data_4EA3 # _model_server_result.job_id GR1NgEPqcLsJPnAQmNTpCw _model_server_result.datetime_utc '2024-11-26 08:24:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ea3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1502}' # _entry.id 4EA3 # _exptl.entry_id 4EA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.14 _cell.angle_gamma 90 _cell.entry_id 4EA3 _cell.length_a 42.106 _cell.length_b 170.939 _cell.length_c 65.353 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 1 2 A,C,D,E,H 2 1 B,F,G,I 2 3 A,B,C,D,E,F,G,H,I 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 14.856777 0 -63.641895 3 'crystal symmetry operation' 1_454 x-1,y,z-1 1 0 0 0 1 0 0 0 1 -27.249223 0 -63.641895 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 123 1_555 A SG CYS 274 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 197 B CYS 123 1_555 B SG CYS 274 B CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLB _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O19 OLB doub 361 n n C1 O20 OLB sing 362 n n C2 C1 OLB sing 363 n n C3 C2 OLB sing 364 n n C4 C3 OLB sing 365 n n C5 C4 OLB sing 366 n n C5 C6 OLB sing 367 n n O20 C21 OLB sing 368 n n C21 C22 OLB sing 369 n n C22 C24 OLB sing 370 n n O23 C22 OLB sing 371 n n C24 O25 OLB sing 372 n n C6 C7 OLB sing 373 n n C7 C8 OLB sing 374 n n C8 C9 OLB sing 375 n n C9 C10 OLB doub 376 z n C10 C11 OLB sing 377 n n C2 H2 OLB sing 378 n n C2 H2A OLB sing 379 n n C3 H3 OLB sing 380 n n C3 H3A OLB sing 381 n n C4 H4 OLB sing 382 n n C4 H4A OLB sing 383 n n C5 H5 OLB sing 384 n n C5 H5A OLB sing 385 n n C21 H21 OLB sing 386 n n C21 H21A OLB sing 387 n n C22 H22 OLB sing 388 n n O23 HO23 OLB sing 389 n n C24 H24 OLB sing 390 n n C24 H24A OLB sing 391 n n O25 HO25 OLB sing 392 n n C6 H16 OLB sing 393 n n C6 H17 OLB sing 394 n n C7 H18 OLB sing 395 n n C7 H19 OLB sing 396 n n C8 H20 OLB sing 397 n n C8 H211 OLB sing 398 n n C9 H221 OLB sing 399 n n C10 H23 OLB sing 400 n n C11 H241 OLB sing 401 n n C11 H25 OLB sing 402 n n C11 C12 OLB sing 403 n n C12 H26 OLB sing 404 n n C12 C13 OLB sing 405 n n C12 H27 OLB sing 406 n n C13 C14 OLB sing 407 n n C13 H28 OLB sing 408 n n C13 H29 OLB sing 409 n n C14 H30 OLB sing 410 n n C14 H31 OLB sing 411 n n C14 C15 OLB sing 412 n n C15 C16 OLB sing 413 n n C15 H32 OLB sing 414 n n C15 H33 OLB sing 415 n n C16 H34 OLB sing 416 n n C16 H35 OLB sing 417 n n C16 C17 OLB sing 418 n n C17 C18 OLB sing 419 n n C17 H36 OLB sing 420 n n C17 H37 OLB sing 421 n n C18 H38 OLB sing 422 n n C18 H39 OLB sing 423 n n C18 H40 OLB sing 424 n n # _atom_sites.entry_id 4EA3 _atom_sites.fract_transf_matrix[1][1] 0.02375 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005544 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00585 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0NN A 1 1501 500 0NN 0NN . D 3 OLB A 1 1502 501 OLB OLB . E 4 OLA A 1 1503 502 OLA OLA . F 2 0NN B 1 1501 500 0NN 0NN . G 5 OLC B 1 1502 501 OLC OLC . H 6 HOH A 1 1601 503 HOH HOH . H 6 HOH A 2 1602 504 HOH HOH . H 6 HOH A 3 1603 505 HOH HOH . H 6 HOH A 4 1604 506 HOH HOH . H 6 HOH A 5 1605 507 HOH HOH . H 6 HOH A 6 1606 508 HOH HOH . I 6 HOH B 1 1601 502 HOH HOH . I 6 HOH B 2 1602 503 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLB . . . D 3 -0.041 -34.922 -11.88 1 93.74 ? C1 OLB 1502 A 1 HETATM 2 C C2 OLB . . . D 3 0.721 -36.187 -11.552 1 92.92 ? C2 OLB 1502 A 1 HETATM 3 C C3 OLB . . . D 3 0.29 -37.328 -12.468 1 90.17 ? C3 OLB 1502 A 1 HETATM 4 C C4 OLB . . . D 3 -0.771 -38.213 -11.819 1 86.67 ? C4 OLB 1502 A 1 HETATM 5 C C5 OLB . . . D 3 -0.162 -39.249 -10.877 1 83.83 ? C5 OLB 1502 A 1 HETATM 6 O O19 OLB . . . D 3 -1.09 -34.97 -12.502 1 91.96 ? O19 OLB 1502 A 1 HETATM 7 O O20 OLB . . . D 3 0.471 -33.627 -11.451 1 95.15 ? O20 OLB 1502 A 1 HETATM 8 C C21 OLB . . . D 3 -0.416 -32.517 -11.298 1 96.39 ? C21 OLB 1502 A 1 HETATM 9 C C22 OLB . . . D 3 0.38 -31.228 -11.111 1 96.17 ? C22 OLB 1502 A 1 HETATM 10 O O23 OLB . . . D 3 0.65 -30.637 -12.388 1 95.79 ? O23 OLB 1502 A 1 HETATM 11 C C24 OLB . . . D 3 -0.412 -30.233 -10.269 1 95.22 ? C24 OLB 1502 A 1 HETATM 12 O O25 OLB . . . D 3 -0.659 -30.781 -8.969 1 95.35 ? O25 OLB 1502 A 1 HETATM 13 C C6 OLB . . . D 3 0.883 -40.095 -11.596 1 82.72 ? C6 OLB 1502 A 1 HETATM 14 C C7 OLB . . . D 3 0.935 -41.513 -11.04 1 79.51 ? C7 OLB 1502 A 1 HETATM 15 C C8 OLB . . . D 3 1.882 -42.38 -11.862 1 76.37 ? C8 OLB 1502 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #