data_4EB7
#
_model_server_result.job_id            eZlZMVf0s3VM1XiyXr6AWQ 
_model_server_result.datetime_utc      '2025-02-20 15:37:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4eb7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":404}' 
#
_entry.id    4EB7 
#
_exptl.entry_id    4EB7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EB7 
_cell.length_a            75.469 
_cell.length_b            96.129 
_cell.length_c            152.793 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EB7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C SG CYS 58 C CYS 58 1_555 J FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc2 C NE2 HIS 101 C HIS 101 1_555 J FE2 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? 
metalc ? metalc3 C SG CYS 102 C CYS 102 1_555 J FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc4 J FE2 FES . C FES 201 1_555 K S2 FES . C FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     4EB7 
_atom_sites.fract_transf_matrix[1][1]    0.01325 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010403 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006545 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 PLP A 1 401 1 PLP PLP . 
E 4 GOL A 1 402 3 GOL GOL . 
F 4 GOL A 1 403 4 GOL GOL . 
G 5 EPE A 1 404 6 EPE EPE . 
H 3 PLP B 1 401 2 PLP PLP . 
I 4 GOL B 1 402 5 GOL GOL . 
J 6 FES C 1 201 7 FES FES . 
K 6 FES C 1 202 8 FES H2S . 
L 7 HOH A 1 501 1 HOH HOH . 
L 7 HOH A 2 502 2 HOH HOH . 
L 7 HOH A 3 503 3 HOH HOH . 
L 7 HOH A 4 504 4 HOH HOH . 
L 7 HOH A 5 505 5 HOH HOH . 
L 7 HOH A 6 506 6 HOH HOH . 
L 7 HOH A 7 507 7 HOH HOH . 
L 7 HOH A 8 508 8 HOH HOH . 
L 7 HOH A 9 509 9 HOH HOH . 
L 7 HOH A 10 510 10 HOH HOH . 
L 7 HOH A 11 511 11 HOH HOH . 
L 7 HOH A 12 512 12 HOH HOH . 
L 7 HOH A 13 513 13 HOH HOH . 
L 7 HOH A 14 514 14 HOH HOH . 
L 7 HOH A 15 515 15 HOH HOH . 
L 7 HOH A 16 516 23 HOH HOH . 
L 7 HOH A 17 517 24 HOH HOH . 
L 7 HOH A 18 518 29 HOH HOH . 
L 7 HOH A 19 519 30 HOH HOH . 
L 7 HOH A 20 520 34 HOH HOH . 
L 7 HOH A 21 521 35 HOH HOH . 
L 7 HOH A 22 522 36 HOH HOH . 
L 7 HOH A 23 523 37 HOH HOH . 
L 7 HOH A 24 524 40 HOH HOH . 
L 7 HOH A 25 525 46 HOH HOH . 
M 7 HOH B 1 501 16 HOH HOH . 
M 7 HOH B 2 502 17 HOH HOH . 
M 7 HOH B 3 503 18 HOH HOH . 
M 7 HOH B 4 504 19 HOH HOH . 
M 7 HOH B 5 505 20 HOH HOH . 
M 7 HOH B 6 506 21 HOH HOH . 
M 7 HOH B 7 507 22 HOH HOH . 
M 7 HOH B 8 508 31 HOH HOH . 
M 7 HOH B 9 509 33 HOH HOH . 
M 7 HOH B 10 510 38 HOH HOH . 
M 7 HOH B 11 511 39 HOH HOH . 
M 7 HOH B 12 512 42 HOH HOH . 
M 7 HOH B 13 513 43 HOH HOH . 
M 7 HOH B 14 514 44 HOH HOH . 
M 7 HOH B 15 515 45 HOH HOH . 
N 7 HOH C 1 301 25 HOH HOH . 
N 7 HOH C 2 302 26 HOH HOH . 
N 7 HOH C 3 303 27 HOH HOH . 
N 7 HOH C 4 304 28 HOH HOH . 
N 7 HOH C 5 305 32 HOH HOH . 
N 7 HOH C 6 306 41 HOH HOH . 
N 7 HOH C 7 307 47 HOH HOH . 
N 7 HOH C 8 308 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . G 5 -24.444 15.776 -0.596 1 64.51 ? N1 EPE 404 A 1 
HETATM 2 C C2 EPE . . . G 5 -25.821 15.25 -0.333 1 63.71 ? C2 EPE 404 A 1 
HETATM 3 C C3 EPE . . . G 5 -25.84 13.885 0.363 1 64.97 ? C3 EPE 404 A 1 
HETATM 4 N N4 EPE . . . G 5 -24.679 13.01 0.133 1 66.39 ? N4 EPE 404 A 1 
HETATM 5 C C5 EPE . . . G 5 -23.384 13.577 -0.224 1 64.05 ? C5 EPE 404 A 1 
HETATM 6 C C6 EPE . . . G 5 -23.342 15.06 0.096 1 64.22 ? C6 EPE 404 A 1 
HETATM 7 C C7 EPE . . . G 5 -24.693 11.588 0.518 1 67.62 ? C7 EPE 404 A 1 
HETATM 8 C C8 EPE . . . G 5 -26.049 10.871 0.469 1 67.53 ? C8 EPE 404 A 1 
HETATM 9 O O8 EPE . . . G 5 -26.786 11.252 -0.676 1 67.01 ? O8 EPE 404 A 1 
HETATM 10 C C9 EPE . . . G 5 -24.253 17.207 -0.278 1 62.25 ? C9 EPE 404 A 1 
HETATM 11 C C10 EPE . . . G 5 -25.412 18.087 -0.679 1 61.25 ? C10 EPE 404 A 1 
HETATM 12 S S EPE . . . G 5 -25.53 18.131 -2.474 1 62.04 ? S EPE 404 A 1 
HETATM 13 O O1S EPE . . . G 5 -25.549 16.735 -2.904 1 64.83 ? O1S EPE 404 A 1 
HETATM 14 O O2S EPE . . . G 5 -26.784 18.781 -2.877 1 60.02 ? O2S EPE 404 A 1 
HETATM 15 O O3S EPE . . . G 5 -24.38 18.833 -3.047 1 61.75 ? O3S EPE 404 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          26 
_model_server_stats.element_count           15 
#