data_4E5T
#
_model_server_result.job_id            5DDfPnmez5Np9L4V_qOSOw 
_model_server_result.datetime_utc      '2024-12-22 06:11:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4e5t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    4E5T 
#
_exptl.entry_id    4E5T 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4E5T 
_cell.length_a            98.9 
_cell.length_b            156.88 
_cell.length_c            218.24 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4E5T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 240 A GLU 239 1_555 I MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc2 A OE1 GLU 266 A GLU 265 1_555 I MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc3 B OE2 GLU 240 B GLU 239 1_555 J MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc4 B OE1 GLU 266 B GLU 265 1_555 J MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc5 C OE2 GLU 240 C GLU 239 1_555 K MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc6 C OE1 GLU 266 C GLU 265 1_555 K MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc7 D OE2 GLU 240 D GLU 239 1_555 L MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc8 D OE1 GLU 266 D GLU 265 1_555 L MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc9 E OE2 GLU 240 E GLU 239 1_555 M MG MG . E MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc10 E OE1 GLU 266 E GLU 265 1_555 M MG MG . E MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc11 F OE2 GLU 240 F GLU 239 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc12 F OE1 GLU 266 F GLU 265 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc13 F OE2 GLU 266 F GLU 265 1_555 N MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? 
metalc ? metalc14 G OE2 GLU 240 G GLU 239 1_555 O MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? 
metalc ? metalc15 G OE1 GLU 266 G GLU 265 1_555 O MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc16 G OE2 GLU 266 G GLU 265 1_555 O MG MG . G MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc17 H OE2 GLU 240 H GLU 239 1_555 P MG MG . H MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc18 H OE1 GLU 266 H GLU 265 1_555 P MG MG . H MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4E5T 
_atom_sites.fract_transf_matrix[1][1]    0.010111 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006374 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004582 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 MG A 1 501 1 MG MG . 
J 2 MG B 1 501 1 MG MG . 
K 2 MG C 1 501 1 MG MG . 
L 2 MG D 1 501 1 MG MG . 
M 2 MG E 1 501 1 MG MG . 
N 2 MG F 1 501 1 MG MG . 
O 2 MG G 1 501 1 MG MG . 
P 2 MG H 1 501 1 MG MG . 
Q 3 HOH A 1 601 6 HOH HOH . 
Q 3 HOH A 2 602 15 HOH HOH . 
Q 3 HOH A 3 603 21 HOH HOH . 
Q 3 HOH A 4 604 31 HOH HOH . 
Q 3 HOH A 5 605 37 HOH HOH . 
Q 3 HOH A 6 606 46 HOH HOH . 
Q 3 HOH A 7 607 51 HOH HOH . 
Q 3 HOH A 8 608 65 HOH HOH . 
R 3 HOH B 1 601 7 HOH HOH . 
R 3 HOH B 2 602 11 HOH HOH . 
R 3 HOH B 3 603 28 HOH HOH . 
R 3 HOH B 4 604 30 HOH HOH . 
R 3 HOH B 5 605 35 HOH HOH . 
R 3 HOH B 6 606 36 HOH HOH . 
R 3 HOH B 7 607 47 HOH HOH . 
R 3 HOH B 8 608 50 HOH HOH . 
R 3 HOH B 9 609 57 HOH HOH . 
S 3 HOH C 1 601 1 HOH HOH . 
S 3 HOH C 2 602 10 HOH HOH . 
S 3 HOH C 3 603 32 HOH HOH . 
S 3 HOH C 4 604 48 HOH HOH . 
S 3 HOH C 5 605 52 HOH HOH . 
S 3 HOH C 6 606 55 HOH HOH . 
S 3 HOH C 7 607 61 HOH HOH . 
S 3 HOH C 8 608 66 HOH HOH . 
T 3 HOH D 1 601 2 HOH HOH . 
T 3 HOH D 2 602 9 HOH HOH . 
T 3 HOH D 3 603 13 HOH HOH . 
T 3 HOH D 4 604 24 HOH HOH . 
T 3 HOH D 5 605 38 HOH HOH . 
T 3 HOH D 6 606 39 HOH HOH . 
T 3 HOH D 7 607 41 HOH HOH . 
T 3 HOH D 8 608 44 HOH HOH . 
T 3 HOH D 9 609 53 HOH HOH . 
T 3 HOH D 10 610 60 HOH HOH . 
U 3 HOH E 1 601 5 HOH HOH . 
U 3 HOH E 2 602 12 HOH HOH . 
U 3 HOH E 3 603 22 HOH HOH . 
U 3 HOH E 4 604 26 HOH HOH . 
U 3 HOH E 5 605 54 HOH HOH . 
U 3 HOH E 6 606 56 HOH HOH . 
U 3 HOH E 7 607 58 HOH HOH . 
U 3 HOH E 8 608 62 HOH HOH . 
U 3 HOH E 9 609 63 HOH HOH . 
V 3 HOH F 1 601 14 HOH HOH . 
V 3 HOH F 2 602 17 HOH HOH . 
V 3 HOH F 3 603 20 HOH HOH . 
V 3 HOH F 4 604 33 HOH HOH . 
V 3 HOH F 5 605 49 HOH HOH . 
W 3 HOH G 1 601 4 HOH HOH . 
W 3 HOH G 2 602 19 HOH HOH . 
W 3 HOH G 3 603 23 HOH HOH . 
W 3 HOH G 4 604 43 HOH HOH . 
W 3 HOH G 5 605 59 HOH HOH . 
W 3 HOH G 6 606 64 HOH HOH . 
X 3 HOH H 1 601 16 HOH HOH . 
X 3 HOH H 2 602 25 HOH HOH . 
X 3 HOH H 3 603 27 HOH HOH . 
X 3 HOH H 4 604 34 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -50.371 
_atom_site.Cartn_y               -12.298 
_atom_site.Cartn_z               -16.832 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        67.34 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              190 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           1 
#