data_4EF2 # _model_server_result.job_id RLoztwwO0l-Cx3dqE0QFNw _model_server_result.datetime_utc '2025-03-05 22:11:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ef2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 4EF2 # _exptl.entry_id 4EF2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EF2 _cell.length_a 46.225 _cell.length_b 75.691 _cell.length_c 143.815 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EF2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 160 A ILE 186 1_555 A N MSE 161 A MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C MSE 161 A MSE 187 1_555 A N THR 162 A THR 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C ILE 160 B ILE 186 1_555 B N MSE 161 B MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 B C MSE 161 B MSE 187 1_555 B N THR 162 B THR 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 282 n n C1 C2 PEG sing 283 n n C1 H11 PEG sing 284 n n C1 H12 PEG sing 285 n n O1 HO1 PEG sing 286 n n C2 O2 PEG sing 287 n n C2 H21 PEG sing 288 n n C2 H22 PEG sing 289 n n O2 C3 PEG sing 290 n n C3 C4 PEG sing 291 n n C3 H31 PEG sing 292 n n C3 H32 PEG sing 293 n n C4 O4 PEG sing 294 n n C4 H41 PEG sing 295 n n C4 H42 PEG sing 296 n n O4 HO4 PEG sing 297 n n # _atom_sites.entry_id 4EF2 _atom_sites.fract_transf_matrix[1][1] 0.021633 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MSE A 1 301 280 MSE MSE . D 3 CL A 1 302 300 CL CL . E 4 PGE A 1 303 301 PGE PGE . F 5 PEG A 1 304 302 PEG PEG . G 2 MSE B 1 301 280 MSE MSE . H 5 PEG B 1 302 303 PEG PEG . I 6 PE8 B 1 303 304 PE8 PE8 . J 7 HOH A 1 401 305 HOH HOH . J 7 HOH A 2 402 306 HOH HOH . J 7 HOH A 3 403 307 HOH HOH . J 7 HOH A 4 404 308 HOH HOH . J 7 HOH A 5 405 310 HOH HOH . J 7 HOH A 6 406 311 HOH HOH . J 7 HOH A 7 407 312 HOH HOH . J 7 HOH A 8 408 313 HOH HOH . J 7 HOH A 9 409 314 HOH HOH . J 7 HOH A 10 410 315 HOH HOH . J 7 HOH A 11 411 316 HOH HOH . J 7 HOH A 12 412 317 HOH HOH . J 7 HOH A 13 413 318 HOH HOH . J 7 HOH A 14 414 319 HOH HOH . J 7 HOH A 15 415 320 HOH HOH . J 7 HOH A 16 416 321 HOH HOH . J 7 HOH A 17 417 322 HOH HOH . J 7 HOH A 18 418 323 HOH HOH . J 7 HOH A 19 419 324 HOH HOH . J 7 HOH A 20 420 325 HOH HOH . J 7 HOH A 21 421 326 HOH HOH . J 7 HOH A 22 422 340 HOH HOH . J 7 HOH A 23 423 341 HOH HOH . J 7 HOH A 24 424 344 HOH HOH . J 7 HOH A 25 425 348 HOH HOH . J 7 HOH A 26 426 349 HOH HOH . J 7 HOH A 27 427 350 HOH HOH . J 7 HOH A 28 428 351 HOH HOH . J 7 HOH A 29 429 352 HOH HOH . J 7 HOH A 30 430 353 HOH HOH . J 7 HOH A 31 431 354 HOH HOH . J 7 HOH A 32 432 355 HOH HOH . J 7 HOH A 33 433 356 HOH HOH . J 7 HOH A 34 434 357 HOH HOH . J 7 HOH A 35 435 358 HOH HOH . J 7 HOH A 36 436 359 HOH HOH . J 7 HOH A 37 437 360 HOH HOH . J 7 HOH A 38 438 361 HOH HOH . J 7 HOH A 39 439 362 HOH HOH . J 7 HOH A 40 440 363 HOH HOH . J 7 HOH A 41 441 364 HOH HOH . J 7 HOH A 42 442 365 HOH HOH . J 7 HOH A 43 443 366 HOH HOH . J 7 HOH A 44 444 367 HOH HOH . J 7 HOH A 45 445 368 HOH HOH . J 7 HOH A 46 446 369 HOH HOH . J 7 HOH A 47 447 370 HOH HOH . J 7 HOH A 48 448 371 HOH HOH . J 7 HOH A 49 449 372 HOH HOH . J 7 HOH A 50 450 373 HOH HOH . J 7 HOH A 51 451 374 HOH HOH . J 7 HOH A 52 452 382 HOH HOH . J 7 HOH A 53 453 383 HOH HOH . J 7 HOH A 54 454 384 HOH HOH . J 7 HOH A 55 455 385 HOH HOH . J 7 HOH A 56 456 386 HOH HOH . J 7 HOH A 57 457 387 HOH HOH . J 7 HOH A 58 458 388 HOH HOH . J 7 HOH A 59 459 389 HOH HOH . J 7 HOH A 60 460 390 HOH HOH . J 7 HOH A 61 461 391 HOH HOH . J 7 HOH A 62 462 392 HOH HOH . J 7 HOH A 63 463 393 HOH HOH . J 7 HOH A 64 464 400 HOH HOH . J 7 HOH A 65 465 401 HOH HOH . J 7 HOH A 66 466 402 HOH HOH . K 7 HOH B 1 401 309 HOH HOH . K 7 HOH B 2 402 327 HOH HOH . K 7 HOH B 3 403 328 HOH HOH . K 7 HOH B 4 404 329 HOH HOH . K 7 HOH B 5 405 330 HOH HOH . K 7 HOH B 6 406 331 HOH HOH . K 7 HOH B 7 407 332 HOH HOH . K 7 HOH B 8 408 333 HOH HOH . K 7 HOH B 9 409 334 HOH HOH . K 7 HOH B 10 410 335 HOH HOH . K 7 HOH B 11 411 336 HOH HOH . K 7 HOH B 12 412 337 HOH HOH . K 7 HOH B 13 413 338 HOH HOH . K 7 HOH B 14 414 339 HOH HOH . K 7 HOH B 15 415 342 HOH HOH . K 7 HOH B 16 416 343 HOH HOH . K 7 HOH B 17 417 345 HOH HOH . K 7 HOH B 18 418 346 HOH HOH . K 7 HOH B 19 419 347 HOH HOH . K 7 HOH B 20 420 375 HOH HOH . K 7 HOH B 21 421 376 HOH HOH . K 7 HOH B 22 422 377 HOH HOH . K 7 HOH B 23 423 378 HOH HOH . K 7 HOH B 24 424 379 HOH HOH . K 7 HOH B 25 425 380 HOH HOH . K 7 HOH B 26 426 381 HOH HOH . K 7 HOH B 27 427 394 HOH HOH . K 7 HOH B 28 428 395 HOH HOH . K 7 HOH B 29 429 396 HOH HOH . K 7 HOH B 30 430 397 HOH HOH . K 7 HOH B 31 431 398 HOH HOH . K 7 HOH B 32 432 399 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . H 5 23.931 41.727 10.701 1 65.93 ? C1 PEG 302 B 1 HETATM 2 O O1 PEG . . . H 5 24.255 41.668 12.094 1 84.29 ? O1 PEG 302 B 1 HETATM 3 C C2 PEG . . . H 5 24.154 43.137 10.165 1 56.12 ? C2 PEG 302 B 1 HETATM 4 O O2 PEG . . . H 5 24.599 43.031 8.8 1 75.1 ? O2 PEG 302 B 1 HETATM 5 C C3 PEG . . . H 5 25.6 43.926 8.299 1 66.57 ? C3 PEG 302 B 1 HETATM 6 C C4 PEG . . . H 5 26.85 43.151 7.95 1 72.01 ? C4 PEG 302 B 1 HETATM 7 O O4 PEG . . . H 5 27.966 44.013 8.178 1 67.53 ? O4 PEG 302 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #