data_4E5U # _model_server_result.job_id Q3_suU2djqtAnbbVjckQUw _model_server_result.datetime_utc '2024-11-14 23:43:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e5u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":303}' # _entry.id 4E5U # _exptl.entry_id 4E5U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E5U _cell.length_a 46.132 _cell.length_b 57.399 _cell.length_c 149.952 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E5U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 63 A PRO 60 1_555 A N MSE 64 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 64 A MSE 61 1_555 A N ALA 65 A ALA 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C LEU 72 A LEU 69 1_555 A N MSE 73 A MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 73 A MSE 70 1_555 A N PHE 74 A PHE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 B C PRO 63 B PRO 60 1_555 B N MSE 64 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 B C MSE 64 B MSE 61 1_555 B N ALA 65 B ALA 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 B C LEU 72 B LEU 69 1_555 B N MSE 73 B MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 B C MSE 73 B MSE 70 1_555 B N PHE 74 B PHE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 B OE2 GLU 15 B GLU 12 1_555 F CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc2 F CA CA . B CA 302 1_555 I O HOH . B HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 A OE1 GLU 15 A GLU 12 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc4 E O1P TMP . B TMP 301 1_555 F CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc5 F CA CA . B CA 302 1_555 I O HOH . B HOH 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc6 A OE1 GLU 159 A GLU 156 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc7 C O2P TMP . A TMP 301 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc8 F CA CA . B CA 302 1_555 I O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc9 B O ALA 149 B ALA 146 1_555 G CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc10 D CA CA . A CA 302 1_555 H O HOH . A HOH 484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc11 B OE2 GLU 159 B GLU 156 1_555 F CA CA . B CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc12 G CA CA . B CA 303 1_555 I O HOH . B HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc13 D CA CA . A CA 302 1_555 H O HOH . A HOH 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc14 G CA CA . B CA 303 1_555 I O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc15 G CA CA . B CA 303 1_555 I O HOH . B HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc16 G CA CA . B CA 303 1_555 I O HOH . B HOH 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc17 D CA CA . A CA 302 1_555 H O HOH . A HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc18 B O ARG 152 B ARG 149 1_555 G CA CA . B CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4E5U _atom_sites.fract_transf_matrix[1][1] 0.021677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TMP A 1 301 301 TMP TMP . D 3 CA A 1 302 3 CA CA . E 2 TMP B 1 301 301 TMP TMP . F 3 CA B 1 302 1 CA CA . G 3 CA B 1 303 2 CA CA . H 4 HOH A 1 401 1 HOH HOH . H 4 HOH A 2 402 5 HOH HOH . H 4 HOH A 3 403 9 HOH HOH . H 4 HOH A 4 404 10 HOH HOH . H 4 HOH A 5 405 13 HOH HOH . H 4 HOH A 6 406 14 HOH HOH . H 4 HOH A 7 407 16 HOH HOH . H 4 HOH A 8 408 17 HOH