data_4EF4 # _model_server_result.job_id z1l8DGYDMo1tsHhekEQzLg _model_server_result.datetime_utc '2024-11-21 23:15:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ef4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 4EF4 # _exptl.entry_id 4EF4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.03 _cell.angle_gamma 90 _cell.entry_id 4EF4 _cell.length_a 61.375 _cell.length_b 72.84 _cell.length_c 62.44 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EF4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 91 A ASP 205 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc2 A OE1 GLU 202 A GLU 316 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc3 A OE2 GLU 202 A GLU 316 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc4 D CA CA . A CA 402 1_555 F O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc5 D CA CA . A CA 402 1_555 F O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc6 D CA CA . A CA 402 1_555 F O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc7 B O VAL 227 B VAL 341 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc8 E CA CA . B CA 401 1_555 G O HOH . B HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EF4 _atom_sites.fract_transf_matrix[1][1] 0.016293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002009 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C2E A 1 401 1 C2E C2E . D 3 CA A 1 402 2 CA CA . E 3 CA B 1 401 1 CA CA . F 4 HOH A 1 501 1 HOH HOH . F 4 HOH A 2 502 2 HOH HOH . F 4 HOH A 3 503 3 HOH HOH . F 4 HOH A 4 504 6 HOH HOH . F 4 HOH A 5 505 10 HOH HOH . F 4 HOH A 6 506 11 HOH HOH . F 4 HOH A 7 507 12 HOH HOH . F 4 HOH A 8 508 13 HOH HOH . F 4 HOH A 9 509 14 HOH HOH . F 4 HOH A 10 510 15 HOH HOH . F 4 HOH A 11 511 17 HOH HOH . F 4 HOH A 12 512 18 HOH HOH . F 4 HOH A 13 513 19 HOH HOH . F 4 HOH A 14 514 20 HOH HOH . F 4 HOH A 15 515 21 HOH HOH . F 4 HOH A 16 516 22 HOH HOH . F 4 HOH A 17 517 23 HOH HOH . F 4 HOH A 18 518 24 HOH HOH . F 4 HOH A 19 519 26 HOH HOH . F 4 HOH A 20 520 31 HOH HOH . F 4 HOH A 21 521 34 HOH HOH . F 4 HOH A 22 522 36 HOH HOH . F 4 HOH A 23 523 37 HOH HOH . F 4 HOH A 24 524 39 HOH HOH . F 4 HOH A 25 525 40 HOH HOH . F 4 HOH A 26 526 41 HOH HOH . F 4 HOH A 27 527 42 HOH HOH . F 4 HOH A 28 528 43 HOH HOH . F 4 HOH A 29 529 44 HOH HOH . F 4 HOH A 30 530 45 HOH HOH . F 4 HOH A 31 531 50 HOH HOH . F 4 HOH A 32 532 53 HOH HOH . F 4 HOH A 33 533 54 HOH HOH . F 4 HOH A 34 534 56 HOH HOH . F 4 HOH A 35 535 57 HOH HOH . F 4 HOH A 36 536 58 HOH HOH . F 4 HOH A 37 537 59 HOH HOH . F 4 HOH A 38 538 66 HOH HOH . F 4 HOH A 39 539 67 HOH HOH . F 4 HOH A 40 540 71 HOH HOH . F 4 HOH A 41 541 72 HOH HOH . F 4 HOH A 42 542 78 HOH HOH . F 4 HOH A 43 543 79 HOH HOH . F 4 HOH A 44 544 81 HOH HOH . F 4 HOH A 45 545 83 HOH HOH . F 4 HOH A 46 546 87 HOH HOH . F 4 HOH A 47 547 91 HOH HOH . F 4 HOH A 48 548 94 HOH HOH . F 4 HOH A 49 549 97 HOH HOH . F 4 HOH A 50 550 99 HOH HOH . G 4 HOH B 1 501 4 HOH HOH . G 4 HOH B 2 502 5 HOH HOH . G 4 HOH B 3 503 7 HOH HOH . G 4 HOH B 4 504 8 HOH HOH . G 4 HOH B 5 505 9 HOH HOH . G 4 HOH B 6 506 16 HOH HOH . G 4 HOH B 7 507 25 HOH HOH . G 4 HOH B 8 508 27 HOH HOH . G 4 HOH B 9 509 28 HOH HOH . G 4 HOH B 10 510 29 HOH HOH . G 4 HOH B 11 511 30 HOH HOH . G 4 HOH B 12 512 32 HOH HOH . G 4 HOH B 13 513 33 HOH HOH . G 4 HOH B 14 514 35 HOH HOH . G 4 HOH B 15 515 38 HOH HOH . G 4 HOH B 16 516 46 HOH HOH . G 4 HOH B 17 517 47 HOH HOH . G 4 HOH B 18 518 48 HOH HOH . G 4 HOH B 19 519 49 HOH HOH . G 4 HOH B 20 520 51 HOH HOH . G 4 HOH B 21 521 52 HOH HOH . G 4 HOH B 22 522 55 HOH HOH . G 4 HOH B 23 523 60 HOH HOH . G 4 HOH B 24 524 61 HOH HOH . G 4 HOH B 25 525 62 HOH HOH . G 4 HOH B 26 526 63 HOH HOH . G 4 HOH B 27 527 64 HOH HOH . G 4 HOH B 28 528 65 HOH HOH . G 4 HOH B 29 529 68 HOH HOH . G 4 HOH B 30 530 69 HOH HOH . G 4 HOH B 31 531 70 HOH HOH . G 4 HOH B 32 532 73 HOH HOH . G 4 HOH B 33 533 74 HOH HOH . G 4 HOH B 34 534 75 HOH HOH . G 4 HOH B 35 535 76 HOH HOH . G 4 HOH B 36 536 77 HOH HOH . G 4 HOH B 37 537 80 HOH HOH . G 4 HOH B 38 538 82 HOH HOH . G 4 HOH B 39 539 84 HOH HOH . G 4 HOH B 40 540 85 HOH HOH . G 4 HOH B 41 541 86 HOH HOH . G 4 HOH B 42 542 88 HOH HOH . G 4 HOH B 43 543 89 HOH HOH . G 4 HOH B 44 544 90 HOH HOH . G 4 HOH B 45 545 92 HOH HOH . G 4 HOH B 46 546 93 HOH HOH . G 4 HOH B 47 547 95 HOH HOH . G 4 HOH B 48 548 96 HOH HOH . G 4 HOH B 49 549 98 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -25.167 _atom_site.Cartn_y 52.247 _atom_site.Cartn_z -30.583 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #