data_4EA3 # _model_server_result.job_id C7k3uWcWzKkwzScqXCq2qQ _model_server_result.datetime_utc '2024-11-29 19:21:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ea3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1502}' # _entry.id 4EA3 # _exptl.entry_id 4EA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.14 _cell.angle_gamma 90 _cell.entry_id 4EA3 _cell.length_a 42.106 _cell.length_b 170.939 _cell.length_c 65.353 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 1 2 A,C,D,E,H 2 1 B,F,G,I 2 3 A,B,C,D,E,F,G,H,I 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 14.856777 0 -63.641895 3 'crystal symmetry operation' 1_454 x-1,y,z-1 1 0 0 0 1 0 0 0 1 -27.249223 0 -63.641895 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 123 1_555 A SG CYS 274 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 197 B CYS 123 1_555 B SG CYS 274 B CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 425 n n C10 C9 OLC doub 426 n n C10 C11 OLC sing 427 n n C9 C8 OLC sing 428 n n C17 C16 OLC sing 429 z n C11 C12 OLC sing 430 n n C8 C7 OLC sing 431 n n C24 C22 OLC sing 432 n n C24 O25 OLC sing 433 n n C16 C15 OLC sing 434 n n C12 C13 OLC sing 435 n n C7 C6 OLC sing 436 n n C15 C14 OLC sing 437 n n C13 C14 OLC sing 438 n n C6 C5 OLC sing 439 n n C5 C4 OLC sing 440 n n C4 C3 OLC sing 441 n n C3 C2 OLC sing 442 n n C2 C1 OLC sing 443 n n C21 C22 OLC sing 444 n n C21 O20 OLC sing 445 n n C1 O19 OLC doub 446 n n C1 O20 OLC sing 447 n n C22 O23 OLC sing 448 n n C18 H18 OLC sing 449 n n C18 H18A OLC sing 450 n n C18 H18B OLC sing 451 n n C10 H10 OLC sing 452 n n C9 H9 OLC sing 453 n n C17 H17 OLC sing 454 n n C17 H17A OLC sing 455 n n C11 H11 OLC sing 456 n n C11 H11A OLC sing 457 n n C8 H8 OLC sing 458 n n C8 H8A OLC sing 459 n n C24 H24 OLC sing 460 n n C24 H24A OLC sing 461 n n C16 H16 OLC sing 462 n n C16 H16A OLC sing 463 n n C12 H12 OLC sing 464 n n C12 H12A OLC sing 465 n n C7 H7 OLC sing 466 n n C7 H7A OLC sing 467 n n C15 H15 OLC sing 468 n n C15 H15A OLC sing 469 n n C13 H13 OLC sing 470 n n C13 H13A OLC sing 471 n n C6 H6 OLC sing 472 n n C6 H6A OLC sing 473 n n C14 H14 OLC sing 474 n n C14 H14A OLC sing 475 n n C5 H5 OLC sing 476 n n C5 H5A OLC sing 477 n n C4 H4 OLC sing 478 n n C4 H4A OLC sing 479 n n C3 H3 OLC sing 480 n n C3 H3A OLC sing 481 n n C2 H2 OLC sing 482 n n C2 H2A OLC sing 483 n n C21 H21 OLC sing 484 n n C21 H21A OLC sing 485 n n C22 H22 OLC sing 486 n n O25 HO25 OLC sing 487 n n O23 HO23 OLC sing 488 n n # _atom_sites.entry_id 4EA3 _atom_sites.fract_transf_matrix[1][1] 0.02375 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005544 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00585 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0NN A 1 1501 500 0NN 0NN . D 3 OLB A 1 1502 501 OLB OLB . E 4 OLA A 1 1503 502 OLA OLA . F 2 0NN B 1 1501 500 0NN 0NN . G 5 OLC B 1 1502 501 OLC OLC . H 6 HOH A 1 1601 503 HOH HOH . H 6 HOH A 2 1602 504 HOH HOH . H 6 HOH A 3 1603 505 HOH HOH . H 6 HOH A 4 1604 506 HOH HOH . H 6 HOH A 5 1605 507 HOH HOH . H 6 HOH A 6 1606 508 HOH HOH . I 6 HOH B 1 1601 502 HOH HOH . I 6 HOH B 2 1602 503 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 OLC . . . G 5 8.047 -54.394 51.071 1 59.19 ? C9 OLC 1502 B 1 HETATM 2 C C8 OLC . . . G 5 7.287 -55.592 50.549 1 61.1 ? C8 OLC 1502 B 1 HETATM 3 C C24 OLC . . . G 5 4.49 -64.89 50.828 1 54.7 ? C24 OLC 1502 B 1 HETATM 4 C C7 OLC . . . G 5 5.79 -55.375 50.738 1 62.83 ? C7 OLC 1502 B 1 HETATM 5 C C6 OLC . . . G 5 5.077 -56.694 51.011 1 63.6 ? C6 OLC 1502 B 1 HETATM 6 C C5 OLC . . . G 5 5.155 -57.065 52.487 1 62.7 ? C5 OLC 1502 B 1 HETATM 7 C C4 OLC . . . G 5 4.695 -58.5 52.719 1 61.2 ? C4 OLC 1502 B 1 HETATM 8 C C3 OLC . . . G 5 5.859 -59.475 52.584 1 60.11 ? C3 OLC 1502 B 1 HETATM 9 C C2 OLC . . . G 5 5.423 -60.894 52.929 1 60.11 ? C2 OLC 1502 B 1 HETATM 10 C C21 OLC . . . G 5 6.792 -64.239 51.533 1 53.53 ? C21 OLC 1502 B 1 HETATM 11 C C1 OLC . . . G 5 6.304 -61.888 52.21 1 59.78 ? C1 OLC 1502 B 1 HETATM 12 C C22 OLC . . . G 5 5.908 -65.392 51.076 1 51.16 ? C22 OLC 1502 B 1 HETATM 13 O O19 OLC . . . G 5 7.26 -61.511 51.55 1 62.15 ? O19 OLC 1502 B 1 HETATM 14 O O25 OLC . . . G 5 3.675 -65.964 50.34 1 55.15 ? O25 OLC 1502 B 1 HETATM 15 O O23 OLC . . . G 5 6.436 -65.958 49.872 1 48.9 ? O23 OLC 1502 B 1 HETATM 16 O O20 OLC . . . G 5 6.019 -63.312 52.294 1 57.42 ? O20 OLC 1502 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 16 #