data_4EAB # _model_server_result.job_id wdFJRj1M-ChbbDMtH0qQKA _model_server_result.datetime_utc '2024-10-12 07:30:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4EAB # _exptl.entry_id 4EAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EAB _cell.length_a 114.968 _cell.length_b 114.968 _cell.length_c 114.968 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 3 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D NA NA . A NA 303 1_555 F O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc2 D NA NA . A NA 303 1_555 F O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EAB _atom_sites.fract_transf_matrix[1][1] 0.008698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JB2 A 1 301 1 JB2 JB2 . C 3 COA A 1 302 1 COA COA . D 4 NA A 1 303 1 NA NA . E 5 CL A 1 304 1 CL CL . F 6 HOH A 1 401 2 HOH HOH . F 6 HOH A 2 402 3 HOH HOH . F 6 HOH A 3 403 4 HOH HOH . F 6 HOH A 4 404 5 HOH HOH . F 6 HOH A 5 405 6 HOH HOH . F 6 HOH A 6 406 7 HOH HOH . F 6 HOH A 7 407 8 HOH HOH . F 6 HOH A 8 408 9 HOH HOH . F 6 HOH A 9 409 10 HOH HOH . F 6 HOH A 10 410 11 HOH HOH . F 6 HOH A 11 411 12 HOH HOH . F 6 HOH A 12 412 13 HOH HOH . F 6 HOH A 13 413 15 HOH HOH . F 6 HOH A 14 414 16 HOH HOH . F 6 HOH A 15 415 17 HOH HOH . F 6 HOH A 16 416 18 HOH HOH . F 6 HOH A 17 417 19 HOH HOH . F 6 HOH A 18 418 20 HOH HOH . F 6 HOH A 19 419 21 HOH HOH . F 6 HOH A 20 420 22 HOH HOH . F 6 HOH A 21 421 23 HOH HOH . F 6 HOH A 22 422 24 HOH HOH . F 6 HOH A 23 423 25 HOH HOH . F 6 HOH A 24 424 26 HOH HOH . F 6 HOH A 25 425 27 HOH HOH . F 6 HOH A 26 426 28 HOH HOH . F 6 HOH A 27 427 29 HOH HOH . F 6 HOH A 28 428 30 HOH HOH . F 6 HOH A 29 429 31 HOH HOH . F 6 HOH A 30 430 32 HOH HOH . F 6 HOH A 31 431 33 HOH HOH . F 6 HOH A 32 432 34 HOH HOH . F 6 HOH A 33 433 35 HOH HOH . F 6 HOH A 34 434 36 HOH HOH . F 6 HOH A 35 435 37 HOH HOH . F 6 HOH A 36 436 39 HOH HOH . F 6 HOH A 37 437 40 HOH HOH . F 6 HOH A 38 438 41 HOH HOH . F 6 HOH A 39 439 42 HOH HOH . F 6 HOH A 40 440 43 HOH HOH . F 6 HOH A 41 441 44 HOH HOH . F 6 HOH A 42 442 45 HOH HOH . F 6 HOH A 43 443 46 HOH HOH . F 6 HOH A 44 444 47 HOH HOH . F 6 HOH A 45 445 48 HOH HOH . F 6 HOH A 46 446 49 HOH HOH . F 6 HOH A 47 447 50 HOH HOH . F 6 HOH A 48 448 51 HOH HOH . F 6 HOH A 49 449 52 HOH HOH . F 6 HOH A 50 450 53 HOH HOH . F 6 HOH A 51 451 54 HOH HOH . F 6 HOH A 52 452 55 HOH HOH . F 6 HOH A 53 453 56 HOH HOH . F 6 HOH A 54 454 57 HOH HOH . F 6 HOH A 55 455 58 HOH HOH . F 6 HOH A 56 456 59 HOH HOH . F 6 HOH A 57 457 60 HOH HOH . F 6 HOH A 58 458 61 HOH HOH . F 6 HOH A 59 459 62 HOH HOH . F 6 HOH A 60 460 64 HOH HOH . F 6 HOH A 61 461 65 HOH HOH . F 6 HOH A 62 462 66 HOH HOH . F 6 HOH A 63 463 67 HOH HOH . F 6 HOH A 64 464 68 HOH HOH . F 6 HOH A 65 465 69 HOH HOH . F 6 HOH A 66 466 70 HOH HOH . F 6 HOH A 67 467 72 HOH HOH . F 6 HOH A 68 468 73 HOH HOH . F 6 HOH A 69 469 74 HOH HOH . F 6 HOH A 70 470 75 HOH HOH . F 6 HOH A 71 471 76 HOH HOH . F 6 HOH A 72 472 77 HOH HOH . F 6 HOH A 73 473 78 HOH HOH . F 6 HOH A 74 474 79 HOH HOH . F 6 HOH A 75 475 80 HOH HOH . F 6 HOH A 76 476 81 HOH HOH . F 6 HOH A 77 477 82 HOH HOH . F 6 HOH A 78 478 83 HOH HOH . F 6 HOH A 79 479 84 HOH HOH . F 6 HOH A 80 480 85 HOH HOH . F 6 HOH A 81 481 86 HOH HOH . F 6 HOH A 82 482 87 HOH HOH . F 6 HOH A 83 483 88 HOH HOH . F 6 HOH A 84 484 89 HOH HOH . F 6 HOH A 85 485 91 HOH HOH . F 6 HOH A 86 486 92 HOH HOH . F 6 HOH A 87 487 93 HOH HOH . F 6 HOH A 88 488 94 HOH HOH . F 6 HOH A 89 489 95 HOH HOH . F 6 HOH A 90 490 96 HOH HOH . F 6 HOH A 91 491 97 HOH HOH . F 6 HOH A 92 492 98 HOH HOH . F 6 HOH A 93 493 99 HOH HOH . F 6 HOH A 94 494 100 HOH HOH . F 6 HOH A 95 495 101 HOH HOH . F 6 HOH A 96 496 102 HOH HOH . F 6 HOH A 97 497 103 HOH HOH . F 6 HOH A 98 498 105 HOH HOH . F 6 HOH A 99 499 107 HOH HOH . F 6 HOH A 100 500 108 HOH HOH . F 6 HOH A 101 501 109 HOH HOH . F 6 HOH A 102 502 110 HOH HOH . F 6 HOH A 103 503 111 HOH HOH . F 6 HOH A 104 504 113 HOH HOH . F 6 HOH A 105 505 114 HOH HOH . F 6 HOH A 106 506 115 HOH HOH . F 6 HOH A 107 507 116 HOH HOH . F 6 HOH A 108 508 117 HOH HOH . F 6 HOH A 109 509 118 HOH HOH . F 6 HOH A 110 510 119 HOH HOH . F 6 HOH A 111 511 120 HOH HOH . F 6 HOH A 112 512 122 HOH HOH . F 6 HOH A 113 513 123 HOH HOH . F 6 HOH A 114 514 124 HOH HOH . F 6 HOH A 115 515 125 HOH HOH . F 6 HOH A 116 516 126 HOH HOH . F 6 HOH A 117 517 127 HOH HOH . F 6 HOH A 118 518 129 HOH HOH . F 6 HOH A 119 519 130 HOH HOH . F 6 HOH A 120 520 131 HOH HOH . F 6 HOH A 121 521 133 HOH HOH . F 6 HOH A 122 522 135 HOH HOH . F 6 HOH A 123 523 137 HOH HOH . F 6 HOH A 124 524 138 HOH HOH . F 6 HOH A 125 525 139 HOH HOH . F 6 HOH A 126 526 140 HOH HOH . F 6 HOH A 127 527 142 HOH HOH . F 6 HOH A 128 528 143 HOH HOH . F 6 HOH A 129 529 144 HOH HOH . F 6 HOH A 130 530 145 HOH HOH . F 6 HOH A 131 531 146 HOH HOH . F 6 HOH A 132 532 147 HOH HOH . F 6 HOH A 133 533 148 HOH HOH . F 6 HOH A 134 534 149 HOH HOH . F 6 HOH A 135 535 150 HOH HOH . F 6 HOH A 136 536 151 HOH HOH . F 6 HOH A 137 537 152 HOH HOH . F 6 HOH A 138 538 153 HOH HOH . F 6 HOH A 139 539 154 HOH HOH . F 6 HOH A 140 540 155 HOH HOH . F 6 HOH A 141 541 156 HOH HOH . F 6 HOH A 142 542 157 HOH HOH . F 6 HOH A 143 543 158 HOH HOH . F 6 HOH A 144 544 159 HOH HOH . F 6 HOH A 145 545 160 HOH HOH . F 6 HOH A 146 546 161 HOH HOH . F 6 HOH A 147 547 163 HOH HOH . F 6 HOH A 148 548 164 HOH HOH . F 6 HOH A 149 549 166 HOH HOH . F 6 HOH A 150 550 167 HOH HOH . F 6 HOH A 151 551 169 HOH HOH . F 6 HOH A 152 552 171 HOH HOH . F 6 HOH A 153 553 173 HOH HOH . F 6 HOH A 154 554 174 HOH HOH . F 6 HOH A 155 555 177 HOH HOH . F 6 HOH A 156 556 178 HOH HOH . F 6 HOH A 157 557 179 HOH HOH . F 6 HOH A 158 558 180 HOH HOH . F 6 HOH A 159 559 181 HOH HOH . F 6 HOH A 160 560 182 HOH HOH . F 6 HOH A 161 561 183 HOH HOH . F 6 HOH A 162 562 184 HOH HOH . F 6 HOH A 163 563 186 HOH HOH . F 6 HOH A 164 564 189 HOH HOH . F 6 HOH A 165 565 190 HOH HOH . F 6 HOH A 166 566 191 HOH HOH . F 6 HOH A 167 567 192 HOH HOH . F 6 HOH A 168 568 193 HOH HOH . F 6 HOH A 169 569 194 HOH HOH . F 6 HOH A 170 570 195 HOH HOH . F 6 HOH A 171 571 196 HOH HOH . F 6 HOH A 172 572 197 HOH HOH . F 6 HOH A 173 573 198 HOH HOH . F 6 HOH A 174 574 199 HOH HOH . F 6 HOH A 175 575 200 HOH HOH . F 6 HOH A 176 576 201 HOH HOH . F 6 HOH A 177 577 202 HOH HOH . F 6 HOH A 178 578 203 HOH HOH . F 6 HOH A 179 579 204 HOH HOH . F 6 HOH A 180 580 205 HOH HOH . F 6 HOH A 181 581 206 HOH HOH . F 6 HOH A 182 582 207 HOH HOH . F 6 HOH A 183 583 208 HOH HOH . F 6 HOH A 184 584 209 HOH HOH . F 6 HOH A 185 585 210 HOH HOH . F 6 HOH A 186 586 211 HOH HOH . F 6 HOH A 187 587 212 HOH HOH . F 6 HOH A 188 588 213 HOH HOH . F 6 HOH A 189 589 214 HOH HOH . F 6 HOH A 190 590 215 HOH HOH . F 6 HOH A 191 591 216 HOH HOH . F 6 HOH A 192 592 217 HOH HOH . F 6 HOH A 193 593 218 HOH HOH . F 6 HOH A 194 594 219 HOH HOH . F 6 HOH A 195 595 220 HOH HOH . F 6 HOH A 196 596 221 HOH HOH . F 6 HOH A 197 597 222 HOH HOH . F 6 HOH A 198 598 223 HOH HOH . F 6 HOH A 199 599 224 HOH HOH . F 6 HOH A 200 600 225 HOH HOH . F 6 HOH A 201 601 226 HOH HOH . F 6 HOH A 202 602 227 HOH HOH . F 6 HOH A 203 603 228 HOH HOH . F 6 HOH A 204 604 229 HOH HOH . F 6 HOH A 205 605 230 HOH HOH . F 6 HOH A 206 606 231 HOH HOH . F 6 HOH A 207 607 232 HOH HOH . F 6 HOH A 208 608 233 HOH HOH . F 6 HOH A 209 609 234 HOH HOH . F 6 HOH A 210 610 235 HOH HOH . F 6 HOH A 211 611 236 HOH HOH . F 6 HOH A 212 612 237 HOH HOH . F 6 HOH A 213 613 238 HOH HOH . F 6 HOH A 214 614 240 HOH HOH . F 6 HOH A 215 615 241 HOH HOH . F 6 HOH A 216 616 242 HOH HOH . F 6 HOH A 217 617 243 HOH HOH . F 6 HOH A 218 618 244 HOH HOH . F 6 HOH A 219 619 245 HOH HOH . F 6 HOH A 220 620 246 HOH HOH . F 6 HOH A 221 621 247 HOH HOH . F 6 HOH A 222 622 248 HOH HOH . F 6 HOH A 223 623 249 HOH HOH . F 6 HOH A 224 624 251 HOH HOH . F 6 HOH A 225 625 252 HOH HOH . F 6 HOH A 226 626 253 HOH HOH . F 6 HOH A 227 627 254 HOH HOH . F 6 HOH A 228 628 255 HOH HOH . F 6 HOH A 229 629 256 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 19.473 _atom_site.Cartn_y -19.479 _atom_site.Cartn_z 19.47 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 8.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #