data_4EB6
#
_model_server_result.job_id            wh5ILDX2b_pIkpwAPSpJJw 
_model_server_result.datetime_utc      '2024-11-13 06:53:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4eb6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":504}' 
#
_entry.id    4EB6 
#
_exptl.entry_id    4EB6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EB6 
_cell.length_a            64.69 
_cell.length_b            129.68 
_cell.length_c            252.75 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EB6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 I N N 
? 6 K N N 
? 6 P N N 
? 6 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 F O1B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? 
metalc ? metalc2 F O2G GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc3 G MG MG . A MG 502 1_555 R O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? 
metalc ? metalc4 G MG MG . A MG 502 1_555 R O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? 
metalc ? metalc5 G MG MG . A MG 502 1_555 R O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc6 G MG MG . A MG 502 1_555 R O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc7 L O1B GTP . C GTP 501 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc8 L O2G GTP . C GTP 501 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc9 M MG MG . C MG 502 1_555 T O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? 
metalc ? metalc10 M MG MG . C MG 502 1_555 T O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc11 M MG MG . C MG 502 1_555 T O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 385 n n 
S O2 SO4 doub 386 n n 
S O3 SO4 sing 387 n n 
S O4 SO4 sing 388 n n 
#
_atom_sites.entry_id                     4EB6 
_atom_sites.fract_transf_matrix[1][1]    0.015458 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007711 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003956 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 GTP A 1 501 501 GTP GTP . 
G 5 MG A 1 502 502 MG MG . 
H 6 SO4 A 1 503 503 SO4 SO4 . 
I 6 SO4 A 1 504 504 SO4 SO4 . 
J 7 GDP B 1 501 501 GDP GDP . 
K 6 SO4 B 1 502 502 SO4 SO4 . 
L 4 GTP C 1 501 501 GTP GTP . 
M 5 MG C 1 502 502 MG MG . 
N 8 VLB C 1 503 503 VLB VLB . 
O 7 GDP D 1 501 501 GDP GDP . 
P 6 SO4 D 1 502 502 SO4 SO4 . 
Q 6 SO4 D 1 503 503 SO4 SO4 . 
R 9 HOH A 1 601 601 HOH HOH . 
R 9 HOH A 2 602 602 HOH HOH . 
R 9 HOH A 3 603 603 HOH HOH . 
R 9 HOH A 4 604 604 HOH HOH . 
R 9 HOH A 5 605 605 HOH HOH . 
S 9 HOH B 1 601 601 HOH HOH . 
S 9 HOH B 2 602 602 HOH HOH . 
S 9 HOH B 3 603 603 HOH HOH . 
T 9 HOH C 1 601 601 HOH HOH . 
T 9 HOH C 2 602 602 HOH HOH . 
T 9 HOH C 3 603 603 HOH HOH . 
T 9 HOH C 4 604 604 HOH HOH . 
T 9 HOH C 5 605 605 HOH HOH . 
T 9 HOH C 6 606 606 HOH HOH . 
T 9 HOH C 7 607 607 HOH HOH . 
T 9 HOH C 8 608 608 HOH HOH . 
T 9 HOH C 9 609 609 HOH HOH . 
T 9 HOH C 10 610 610 HOH HOH . 
T 9 HOH C 11 611 611 HOH HOH . 
T 9 HOH C 12 612 612 HOH HOH . 
T 9 HOH C 13 613 613 HOH HOH . 
U 9 HOH D 1 601 601 HOH HOH . 
U 9 HOH D 2 602 602 HOH HOH . 
U 9 HOH D 3 603 603 HOH HOH . 
U 9 HOH D 4 604 604 HOH HOH . 
U 9 HOH D 5 605 605 HOH HOH . 
U 9 HOH D 6 606 606 HOH HOH . 
U 9 HOH D 7 607 607 HOH HOH . 
U 9 HOH D 8 608 608 HOH HOH . 
U 9 HOH D 9 609 609 HOH HOH . 
V 9 HOH E 1 201 201 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . I 6 18.097 48.497 82.599 1 246.33 ? S SO4 504 A 1 
HETATM 2 O O1 SO4 . . . I 6 17.489 47.336 81.952 1 250.76 ? O1 SO4 504 A 1 
HETATM 3 O O2 SO4 . . . I 6 17.667 49.716 81.906 1 251.04 ? O2 SO4 504 A 1 
HETATM 4 O O3 SO4 . . . I 6 17.672 48.551 84.004 1 251.99 ? O3 SO4 504 A 1 
HETATM 5 O O4 SO4 . . . I 6 19.559 48.388 82.532 1 251.46 ? O4 SO4 504 A 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           5 
#