HOH . H 4 HOH A 9 409 18 HOH HOH . H 4 HOH A 10 410 19 HOH HOH . H 4 HOH A 11 411 21 HOH HOH . H 4 HOH A 12 412 22 HOH HOH . H 4 HOH A 13 413 25 HOH HOH . H 4 HOH A 14 414 26 HOH HOH . H 4 HOH A 15 415 29 HOH HOH . H 4 HOH A 16 416 32 HOH HOH . H 4 HOH A 17 417 33 HOH HOH . H 4 HOH A 18 418 34 HOH HOH . H 4 HOH A 19 419 35 HOH HOH . H 4 HOH A 20 420 38 HOH HOH . H 4 HOH A 21 421 41 HOH HOH . H 4 HOH A 22 422 45 HOH HOH . H 4 HOH A 23 423 47 HOH HOH . H 4 HOH A 24 424 50 HOH HOH . H 4 HOH A 25 425 54 HOH HOH . H 4 HOH A 26 426 55 HOH HOH . H 4 HOH A 27 427 58 HOH HOH . H 4 HOH A 28 428 59 HOH HOH . H 4 HOH A 29 429 62 HOH HOH . H 4 HOH A 30 430 65 HOH HOH . H 4 HOH A 31 431 67 HOH HOH . H 4 HOH A 32 432 68 HOH HOH . H 4 HOH A 33 433 69 HOH HOH . H 4 HOH A 34 434 71 HOH HOH . H 4 HOH A 35 435 73 HOH HOH . H 4 HOH A 36 436 74 HOH HOH . H 4 HOH A 37 437 76 HOH HOH . H 4 HOH A 38 438 77 HOH HOH . H 4 HOH A 39 439 79 HOH HOH . H 4 HOH A 40 440 80 HOH HOH . H 4 HOH A 41 441 82 HOH HOH . H 4 HOH A 42 442 84 HOH HOH . H 4 HOH A 43 443 85 HOH HOH . H 4 HOH A 44 444 86 HOH HOH . H 4 HOH A 45 445 87 HOH HOH . H 4 HOH A 46 446 89 HOH HOH . H 4 HOH A 47 447 92 HOH HOH . H 4 HOH A 48 448 94 HOH HOH . H 4 HOH A 49 449 96 HOH HOH . H 4 HOH A 50 450 97 HOH HOH . H 4 HOH A 51 451 99 HOH HOH . H 4 HOH A 52 452 104 HOH HOH . H 4 HOH A 53 453 105 HOH HOH . H 4 HOH A 54 454 106 HOH HOH . H 4 HOH A 55 455 107 HOH HOH . H 4 HOH A 56 456 108 HOH HOH . H 4 HOH A 57 457 109 HOH HOH . H 4 HOH A 58 458 114 HOH HOH . H 4 HOH A 59 459 118 HOH HOH . H 4 HOH A 60 460 121 HOH HOH . H 4 HOH A 61 461 122 HOH HOH . H 4 HOH A 62 462 127 HOH HOH . H 4 HOH A 63 463 129 HOH HOH . H 4 HOH A 64 464 136 HOH HOH . H 4 HOH A 65 465 142 HOH HOH . H 4 HOH A 66 466 143 HOH HOH . H 4 HOH A 67 467 144 HOH HOH . H 4 HOH A 68 468 145 HOH HOH . H 4 HOH A 69 469 149 HOH HOH . H 4 HOH A 70 470 153 HOH HOH . H 4 HOH A 71 471 155 HOH HOH . H 4 HOH A 72 472 157 HOH HOH . H 4 HOH A 73 473 159 HOH HOH . H 4 HOH A 74 474 162 HOH HOH . H 4 HOH A 75 475 163 HOH HOH . H 4 HOH A 76 476 164 HOH HOH . H 4 HOH A 77 477 165 HOH HOH . H 4 HOH A 78 478 166 HOH HOH . H 4 HOH A 79 479 173 HOH HOH . H 4 HOH A 80 480 175 HOH HOH . H 4 HOH A 81 481 180 HOH HOH . H 4 HOH A 82 482 181 HOH HOH . H 4 HOH A 83 483 184 HOH HOH . H 4 HOH A 84 484 185 HOH HOH . H 4 HOH A 85 485 186 HOH HOH . H 4 HOH A 86 486 187 HOH HOH . H 4 HOH A 87 487 190 HOH HOH . H 4 HOH A 88 488 191 HOH HOH . H 4 HOH A 89 489 193 HOH HOH . H 4 HOH A 90 490 196 HOH HOH . H 4 HOH A 91 491 197 HOH HOH . H 4 HOH A 92 492 199 HOH HOH . H 4 HOH A 93 493 208 HOH HOH . H 4 HOH A 94 494 209 HOH HOH . H 4 HOH A 95 495 210 HOH HOH . H 4 HOH A 96 496 211 HOH HOH . H 4 HOH A 97 497 212 HOH HOH . H 4 HOH A 98 498 213 HOH HOH . H 4 HOH A 99 499 214 HOH HOH . H 4 HOH A 100 500 215 HOH HOH . H 4 HOH A 101 501 217 HOH HOH . H 4 HOH A 102 502 218 HOH HOH . H 4 HOH A 103 503 219 HOH HOH . H 4 HOH A 104 504 220 HOH HOH . I 4 HOH B 1 401 2 HOH HOH . I 4 HOH B 2 402 3 HOH HOH . I 4 HOH B 3 403 4 HOH HOH . I 4 HOH B 4 404 6 HOH HOH . I 4 HOH B 5 405 7 HOH HOH . I 4 HOH B 6 406 8 HOH HOH . I 4 HOH B 7 407 11 HOH HOH . I 4 HOH B 8 408 12 HOH HOH . I 4 HOH B 9 409 15 HOH HOH . I 4 HOH B 10 410 20 HOH HOH . I 4 HOH B 11 411 23 HOH HOH . I 4 HOH B 12 412 24 HOH HOH . I 4 HOH B 13 413 27 HOH HOH . I 4 HOH B 14 414 28 HOH HOH . I 4 HOH B 15 415 30 HOH HOH . I 4 HOH B 16 416 31 HOH HOH . I 4 HOH B 17 417 36 HOH HOH . I 4 HOH B 18 418 37 HOH HOH . I 4 HOH B 19 419 39 HOH HOH . I 4 HOH B 20 420 40 HOH HOH . I 4 HOH B 21 421 42 HOH HOH . I 4 HOH B 22 422 43 HOH HOH . I 4 HOH B 23 423 44 HOH HOH . I 4 HOH B 24 424 46 HOH HOH . I 4 HOH B 25 425 48 HOH HOH . I 4 HOH B 26 426 49 HOH HOH . I 4 HOH B 27 427 51 HOH HOH . I 4 HOH B 28 428 52 HOH HOH . I 4 HOH B 29 429 53 HOH HOH . I 4 HOH B 30 430 56 HOH HOH . I 4 HOH B 31 431 57 HOH HOH . I 4 HOH B 32 432 60 HOH HOH . I 4 HOH B 33 433 61 HOH HOH . I 4 HOH B 34 434 63 HOH HOH . I 4 HOH B 35 435 64 HOH HOH . I 4 HOH B 36 436 66 HOH HOH . I 4 HOH B 37 437 70 HOH HOH . I 4 HOH B 38 438 72 HOH HOH . I 4 HOH B 39 439 75 HOH HOH . I 4 HOH B 40 440 78 HOH HOH . I 4 HOH B 41 441 81 HOH HOH . I 4 HOH B 42 442 83 HOH HOH . I 4 HOH B 43 443 88 HOH HOH . I 4 HOH B 44 444 90 HOH HOH . I 4 HOH B 45 445 91 HOH HOH . I 4 HOH B 46 446 93 HOH HOH . I 4 HOH B 47 447 95 HOH HOH . I 4 HOH B 48 448 98 HOH HOH . I 4 HOH B 49 449 100 HOH HOH . I 4 HOH B 50 450 101 HOH HOH . I 4 HOH B 51 451 102 HOH HOH . I 4 HOH B 52 452 103 HOH HOH . I 4 HOH B 53 453 110 HOH HOH . I 4 HOH B 54 454 111 HOH HOH . I 4 HOH B 55 455 112 HOH HOH . I 4 HOH B 56 456 113 HOH HOH . I 4 HOH B 57 457 115 HOH HOH . I 4 HOH B 58 458 116 HOH HOH . I 4 HOH B 59 459 117 HOH HOH . I 4 HOH B 60 460 119 HOH HOH . I 4 HOH B 61 461 120 HOH HOH . I 4 HOH B 62 462 123 HOH HOH . I 4 HOH B 63 463 124 HOH HOH . I 4 HOH B 64 464 125 HOH HOH . I 4 HOH B 65 465 126 HOH HOH . I 4 HOH B 66 466 128 HOH HOH . I 4 HOH B 67 467 130 HOH HOH . I 4 HOH B 68 468 131 HOH HOH . I 4 HOH B 69 469 132 HOH HOH . I 4 HOH B 70 470 133 HOH HOH . I 4 HOH B 71 471 134 HOH HOH . I 4 HOH B 72 472 135 HOH HOH . I 4 HOH B 73 473 137 HOH HOH . I 4 HOH B 74 474 138 HOH HOH . I 4 HOH B 75 475 139 HOH HOH . I 4 HOH B 76 476 140 HOH HOH . I 4 HOH B 77 477 141 HOH HOH . I 4 HOH B 78 478 146 HOH HOH . I 4 HOH B 79 479 147 HOH HOH . I 4 HOH B 80 480 148 HOH HOH . I 4 HOH B 81 481 150 HOH HOH . I 4 HOH B 82 482 151 HOH HOH . I 4 HOH B 83 483 152 HOH HOH . I 4 HOH B 84 484 154 HOH HOH . I 4 HOH B 85 485 156 HOH HOH . I 4 HOH B 86 486 158 HOH HOH . I 4 HOH B 87 487 160 HOH HOH . I 4 HOH B 88 488 161 HOH HOH . I 4 HOH B 89 489 167 HOH HOH . I 4 HOH B 90 490 168 HOH HOH . I 4 HOH B 91 491 169 HOH HOH . I 4 HOH B 92 492 170 HOH HOH . I 4 HOH B 93 493 171 HOH HOH . I 4 HOH B 94 494 172 HOH HOH . I 4 HOH B 95 495 174 HOH HOH . I 4 HOH B 96 496 176 HOH HOH . I 4 HOH B 97 497 177 HOH HOH . I 4 HOH B 98 498 178 HOH HOH . I 4 HOH B 99 499 179 HOH HOH . I 4 HOH B 100 500 182 HOH HOH . I 4 HOH B 101 501 183 HOH HOH . I 4 HOH B 102 502 188 HOH HOH . I 4 HOH B 103 503 189 HOH HOH . I 4 HOH B 104 504 192 HOH HOH . I 4 HOH B 105 505 194 HOH HOH . I 4 HOH B 106 506 195 HOH HOH . I 4 HOH B 107 507 198 HOH HOH . I 4 HOH B 108 508 200 HOH HOH . I 4 HOH B 109 509 201 HOH HOH . I 4 HOH B 110 510 202 HOH HOH . I 4 HOH B 111 511 203 HOH HOH . I 4 HOH B 112 512 204 HOH HOH . I 4 HOH B 113 513 205 HOH HOH . I 4 HOH B 114 514 206 HOH HOH . I 4 HOH B 115 515 207 HOH HOH . I 4 HOH B 116 516 216 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.785 _atom_site.Cartn_y 9.881 _atom_site.Cartn_z 47.537 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #