data_4E92 # _model_server_result.job_id Nj_DJvqY7S5FUON-X5P4HA _model_server_result.datetime_utc '2025-09-05 00:50:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4e92 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4E92 # _exptl.entry_id 4E92 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 522.985 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{2-[5-(3-chlorophenyl)-1H-pyrazol-4-yl]-1-[3-(1H-imidazol-1-yl)propyl]-1H-benzimidazol-5-yl}benzoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4E92 _cell.length_a 81.709 _cell.length_b 81.709 _cell.length_c 90.15 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4E92 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C29 H23 Cl N6 O2' _chem_comp.formula_weight 522.985 _chem_comp.id 0OE _chem_comp.mon_nstd_flag . _chem_comp.name '4-{2-[5-(3-chlorophenyl)-1H-pyrazol-4-yl]-1-[3-(1H-imidazol-1-yl)propyl]-1H-benzimidazol-5-yl}benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C8 0OE sing 1 n n C9 C8 0OE doub 2 n y C9 C10 0OE sing 3 n y C8 C7 0OE sing 4 n y C10 C11 0OE doub 5 n y C7 C6 0OE doub 6 n y C11 C6 0OE sing 7 n y C6 C5 0OE sing 8 n n O29 C27 0OE doub 9 n n C25 C26 0OE doub 10 n y C25 C24 0OE sing 11 n y C26 C21 0OE sing 12 n y C27 C24 0OE sing 13 n n C27 O28 0OE sing 14 n n C24 C23 0OE doub 15 n y C5 N1 0OE sing 16 n y C5 C4 0OE doub 17 n y C21 C19 0OE sing 18 n n C21 C22 0OE doub 19 n y N1 N2 0OE sing 20 n y C20 C19 0OE doub 21 n y C20 C15 0OE sing 22 n y C19 C18 0OE sing 23 n y C15 N16 0OE sing 24 n y C15 C14 0OE doub 25 n y C18 C17 0OE doub 26 n y N16 C12 0OE doub 27 n y C23 C22 0OE sing 28 n y C14 C17 0OE sing 29 n y C14 N13 0OE sing 30 n y C12 N13 0OE sing 31 n y C12 C4 0OE sing 32 n n N13 C31 0OE sing 33 n n C4 C3 0OE sing 34 n y C31 C32 0OE sing 35 n n N2 C3 0OE doub 36 n y N36 C35 0OE doub 37 n y N36 C37 0OE sing 38 n y C35 N34 0OE sing 39 n y C32 C33 0OE sing 40 n n N34 C33 0OE sing 41 n n N34 C38 0OE sing 42 n y C37 C38 0OE doub 43 n y N1 H1 0OE sing 44 n n C3 H2 0OE sing 45 n n C7 H3 0OE sing 46 n n C9 H4 0OE sing 47 n n C10 H5 0OE sing 48 n n C11 H6 0OE sing 49 n n C17 H7 0OE sing 50 n n C18 H8 0OE sing 51 n n C20 H9 0OE sing 52 n n C22 H10 0OE sing 53 n n C23 H11 0OE sing 54 n n C25 H12 0OE sing 55 n n C26 H13 0OE sing 56 n n O28 H14 0OE sing 57 n n C31 H15 0OE sing 58 n n C31 H16 0OE sing 59 n n C32 H17 0OE sing 60 n n C32 H18 0OE sing 61 n n C33 H19 0OE sing 62 n n C33 H20 0OE sing 63 n n C35 H21 0OE sing 64 n n C37 H22 0OE sing 65 n n C38 H23 0OE sing 66 n n # _atom_sites.entry_id 4E92 _atom_sites.fract_transf_matrix[1][1] 0.012239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0OE A 1 201 1 0OE IN1 . D 3 0OG A 1 202 3 0OG IN2 . E 2 0OE B 1 201 2 0OE IN1 . F 3 0OG B 1 202 4 0OG IN2 . G 4 HOH A 1 301 2 HOH HOH . G 4 HOH A 2 302 4 HOH HOH . G 4 HOH A 3 303 5 HOH HOH . G 4 HOH A 4 304 6 HOH HOH . G 4 HOH A 5 305 7 HOH HOH . G 4 HOH A 6 306 8 HOH HOH . G 4 HOH A 7 307 10 HOH HOH . G 4 HOH A 8 308 11 HOH HOH . G 4 HOH A 9 309 13 HOH HOH . G 4 HOH A 10 310 15 HOH HOH . G 4 HOH A 11 311 16 HOH HOH . G 4 HOH A 12 312 17 HOH HOH . G 4 HOH A 13 313 21 HOH HOH . G 4 HOH A 14 314 22 HOH HOH . G 4 HOH A 15 315 23 HOH HOH . G 4 HOH A 16 316 24 HOH HOH . G 4 HOH A 17 317 25 HOH HOH . G 4 HOH A 18 318 26 HOH HOH . G 4 HOH A 19 319 27 HOH HOH . G 4 HOH A 20 320 28 HOH HOH . G 4 HOH A 21 321 29 HOH HOH . G 4 HOH A 22 322 30 HOH HOH . G 4 HOH A 23 323 31 HOH HOH . G 4 HOH A 24 324 32 HOH HOH . G 4 HOH A 25 325 33 HOH HOH . G 4 HOH A 26 326 34 HOH HOH . G 4 HOH A 27 327 36 HOH HOH . G 4 HOH A 28 328 38 HOH HOH . G 4 HOH A 29 329 40 HOH HOH . G 4 HOH A 30 330 41 HOH HOH . G 4 HOH A 31 331 42 HOH HOH . G 4 HOH A 32 332 43 HOH HOH . G 4 HOH A 33 333 45 HOH HOH . G 4 HOH A 34 334 46 HOH HOH . G 4 HOH A 35 335 48 HOH HOH . G 4 HOH A 36 336 51 HOH HOH . G 4 HOH A 37 337 55 HOH HOH . G 4 HOH A 38 338 56 HOH HOH . G 4 HOH A 39 339 57 HOH HOH . G 4 HOH A 40 340 58 HOH HOH . G 4 HOH A 41 341 59 HOH HOH . G 4 HOH A 42 342 60 HOH HOH . G 4 HOH A 43 343 61 HOH HOH . G 4 HOH A 44 344 62 HOH HOH . G 4 HOH A 45 345 63 HOH HOH . G 4 HOH A 46 346 64 HOH HOH . G 4 HOH A 47 347 66 HOH HOH . G 4 HOH A 48 348 67 HOH HOH . G 4 HOH A 49 349 68 HOH HOH . G 4 HOH A 50 350 69 HOH HOH . G 4 HOH A 51 351 70 HOH HOH . G 4 HOH A 52 352 72 HOH HOH . G 4 HOH A 53 353 75 HOH HOH . G 4 HOH A 54 354 76 HOH HOH . G 4 HOH A 55 355 79 HOH HOH . G 4 HOH A 56 356 80 HOH HOH . G 4 HOH A 57 357 82 HOH HOH . G 4 HOH A 58 358 84 HOH HOH . G 4 HOH A 59 359 85 HOH HOH . G 4 HOH A 60 360 89 HOH HOH . G 4 HOH A 61 361 93 HOH HOH . G 4 HOH A 62 362 96 HOH HOH . G 4 HOH A 63 363 98 HOH HOH . G 4 HOH A 64 364 99 HOH HOH . G 4 HOH A 65 365 100 HOH HOH . G 4 HOH A 66 366 101 HOH HOH . G 4 HOH A 67 367 103 HOH HOH . G 4 HOH A 68 368 104 HOH HOH . G 4 HOH A 69 369 105 HOH HOH . G 4 HOH A 70 370 106 HOH HOH . G 4 HOH A 71 371 108 HOH HOH . G 4 HOH A 72 372 110 HOH HOH . G 4 HOH A 73 373 111 HOH HOH . G 4 HOH A 74 374 112 HOH HOH . G 4 HOH A 75 375 113 HOH HOH . G 4 HOH A 76 376 119 HOH HOH . G 4 HOH A 77 377 120 HOH HOH . G 4 HOH A 78 378 121 HOH HOH . G 4 HOH A 79 379 122 HOH HOH . G 4 HOH A 80 380 123 HOH HOH . G 4 HOH A 81 381 124 HOH HOH . G 4 HOH A 82 382 126 HOH HOH . G 4 HOH A 83 383 128 HOH HOH . G 4 HOH A 84 384 129 HOH HOH . G 4 HOH A 85 385 130 HOH HOH . G 4 HOH A 86 386 131 HOH HOH . G 4 HOH A 87 387 132 HOH HOH . G 4 HOH A 88 388 133 HOH HOH . G 4 HOH A 89 389 134 HOH HOH . G 4 HOH A 90 390 135 HOH HOH . G 4 HOH A 91 391 138 HOH HOH . G 4 HOH A 92 392 142 HOH HOH . G 4 HOH A 93 393 143 HOH HOH . G 4 HOH A 94 394 144 HOH HOH . G 4 HOH A 95 395 145 HOH HOH . G 4 HOH A 96 396 148 HOH HOH . G 4 HOH A 97 397 149 HOH HOH . G 4 HOH A 98 398 150 HOH HOH . G 4 HOH A 99 399 151 HOH HOH . G 4 HOH A 100 400 153 HOH HOH . G 4 HOH A 101 401 155 HOH HOH . G 4 HOH A 102 402 156 HOH HOH . G 4 HOH A 103 403 157 HOH HOH . G 4 HOH A 104 404 158 HOH HOH . G 4 HOH A 105 405 159 HOH HOH . G 4 HOH A 106 406 161 HOH HOH . G 4 HOH A 107 407 162 HOH HOH . H 4 HOH B 1 301 1 HOH HOH . H 4 HOH B 2 302 3 HOH HOH . H 4 HOH B 3 303 9 HOH HOH . H 4 HOH B 4 304 12 HOH HOH . H 4 HOH B 5 305 14 HOH HOH . H 4 HOH B 6 306 18 HOH HOH . H 4 HOH B 7 307 19 HOH HOH . H 4 HOH B 8 308 20 HOH HOH . H 4 HOH B 9 309 35 HOH HOH . H 4 HOH B 10 310 37 HOH HOH . H 4 HOH B 11 311 39 HOH HOH . H 4 HOH B 12 312 44 HOH HOH . H 4 HOH B 13 313 47 HOH HOH . H 4 HOH B 14 314 49 HOH HOH . H 4 HOH B 15 315 50 HOH HOH . H 4 HOH B 16 316 52 HOH HOH . H 4 HOH B 17 317 53 HOH HOH . H 4 HOH B 18 318 54 HOH HOH . H 4 HOH B 19 319 65 HOH HOH . H 4 HOH B 20 320 71 HOH HOH . H 4 HOH B 21 321 73 HOH HOH . H 4 HOH B 22 322 74 HOH HOH . H 4 HOH B 23 323 77 HOH HOH . H 4 HOH B 24 324 78 HOH HOH . H 4 HOH B 25 325 81 HOH HOH . H 4 HOH B 26 326 83 HOH HOH . H 4 HOH B 27 327 86 HOH HOH . H 4 HOH B 28 328 87 HOH HOH . H 4 HOH B 29 329 88 HOH HOH . H 4 HOH B 30 330 90 HOH HOH . H 4 HOH B 31 331 91 HOH HOH . H 4 HOH B 32 332 92 HOH HOH . H 4 HOH B 33 333 94 HOH HOH . H 4 HOH B 34 334 95 HOH HOH . H 4 HOH B 35 335 97 HOH HOH . H 4 HOH B 36 336 102 HOH HOH . H 4 HOH B 37 337 107 HOH HOH . H 4 HOH B 38 338 109 HOH HOH . H 4 HOH B 39 339 114 HOH HOH . H 4 HOH B 40 340 115 HOH HOH . H 4 HOH B 41 341 116 HOH HOH . H 4 HOH B 42 342 117 HOH HOH . H 4 HOH B 43 343 118 HOH HOH . H 4 HOH B 44 344 125 HOH HOH . H 4 HOH B 45 345 127 HOH HOH . H 4 HOH B 46 346 136 HOH HOH . H 4 HOH B 47 347 137 HOH HOH . H 4 HOH B 48 348 139 HOH HOH . H 4 HOH B 49 349 140 HOH HOH . H 4 HOH B 50 350 141 HOH HOH . H 4 HOH B 51 351 146 HOH HOH . H 4 HOH B 52 352 147 HOH HOH . H 4 HOH B 53 353 152 HOH HOH . H 4 HOH B 54 354 154 HOH HOH . H 4 HOH B 55 355 160 HOH HOH . H 4 HOH B 56 356 163 HOH HOH . H 4 HOH B 57 357 164 HOH HOH . H 4 HOH B 58 358 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0OE . . . E 2 43.446 17.477 22.993 1 43.32 ? N1 0OE 201 B 1 HETATM 2 N N2 0OE . . . E 2 43.584 18.805 22.929 1 42.59 ? N2 0OE 201 B 1 HETATM 3 C C3 0OE . . . E 2 42.697 19.42 22.051 1 41.38 ? C3 0OE 201 B 1 HETATM 4 C C4 0OE . . . E 2 41.942 18.396 21.518 1 38.34 ? C4 0OE 201 B 1 HETATM 5 C C5 0OE . . . E 2 42.423 17.18 22.129 1 45.8 ? C5 0OE 201 B 1 HETATM 6 C C6 0OE . . . E 2 41.939 15.773 21.882 1 49.07 ? C6 0OE 201 B 1 HETATM 7 C C7 0OE . . . E 2 40.594 15.415 21.999 1 44.66 ? C7 0OE 201 B 1 HETATM 8 C C8 0OE . . . E 2 40.209 14.094 21.76 1 51.74 ? C8 0OE 201 B 1 HETATM 9 C C9 0OE . . . E 2 41.145 13.133 21.416 1 51 ? C9 0OE 201 B 1 HETATM 10 C C10 0OE . . . E 2 42.482 13.485 21.305 1 50.42 ? C10 0OE 201 B 1 HETATM 11 C C11 0OE . . . E 2 42.873 14.797 21.538 1 54.77 ? C11 0OE 201 B 1 HETATM 12 C C12 0OE . . . E 2 40.824 18.568 20.503 1 33.96 ? C12 0OE 201 B 1 HETATM 13 N N13 0OE . . . E 2 40.831 18.1 19.18 1 32.21 ? N13 0OE 201 B 1 HETATM 14 C C14 0OE . . . E 2 39.6 18.48 18.581 1 30.7 ? C14 0OE 201 B 1 HETATM 15 C C15 0OE . . . E 2 38.925 19.168 19.602 1 27.65 ? C15 0OE 201 B 1 HETATM 16 N N16 0OE . . . E 2 39.683 19.215 20.779 1 30.12 ? N16 0OE 201 B 1 HETATM 17 C C17 0OE . . . E 2 39.054 18.299 17.321 1 28.85 ? C17 0OE 201 B 1 HETATM 18 C C18 0OE . . . E 2 37.773 18.835 17.101 1 25.23 ? C18 0OE 201 B 1 HETATM 19 C C19 0OE . . . E 2 37.077 19.538 18.101 1 24.16 ? C19 0OE 201 B 1 HETATM 20 C C20 0OE . . . E 2 37.657 19.696 19.363 1 23.21 ? C20 0OE 201 B 1 HETATM 21 C C21 0OE . . . E 2 35.685 20.083 17.823 1 21.15 ? C21 0OE 201 B 1 HETATM 22 C C22 0OE . . . E 2 35.33 20.516 16.556 1 25.47 ? C22 0OE 201 B 1 HETATM 23 C C23 0OE . . . E 2 34.042 20.996 16.31 1 23.12 ? C23 0OE 201 B 1 HETATM 24 C C24 0OE . . . E 2 33.095 21.048 17.331 1 21.12 ? C24 0OE 201 B 1 HETATM 25 C C25 0OE . . . E 2 33.449 20.61 18.6 1 19.47 ? C25 0OE 201 B 1 HETATM 26 C C26 0OE . . . E 2 34.733 20.128 18.845 1 20.33 ? C26 0OE 201 B 1 HETATM 27 C C27 0OE . . . E 2 31.714 21.552 17.06 1 26.13 ? C27 0OE 201 B 1 HETATM 28 O O28 0OE . . . E 2 31.411 21.964 15.915 1 25.78 ? O28 0OE 201 B 1 HETATM 29 O O29 0OE . . . E 2 30.852 21.536 17.977 1 22.61 ? O29 0OE 201 B 1 HETATM 30 CL CL 0OE . . . E 2 38.545 13.624 21.89 1 38.97 ? CL 0OE 201 B 1 HETATM 31 C C31 0OE . . . E 2 41.902 17.352 18.506 1 45.08 ? C31 0OE 201 B 1 HETATM 32 C C32 0OE . . . E 2 42.636 18.286 17.582 1 49.65 ? C32 0OE 201 B 1 HETATM 33 C C33 0OE . . . E 2 43.81 17.582 16.973 1 66.24 ? C33 0OE 201 B 1 HETATM 34 N N34 0OE . . . E 2 44.725 17.175 18.019 1 69.89 ? N34 0OE 201 B 1 HETATM 35 C C35 0OE . . . E 2 45.577 18.017 18.737 1 75.13 ? C35 0OE 201 B 1 HETATM 36 N N36 0OE . . . E 2 46.303 17.328 19.646 1 77.68 ? N36 0OE 201 B 1 HETATM 37 C C37 0OE . . . E 2 45.904 16.003 19.503 1 70.43 ? C37 0OE 201 B 1 HETATM 38 C C38 0OE . . . E 2 44.918 15.875 18.495 1 69.05 ? C38 0OE 201 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #