data_4EDM
#
_model_server_result.job_id            iusxDJKxyw5mN_AQeOBW8w 
_model_server_result.datetime_utc      '2024-12-26 12:03:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4edm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":404}' 
#
_entry.id    4EDM 
#
_exptl.entry_id    4EDM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EDM 
_cell.length_a            49.36 
_cell.length_b            67.438 
_cell.length_c            105.712 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EDM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     4EDM 
_atom_sites.fract_transf_matrix[1][1]    0.020259 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014828 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00946 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 401 3 EDO EDO . 
D 2 EDO A 1 402 4 EDO EDO . 
E 2 EDO A 1 403 5 EDO EDO . 
F 2 EDO A 1 404 6 EDO EDO . 
G 2 EDO B 1 401 2 EDO EDO . 
H 2 EDO B 1 402 1 EDO EDO . 
I 2 EDO B 1 403 7 EDO EDO . 
J 3 HOH A 1 501 1 HOH HOH . 
J 3 HOH A 2 502 2 HOH HOH . 
J 3 HOH A 3 503 3 HOH HOH . 
J 3 HOH A 4 504 4 HOH HOH . 
J 3 HOH A 5 505 5 HOH HOH . 
J 3 HOH A 6 506 8 HOH HOH . 
J 3 HOH A 7 507 9 HOH HOH . 
J 3 HOH A 8 508 10 HOH HOH . 
J 3 HOH A 9 509 11 HOH HOH . 
J 3 HOH A 10 510 13 HOH HOH . 
J 3 HOH A 11 511 15 HOH HOH . 
J 3 HOH A 12 512 19 HOH HOH . 
J 3 HOH A 13 513 22 HOH HOH . 
J 3 HOH A 14 514 26 HOH HOH . 
J 3 HOH A 15 515 28 HOH HOH . 
J 3 HOH A 16 516 29 HOH HOH . 
J 3 HOH A 17 517 31 HOH HOH . 
J 3 HOH A 18 518 34 HOH HOH . 
J 3 HOH A 19 519 35 HOH HOH . 
J 3 HOH A 20 520 36 HOH HOH . 
J 3 HOH A 21 521 38 HOH HOH . 
J 3 HOH A 22 522 39 HOH HOH . 
J 3 HOH A 23 523 40 HOH HOH . 
J 3 HOH A 24 524 41 HOH HOH . 
J 3 HOH A 25 525 44 HOH HOH . 
J 3 HOH A 26 526 45 HOH HOH . 
J 3 HOH A 27 527 46 HOH HOH . 
J 3 HOH A 28 528 47 HOH HOH . 
J 3 HOH A 29 529 48 HOH HOH . 
J 3 HOH A 30 530 49 HOH HOH . 
J 3 HOH A 31 531 50 HOH HOH . 
J 3 HOH A 32 532 51 HOH HOH . 
J 3 HOH A 33 533 52 HOH HOH . 
J 3 HOH A 34 534 54 HOH HOH . 
J 3 HOH A 35 535 57 HOH HOH . 
J 3 HOH A 36 536 58 HOH HOH . 
J 3 HOH A 37 537 59 HOH HOH . 
J 3 HOH A 38 538 60 HOH HOH . 
J 3 HOH A 39 539 67 HOH HOH . 
J 3 HOH A 40 540 69 HOH HOH . 
J 3 HOH A 41 541 70 HOH HOH . 
J 3 HOH A 42 542 72 HOH HOH . 
J 3 HOH A 43 543 75 HOH HOH . 
J 3 HOH A 44 544 77 HOH HOH . 
J 3 HOH A 45 545 78 HOH HOH . 
J 3 HOH A 46 546 79 HOH HOH . 
J 3 HOH A 47 547 80 HOH HOH . 
J 3 HOH A 48 548 81 HOH HOH . 
J 3 HOH A 49 549 82 HOH HOH . 
J 3 HOH A 50 550 84 HOH HOH . 
J 3 HOH A 51 551 85 HOH HOH . 
J 3 HOH A 52 552 86 HOH HOH . 
J 3 HOH A 53 553 87 HOH HOH . 
J 3 HOH A 54 554 88 HOH HOH . 
J 3 HOH A 55 555 89 HOH HOH . 
J 3 HOH A 56 556 91 HOH HOH . 
J 3 HOH A 57 557 95 HOH HOH . 
J 3 HOH A 58 558 97 HOH HOH . 
J 3 HOH A 59 559 98 HOH HOH . 
J 3 HOH A 60 560 99 HOH HOH . 
J 3 HOH A 61 561 100 HOH HOH . 
J 3 HOH A 62 562 101 HOH HOH . 
J 3 HOH A 63 563 102 HOH HOH . 
J 3 HOH A 64 564 103 HOH HOH . 
J 3 HOH A 65 565 104 HOH HOH . 
J 3 HOH A 66 566 105 HOH HOH . 
J 3 HOH A 67 567 106 HOH HOH . 
J 3 HOH A 68 568 107 HOH HOH . 
J 3 HOH A 69 569 108 HOH HOH . 
J 3 HOH A 70 570 109 HOH HOH . 
J 3 HOH A 71 571 110 HOH HOH . 
J 3 HOH A 72 572 112 HOH HOH . 
J 3 HOH A 73 573 115 HOH HOH . 
J 3 HOH A 74 574 116 HOH HOH . 
J 3 HOH A 75 575 53 HOH HOH . 
K 3 HOH B 1 501 6 HOH HOH . 
K 3 HOH B 2 502 7 HOH HOH . 
K 3 HOH B 3 503 12 HOH HOH . 
K 3 HOH B 4 504 14 HOH HOH . 
K 3 HOH B 5 505 16 HOH HOH . 
K 3 HOH B 6 506 17 HOH HOH . 
K 3 HOH B 7 507 18 HOH HOH . 
K 3 HOH B 8 508 20 HOH HOH . 
K 3 HOH B 9 509 21 HOH HOH . 
K 3 HOH B 10 510 23 HOH HOH . 
K 3 HOH B 11 511 24 HOH HOH . 
K 3 HOH B 12 512 25 HOH HOH . 
K 3 HOH B 13 513 27 HOH HOH . 
K 3 HOH B 14 514 30 HOH HOH . 
K 3 HOH B 15 515 32 HOH HOH . 
K 3 HOH B 16 516 33 HOH HOH . 
K 3 HOH B 17 517 37 HOH HOH . 
K 3 HOH B 18 518 42 HOH HOH . 
K 3 HOH B 19 519 43 HOH HOH . 
K 3 HOH B 20 520 55 HOH HOH . 
K 3 HOH B 21 521 56 HOH HOH . 
K 3 HOH B 22 522 61 HOH HOH . 
K 3 HOH B 23 523 62 HOH HOH . 
K 3 HOH B 24 524 63 HOH HOH . 
K 3 HOH B 25 525 64 HOH HOH . 
K 3 HOH B 26 526 65 HOH HOH . 
K 3 HOH B 27 527 66 HOH HOH . 
K 3 HOH B 28 528 68 HOH HOH . 
K 3 HOH B 29 529 71 HOH HOH . 
K 3 HOH B 30 530 73 HOH HOH . 
K 3 HOH B 31 531 74 HOH HOH . 
K 3 HOH B 32 532 76 HOH HOH . 
K 3 HOH B 33 533 83 HOH HOH . 
K 3 HOH B 34 534 90 HOH HOH . 
K 3 HOH B 35 535 92 HOH HOH . 
K 3 HOH B 36 536 93 HOH HOH . 
K 3 HOH B 37 537 94 HOH HOH . 
K 3 HOH B 38 538 96 HOH HOH . 
K 3 HOH B 39 539 111 HOH HOH . 
K 3 HOH B 40 540 113 HOH HOH . 
K 3 HOH B 41 541 114 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 2 29.696 22.592 12.286 1 58.35 ? C1 EDO 404 A 1 
HETATM 2 O O1 EDO . . . F 2 29.113 23.738 12.919 1 64.02 ? O1 EDO 404 A 1 
HETATM 3 C C2 EDO . . . F 2 29.868 21.464 13.286 1 52.29 ? C2 EDO 404 A 1 
HETATM 4 O O2 EDO . . . F 2 29.666 20.197 12.626 1 53.63 ? O2 EDO 404 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#