data_4E6U # _model_server_result.job_id rR5PocVWXLFHUgQYlKnDfA _model_server_result.datetime_utc '2024-12-26 16:40:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 4E6U # _exptl.entry_id 4E6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4E6U _cell.length_a 75.751 _cell.length_b 75.751 _cell.length_c 119.063 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 37.8755 -65.60229 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 75.751 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4E6U _atom_sites.fract_transf_matrix[1][1] 0.013201 _atom_sites.fract_transf_matrix[1][2] 0.007622 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 1 SO4 SO4 . C 2 SO4 A 1 302 2 SO4 SO4 . D 3 EDO A 1 303 3 EDO EDO . E 3 EDO A 1 304 4 EDO EDO . F 3 EDO A 1 305 5 EDO EDO . G 3 EDO A 1 306 6 EDO EDO . H 3 EDO A 1 307 7 EDO EDO . I 3 EDO A 1 308 8 EDO EDO . J 3 EDO A 1 309 9 EDO EDO . K 3 EDO A 1 310 10 EDO EDO . L 3 EDO A 1 311 11 EDO EDO . M 4 HOH A 1 401 1 HOH HOH . M 4 HOH A 2 402 2 HOH HOH . M 4 HOH A 3 403 3 HOH HOH . M 4 HOH A 4 404 4 HOH HOH . M 4 HOH A 5 405 5 HOH HOH . M 4 HOH A 6 406 6 HOH HOH . M 4 HOH A 7 407 7 HOH HOH . M 4 HOH A 8 408 8 HOH HOH . M 4 HOH A 9 409 9 HOH HOH . M 4 HOH A 10 410 10 HOH HOH . M 4 HOH A 11 411 11 HOH HOH . M 4 HOH A 12 412 12 HOH HOH . M 4 HOH A 13 413 13 HOH HOH . M 4 HOH A 14 414 14 HOH HOH . M 4 HOH A 15 415 15 HOH HOH . M 4 HOH A 16 416 16 HOH HOH . M 4 HOH A 17 417 17 HOH HOH . M 4 HOH A 18 418 18 HOH HOH . M 4 HOH A 19 419 19 HOH HOH . M 4 HOH A 20 420 20 HOH HOH . M 4 HOH A 21 421 21 HOH HOH . M 4 HOH A 22 422 22 HOH HOH . M 4 HOH A 23 423 23 HOH HOH . M 4 HOH A 24 424 24 HOH HOH . M 4 HOH A 25 425 25 HOH HOH . M 4 HOH A 26 426 26 HOH HOH . M 4 HOH A 27 427 27 HOH HOH . M 4 HOH A 28 428 28 HOH HOH . M 4 HOH A 29 429 29 HOH HOH . M 4 HOH A 30 430 30 HOH HOH . M 4 HOH A 31 431 31 HOH HOH . M 4 HOH A 32 432 32 HOH HOH . M 4 HOH A 33 433 33 HOH HOH . M 4 HOH A 34 434 34 HOH HOH . M 4 HOH A 35 435 35 HOH HOH . M 4 HOH A 36 436 36 HOH HOH . M 4 HOH A 37 437 37 HOH HOH . M 4 HOH A 38 438 38 HOH HOH . M 4 HOH A 39 439 39 HOH HOH . M 4 HOH A 40 440 40 HOH HOH . M 4 HOH A 41 441 41 HOH HOH . M 4 HOH A 42 442 42 HOH HOH . M 4 HOH A 43 443 43 HOH HOH . M 4 HOH A 44 444 44 HOH HOH . M 4 HOH A 45 445 45 HOH HOH . M 4 HOH A 46 446 46 HOH HOH . M 4 HOH A 47 447 47 HOH HOH . M 4 HOH A 48 448 48 HOH HOH . M 4 HOH A 49 449 49 HOH HOH . M 4 HOH A 50 450 50 HOH HOH . M 4 HOH A 51 451 51 HOH HOH . M 4 HOH A 52 452 52 HOH HOH . M 4 HOH A 53 453 53 HOH HOH . M 4 HOH A 54 454 54 HOH HOH . M 4 HOH A 55 455 55 HOH HOH . M 4 HOH A 56 456 56 HOH HOH . M 4 HOH A 57 457 57 HOH HOH . M 4 HOH A 58 458 58 HOH HOH . M 4 HOH A 59 459 59 HOH HOH . M 4 HOH A 60 460 60 HOH HOH . M 4 HOH A 61 461 61 HOH HOH . M 4 HOH A 62 462 62 HOH HOH . M 4 HOH A 63 463 63 HOH HOH . M 4 HOH A 64 464 64 HOH HOH . M 4 HOH A 65 465 65 HOH HOH . M 4 HOH A 66 466 66 HOH HOH . M 4 HOH A 67 467 67 HOH HOH . M 4 HOH A 68 468 68 HOH HOH . M 4 HOH A 69 469 69 HOH HOH . M 4 HOH A 70 470 70 HOH HOH . M 4 HOH A 71 471 71 HOH HOH . M 4 HOH A 72 472 72 HOH HOH . M 4 HOH A 73 473 73 HOH HOH . M 4 HOH A 74 474 74 HOH HOH . M 4 HOH A 75 475 75 HOH HOH . M 4 HOH A 76 476 76 HOH HOH . M 4 HOH A 77 477 77 HOH HOH . M 4 HOH A 78 478 78 HOH HOH . M 4 HOH A 79 479 79 HOH HOH . M 4 HOH A 80 480 80 HOH HOH . M 4 HOH A 81 481 81 HOH HOH . M 4 HOH A 82 482 82 HOH HOH . M 4 HOH A 83 483 83 HOH HOH . M 4 HOH A 84 484 84 HOH HOH . M 4 HOH A 85 485 85 HOH HOH . M 4 HOH A 86 486 86 HOH HOH . M 4 HOH A 87 487 87 HOH HOH . M 4 HOH A 88 488 88 HOH HOH . M 4 HOH A 89 489 89 HOH HOH . M 4 HOH A 90 490 90 HOH HOH . M 4 HOH A 91 491 91 HOH HOH . M 4 HOH A 92 492 92 HOH HOH . M 4 HOH A 93 493 93 HOH HOH . M 4 HOH A 94 494 94 HOH HOH . M 4 HOH A 95 495 95 HOH HOH . M 4 HOH A 96 496 96 HOH HOH . M 4 HOH A 97 497 97 HOH HOH . M 4 HOH A 98 498 98 HOH HOH . M 4 HOH A 99 499 99 HOH HOH . M 4 HOH A 100 500 100 HOH HOH . M 4 HOH A 101 501 101 HOH HOH . M 4 HOH A 102 502 102 HOH HOH . M 4 HOH A 103 503 103 HOH HOH . M 4 HOH A 104 504 104 HOH HOH . M 4 HOH A 105 505 105 HOH HOH . M 4 HOH A 106 506 106 HOH HOH . M 4 HOH A 107 507 107 HOH HOH . M 4 HOH A 108 508 108 HOH HOH . M 4 HOH A 109 509 109 HOH HOH . M 4 HOH A 110 510 111 HOH HOH . M 4 HOH A 111 511 112 HOH HOH . M 4 HOH A 112 512 113 HOH HOH . M 4 HOH A 113 513 114 HOH HOH . M 4 HOH A 114 514 115 HOH HOH . M 4 HOH A 115 515 116 HOH HOH . M 4 HOH A 116 516 117 HOH HOH . M 4 HOH A 117 517 118 HOH HOH . M 4 HOH A 118 518 119 HOH HOH . M 4 HOH A 119 519 120 HOH HOH . M 4 HOH A 120 520 121 HOH HOH . M 4 HOH A 121 521 122 HOH HOH . M 4 HOH A 122 522 123 HOH HOH . M 4 HOH A 123 523 124 HOH HOH . M 4 HOH A 124 524 125 HOH HOH . M 4 HOH A 125 525 126 HOH HOH . M 4 HOH A 126 526 127 HOH HOH . M 4 HOH A 127 527 128 HOH HOH . M 4 HOH A 128 528 129 HOH HOH . M 4 HOH A 129 529 130 HOH HOH . M 4 HOH A 130 530 131 HOH HOH . M 4 HOH A 131 531 132 HOH HOH . M 4 HOH A 132 532 133 HOH HOH . M 4 HOH A 133 533 134 HOH HOH . M 4 HOH A 134 534 135 HOH HOH . M 4 HOH A 135 535 136 HOH HOH . M 4 HOH A 136 536 137 HOH HOH . M 4 HOH A 137 537 138 HOH HOH . M 4 HOH A 138 538 139 HOH HOH . M 4 HOH A 139 539 140 HOH HOH . M 4 HOH A 140 540 141 HOH HOH . M 4 HOH A 141 541 142 HOH HOH . M 4 HOH A 142 542 143 HOH HOH . M 4 HOH A 143 543 144 HOH HOH . M 4 HOH A 144 544 145 HOH HOH . M 4 HOH A 145 545 146 HOH HOH . M 4 HOH A 146 546 147 HOH HOH . M 4 HOH A 147 547 148 HOH HOH . M 4 HOH A 148 548 149 HOH HOH . M 4 HOH A 149 549 150 HOH HOH . M 4 HOH A 150 550 151 HOH HOH . M 4 HOH A 151 551 152 HOH HOH . M 4 HOH A 152 552 153 HOH HOH . M 4 HOH A 153 553 154 HOH HOH . M 4 HOH A 154 554 155 HOH HOH . M 4 HOH A 155 555 156 HOH HOH . M 4 HOH A 156 556 157 HOH HOH . M 4 HOH A 157 557 158 HOH HOH . M 4 HOH A 158 558 159 HOH HOH . M 4 HOH A 159 559 160 HOH HOH . M 4 HOH A 160 560 161 HOH HOH . M 4 HOH A 161 561 162 HOH HOH . M 4 HOH A 162 562 163 HOH HOH . M 4 HOH A 163 563 164 HOH HOH . M 4 HOH A 164 564 165 HOH HOH . M 4 HOH A 165 565 166 HOH HOH . M 4 HOH A 166 566 167 HOH HOH . M 4 HOH A 167 567 168 HOH HOH . M 4 HOH A 168 568 169 HOH HOH . M 4 HOH A 169 569 170 HOH HOH . M 4 HOH A 170 570 171 HOH HOH . M 4 HOH A 171 571 172 HOH HOH . M 4 HOH A 172 572 173 HOH HOH . M 4 HOH A 173 573 174 HOH HOH . M 4 HOH A 174 574 175 HOH HOH . M 4 HOH A 175 575 176 HOH HOH . M 4 HOH A 176 576 177 HOH HOH . M 4 HOH A 177 577 178 HOH HOH . M 4 HOH A 178 578 179 HOH HOH . M 4 HOH A 179 579 180 HOH HOH . M 4 HOH A 180 580 181 HOH HOH . M 4 HOH A 181 581 182 HOH HOH . M 4 HOH A 182 582 183 HOH HOH . M 4 HOH A 183 583 184 HOH HOH . M 4 HOH A 184 584 185 HOH HOH . M 4 HOH A 185 585 186 HOH HOH . M 4 HOH A 186 586 187 HOH HOH . M 4 HOH A 187 587 188 HOH HOH . M 4 HOH A 188 588 189 HOH HOH . M 4 HOH A 189 589 190 HOH HOH . M 4 HOH A 190 590 191 HOH HOH . M 4 HOH A 191 591 192 HOH HOH . M 4 HOH A 192 592 193 HOH HOH . M 4 HOH A 193 593 194 HOH HOH . M 4 HOH A 194 594 195 HOH HOH . M 4 HOH A 195 595 196 HOH HOH . M 4 HOH A 196 596 197 HOH HOH . M 4 HOH A 197 597 198 HOH HOH . M 4 HOH A 198 598 199 HOH HOH . M 4 HOH A 199 599 200 HOH HOH . M 4 HOH A 200 600 201 HOH HOH . M 4 HOH A 201 601 202 HOH HOH . M 4 HOH A 202 602 203 HOH HOH . M 4 HOH A 203 603 204 HOH HOH . M 4 HOH A 204 604 205 HOH HOH . M 4 HOH A 205 605 206 HOH HOH . M 4 HOH A 206 606 207 HOH HOH . M 4 HOH A 207 607 208 HOH HOH . M 4 HOH A 208 608 209 HOH HOH . M 4 HOH A 209 609 210 HOH HOH . M 4 HOH A 210 610 211 HOH HOH . M 4 HOH A 211 611 212 HOH HOH . M 4 HOH A 212 612 213 HOH HOH . M 4 HOH A 213 613 214 HOH HOH . M 4 HOH A 214 614 215 HOH HOH . M 4 HOH A 215 615 216 HOH HOH . M 4 HOH A 216 616 217 HOH HOH . M 4 HOH A 217 617 218 HOH HOH . M 4 HOH A 218 618 219 HOH HOH . M 4 HOH A 219 619 220 HOH HOH . M 4 HOH A 220 620 221 HOH HOH . M 4 HOH A 221 621 222 HOH HOH . M 4 HOH A 222 622 223 HOH HOH . M 4 HOH A 223 623 224 HOH HOH . M 4 HOH A 224 624 226 HOH HOH . M 4 HOH A 225 625 227 HOH HOH . M 4 HOH A 226 626 228 HOH HOH . M 4 HOH A 227 627 229 HOH HOH . M 4 HOH A 228 628 230 HOH HOH . M 4 HOH A 229 629 231 HOH HOH . M 4 HOH A 230 630 232 HOH HOH . M 4 HOH A 231 631 233 HOH HOH . M 4 HOH A 232 632 234 HOH HOH . M 4 HOH A 233 633 235 HOH HOH . M 4 HOH A 234 634 236 HOH HOH . M 4 HOH A 235 635 237 HOH HOH . M 4 HOH A 236 636 238 HOH HOH . M 4 HOH A 237 637 239 HOH HOH . M 4 HOH A 238 638 240 HOH HOH . M 4 HOH A 239 639 241 HOH HOH . M 4 HOH A 240 640 242 HOH HOH . M 4 HOH A 241 641 243 HOH HOH . M 4 HOH A 242 642 244 HOH HOH . M 4 HOH A 243 643 245 HOH HOH . M 4 HOH A 244 644 246 HOH HOH . M 4 HOH A 245 645 247 HOH HOH . M 4 HOH A 246 646 248 HOH HOH . M 4 HOH A 247 647 249 HOH HOH . M 4 HOH A 248 648 251 HOH HOH . M 4 HOH A 249 649 252 HOH HOH . M 4 HOH A 250 650 253 HOH HOH . M 4 HOH A 251 651 254 HOH HOH . M 4 HOH A 252 652 255 HOH HOH . M 4 HOH A 253 653 256 HOH HOH . M 4 HOH A 254 654 257 HOH HOH . M 4 HOH A 255 655 258 HOH HOH . M 4 HOH A 256 656 259 HOH HOH . M 4 HOH A 257 657 261 HOH HOH . M 4 HOH A 258 658 262 HOH HOH . M 4 HOH A 259 659 263 HOH HOH . M 4 HOH A 260 660 264 HOH HOH . M 4 HOH A 261 661 265 HOH HOH . M 4 HOH A 262 662 266 HOH HOH . M 4 HOH A 263 663 267 HOH HOH . M 4 HOH A 264 664 268 HOH HOH . M 4 HOH A 265 665 269 HOH HOH . M 4 HOH A 266 666 270 HOH HOH . M 4 HOH A 267 667 272 HOH HOH . M 4 HOH A 268 668 273 HOH HOH . M 4 HOH A 269 669 274 HOH HOH . M 4 HOH A 270 670 275 HOH HOH . M 4 HOH A 271 671 276 HOH HOH . M 4 HOH A 272 672 277 HOH HOH . M 4 HOH A 273 673 278 HOH HOH . M 4 HOH A 274 674 279 HOH HOH . M 4 HOH A 275 675 280 HOH HOH . M 4 HOH A 276 676 282 HOH HOH . M 4 HOH A 277 677 283 HOH HOH . M 4 HOH A 278 678 284 HOH HOH . M 4 HOH A 279 679 285 HOH HOH . M 4 HOH A 280 680 286 HOH HOH . M 4 HOH A 281 681 287 HOH HOH . M 4 HOH A 282 682 288 HOH HOH . M 4 HOH A 283 683 291 HOH HOH . M 4 HOH A 284 684 293 HOH HOH . M 4 HOH A 285 685 294 HOH HOH . M 4 HOH A 286 686 295 HOH HOH . M 4 HOH A 287 687 296 HOH HOH . M 4 HOH A 288 688 297 HOH HOH . M 4 HOH A 289 689 298 HOH HOH . M 4 HOH A 290 690 299 HOH HOH . M 4 HOH A 291 691 300 HOH HOH . M 4 HOH A 292 692 301 HOH HOH . M 4 HOH A 293 693 302 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 3 29.666 -13.803 0.512 1 45.86 ? C1 EDO 309 A 1 HETATM 2 O O1 EDO . . . J 3 28.847 -14.965 0.726 1 45.79 ? O1 EDO 309 A 1 HETATM 3 C C2 EDO . . . J 3 31.113 -14.081 0.91 1 46.03 ? C2 EDO 309 A 1 HETATM 4 O O2 EDO . . . J 3 31.169 -15.238 1.756 1 46.4 ? O2 EDO 309 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #