HOH . T 4 HOH E 11 311 60 HOH HOH . T 4 HOH E 12 312 68 HOH HOH . T 4 HOH E 13 313 70 HOH HOH . T 4 HOH E 14 314 75 HOH HOH . T 4 HOH E 15 315 83 HOH HOH . T 4 HOH E 16 316 87 HOH HOH . T 4 HOH E 17 317 98 HOH HOH . T 4 HOH E 18 318 107 HOH HOH . T 4 HOH E 19 319 116 HOH HOH . T 4 HOH E 20 320 122 HOH HOH . T 4 HOH E 21 321 123 HOH HOH . T 4 HOH E 22 322 126 HOH HOH . T 4 HOH E 23 323 127 HOH HOH . T 4 HOH E 24 324 129 HOH HOH . T 4 HOH E 25 325 130 HOH HOH . T 4 HOH E 26 326 142 HOH HOH . T 4 HOH E 27 327 143 HOH HOH . T 4 HOH E 28 328 162 HOH HOH . T 4 HOH E 29 329 163 HOH HOH . T 4 HOH E 30 330 166 HOH HOH . T 4 HOH E 31 331 175 HOH HOH . T 4 HOH E 32 332 177 HOH HOH . T 4 HOH E 33 333 179 HOH HOH . T 4 HOH E 34 334 181 HOH HOH . T 4 HOH E 35 335 184 HOH HOH . T 4 HOH E 36 336 186 HOH HOH . T 4 HOH E 37 337 192 HOH HOH . T 4 HOH E 38 338 195 HOH HOH . T 4 HOH E 39 339 205 HOH HOH . T 4 HOH E 40 340 207 HOH HOH . T 4 HOH E 41 341 210 HOH HOH . T 4 HOH E 42 342 211 HOH HOH . T 4 HOH E 43 343 218 HOH HOH . T 4 HOH E 44 344 221 HOH HOH . T 4 HOH E 45 345 227 HOH HOH . T 4 HOH E 46 346 239 HOH HOH . T 4 HOH E 47 347 242 HOH HOH . T 4 HOH E 48 348 243 HOH HOH . T 4 HOH E 49 349 246 HOH HOH . T 4 HOH E 50 350 260 HOH HOH . T 4 HOH E 51 351 281 HOH HOH . T 4 HOH E 52 352 290 HOH HOH . T 4 HOH E 53 353 306 HOH HOH . T 4 HOH E 54 354 326 HOH HOH . T 4 HOH E 55 355 332 HOH HOH . T 4 HOH E 56 356 333 HOH HOH . U 4 HOH F 1 301 16 HOH HOH . U 4 HOH F 2 302 22 HOH HOH . U 4 HOH F 3 303 26 HOH HOH . U 4 HOH F 4 304 31 HOH HOH . U 4 HOH F 5 305 33 HOH HOH . U 4 HOH F 6 306 41 HOH HOH . U 4 HOH F 7 307 44 HOH HOH . U 4 HOH F 8 308 46 HOH HOH . U 4 HOH F 9 309 54 HOH HOH . U 4 HOH F 10 310 62 HOH HOH . U 4 HOH F 11 311 69 HOH HOH . U 4 HOH F 12 312 88 HOH HOH . U 4 HOH F 13 313 95 HOH HOH . U 4 HOH F 14 314 99 HOH HOH . U 4 HOH F 15 315 101 HOH HOH . U 4 HOH F 16 316 111 HOH HOH . U 4 HOH F 17 317 112 HOH HOH . U 4 HOH F 18 318 155 HOH HOH . U 4 HOH F 19 319 158 HOH HOH . U 4 HOH F 20 320 160 HOH HOH . U 4 HOH F 21 321 191 HOH HOH . U 4 HOH F 22 322 196 HOH HOH . U 4 HOH F 23 323 216 HOH HOH . U 4 HOH F 24 324 224 HOH HOH . U 4 HOH F 25 325 244 HOH HOH . U 4 HOH F 26 326 271 HOH HOH . U 4 HOH F 27 327 274 HOH HOH . U 4 HOH F 28 328 283 HOH HOH . U 4 HOH F 29 329 286 HOH HOH . U 4 HOH F 30 330 315 HOH HOH . U 4 HOH F 31 331 324 HOH HOH . U 4 HOH F 32 332 327 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 2 -18.908 -64.214 63.486 1 50.72 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . H 2 -20.14 -64.819 63.836 1 42.34 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . H 2 -18.888 -63.805 62.009 1 56.39 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . H 2 -18.928 -62.401 61.856 1 56.64 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . H 2 -17.612 -64.329 61.362 1 61.29 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . H 2 -17.463 -63.766 60.076 1 62.99 ? O3 GOL 201 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #