data_4E7Y # _model_server_result.job_id mChfJr4r39QQZcKWJkXFmg _model_server_result.datetime_utc '2025-03-03 00:37:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 4E7Y # _exptl.entry_id 4E7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E7Y _cell.length_a 47.72 _cell.length_b 47.72 _cell.length_c 34.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 17.33 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N7 DG 3 A DG 3 1_555 C BA BA . A BA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc2 A O6 DG 4 A DG 4 1_555 C BA BA . A BA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc3 C BA BA . A BA 102 1_555 D O HOH . A HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc4 C BA BA . A BA 102 1_555 D O HOH . A HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? metalc ? metalc5 C BA BA . A BA 102 1_555 D O HOH . A HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.081 ? metalc ? metalc6 C BA BA . A BA 102 1_555 D O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc7 C BA BA . A BA 102 1_555 D O HOH . A HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc8 C BA BA . A BA 102 1_555 D O HOH . A HOH 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? hydrog 'DC-DG PAIR' hydrog1 A N4 DC 1 A DC 1 1_555 A O6 DG 10 A DG 10 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N3 DC 2 A DC 2 1_555 A N1 DG 9 A DG 9 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N4 DC 2 A DC 2 1_555 A O6 DG 9 A DG 9 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O2 DC 2 A DC 2 1_555 A N2 DG 9 A DG 9 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N1 DG 3 A DG 3 1_555 A N3 DC 8 A DC 8 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N2 DG 3 A DG 3 1_555 A O2 DC 8 A DC 8 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O6 DG 3 A DG 3 1_555 A N4 DC 8 A DC 8 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N1 DG 4 A DG 4 1_555 A N3 DC 7 A DC 7 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N2 DG 4 A DG 4 1_555 A O2 DC 7 A DC 7 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O6 DG 4 A DG 4 1_555 A N4 DC 7 A DC 7 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N1 DA 5 A DA 5 1_555 A N3 DT 6 A DT 6 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N6 DA 5 A DA 5 1_555 A O4 DT 6 A DT 6 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DT 6 A DT 6 1_555 A N1 DA 5 A DA 5 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O4 DT 6 A DT 6 1_555 A N6 DA 5 A DA 5 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N3 DC 7 A DC 7 1_555 A N1 DG 4 A DG 4 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N4 DC 7 A DC 7 1_555 A O6 DG 4 A DG 4 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O2 DC 7 A DC 7 1_555 A N2 DG 4 A DG 4 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N3 DC 8 A DC 8 1_555 A N1 DG 3 A DG 3 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N4 DC 8 A DC 8 1_555 A O6 DG 3 A DG 3 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O2 DC 8 A DC 8 1_555 A N2 DG 3 A DG 3 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 9 A DG 9 1_555 A N3 DC 2 A DC 2 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 9 A DG 9 1_555 A O2 DC 2 A DC 2 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 9 A DG 9 1_555 A N4 DC 2 A DC 2 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog24 A O6 DG 10 A DG 10 1_555 A N4 DC 1 A DC 1 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4E7Y _atom_sites.fract_transf_matrix[1][1] 0.020956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020956 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028852 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RKP A 1 101 1 RKP RKP . C 3 BA A 1 102 1 BA BA . D 4 HOH A 1 201 1 HOH HOH . D 4 HOH A 2 202 2 HOH HOH . D 4 HOH A 3 203 3 HOH HOH . D 4 HOH A 4 204 4 HOH HOH . D 4 HOH A 5 205 5 HOH HOH . D 4 HOH A 6 206 6 HOH HOH . D 4 HOH A 7 207 7 HOH HOH . D 4 HOH A 8 208 8 HOH HOH . D 4 HOH A 9 209 9 HOH HOH . D 4 HOH A 10 210 10 HOH HOH . D 4 HOH A 11 211 11 HOH HOH . D 4 HOH A 12 212 12 HOH HOH . D 4 HOH A 13 213 13 HOH HOH . D 4 HOH A 14 214 14 HOH HOH . D 4 HOH A 15 215 15 HOH HOH . D 4 HOH A 16 216 17 HOH HOH . D 4 HOH A 17 217 18 HOH HOH . D 4 HOH A 18 218 19 HOH HOH . D 4 HOH A 19 219 20 HOH HOH . D 4 HOH A 20 220 21 HOH HOH . D 4 HOH A 21 221 22 HOH HOH . D 4 HOH A 22 222 23 HOH HOH . D 4 HOH A 23 223 24 HOH HOH . D 4 HOH A 24 224 25 HOH HOH . D 4 HOH A 25 225 26 HOH HOH . D 4 HOH A 26 226 27 HOH HOH . D 4 HOH A 27 227 28 HOH HOH . D 4 HOH A 28 228 29 HOH HOH . D 4 HOH A 29 229 30 HOH HOH . D 4 HOH A 30 230 31 HOH HOH . D 4 HOH A 31 231 32 HOH HOH . D 4 HOH A 32 232 33 HOH HOH . D 4 HOH A 33 233 34 HOH HOH . D 4 HOH A 34 234 35 HOH HOH . D 4 HOH A 35 235 36 HOH HOH . D 4 HOH A 36 236 37 HOH HOH . D 4 HOH A 37 237 38 HOH HOH . D 4 HOH A 38 238 39 HOH HOH . D 4 HOH A 39 239 40 HOH HOH . D 4 HOH A 40 240 41 HOH HOH . D 4 HOH A 41 241 42 HOH HOH . D 4 HOH A 42 242 43 HOH HOH . D 4 HOH A 43 243 44 HOH HOH . D 4 HOH A 44 244 45 HOH HOH . D 4 HOH A 45 245 46 HOH HOH . D 4 HOH A 46 246 47 HOH HOH . D 4 HOH A 47 247 48 HOH HOH . D 4 HOH A 48 248 49 HOH HOH . D 4 HOH A 49 249 50 HOH HOH . D 4 HOH A 50 250 51 HOH HOH . D 4 HOH A 51 251 52 HOH HOH . D 4 HOH A 52 252 53 HOH HOH . D 4 HOH A 53 253 54 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -11.995 _atom_site.Cartn_y 7.822 _atom_site.Cartn_z 11.501 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #