data_4EF4
#
_model_server_result.job_id            ElzvgCq9YmAF0vGawuTnpw 
_model_server_result.datetime_utc      '2024-10-19 03:52:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ef4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4EF4 
#
_exptl.entry_id    4EF4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.03 
_cell.angle_gamma         90 
_cell.entry_id            4EF4 
_cell.length_a            61.375 
_cell.length_b            72.84 
_cell.length_c            62.44 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EF4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 91 A ASP 205 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? 
metalc ? metalc2 A OE1 GLU 202 A GLU 316 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? 
metalc ? metalc3 A OE2 GLU 202 A GLU 316 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
metalc ? metalc4 D CA CA . A CA 402 1_555 F O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc5 D CA CA . A CA 402 1_555 F O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? 
metalc ? metalc6 D CA CA . A CA 402 1_555 F O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? 
metalc ? metalc7 B O VAL 227 B VAL 341 1_555 E CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? 
metalc ? metalc8 E CA CA . B CA 401 1_555 G O HOH . B HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4EF4 
_atom_sites.fract_transf_matrix[1][1]    0.016293 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002009 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013729 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016137 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 C2E A 1 401 1 C2E C2E . 
D 3 CA A 1 402 2 CA CA . 
E 3 CA B 1 401 1 CA CA . 
F 4 HOH A 1 501 1 HOH HOH . 
F 4 HOH A 2 502 2 HOH HOH . 
F 4 HOH A 3 503 3 HOH HOH . 
F 4 HOH A 4 504 6 HOH HOH . 
F 4 HOH A 5 505 10 HOH HOH . 
F 4 HOH A 6 506 11 HOH HOH . 
F 4 HOH A 7 507 12 HOH HOH . 
F 4 HOH A 8 508 13 HOH HOH . 
F 4 HOH A 9 509 14 HOH HOH . 
F 4 HOH A 10 510 15 HOH HOH . 
F 4 HOH A 11 511 17 HOH HOH . 
F 4 HOH A 12 512 18 HOH HOH . 
F 4 HOH A 13 513 19 HOH HOH . 
F 4 HOH A 14 514 20 HOH HOH . 
F 4 HOH A 15 515 21 HOH HOH . 
F 4 HOH A 16 516 22 HOH HOH . 
F 4 HOH A 17 517 23 HOH HOH . 
F 4 HOH A 18 518 24 HOH HOH . 
F 4 HOH A 19 519 26 HOH HOH . 
F 4 HOH A 20 520 31 HOH HOH . 
F 4 HOH A 21 521 34 HOH HOH . 
F 4 HOH A 22 522 36 HOH HOH . 
F 4 HOH A 23 523 37 HOH HOH . 
F 4 HOH A 24 524 39 HOH HOH . 
F 4 HOH A 25 525 40 HOH HOH . 
F 4 HOH A 26 526 41 HOH HOH . 
F 4 HOH A 27 527 42 HOH HOH . 
F 4 HOH A 28 528 43 HOH HOH . 
F 4 HOH A 29 529 44 HOH HOH . 
F 4 HOH A 30 530 45 HOH HOH . 
F 4 HOH A 31 531 50 HOH HOH . 
F 4 HOH A 32 532 53 HOH HOH . 
F 4 HOH A 33 533 54 HOH HOH . 
F 4 HOH A 34 534 56 HOH HOH . 
F 4 HOH A 35 535 57 HOH HOH . 
F 4 HOH A 36 536 58 HOH HOH . 
F 4 HOH A 37 537 59 HOH HOH . 
F 4 HOH A 38 538 66 HOH HOH . 
F 4 HOH A 39 539 67 HOH HOH . 
F 4 HOH A 40 540 71 HOH HOH . 
F 4 HOH A 41 541 72 HOH HOH . 
F 4 HOH A 42 542 78 HOH HOH . 
F 4 HOH A 43 543 79 HOH HOH . 
F 4 HOH A 44 544 81 HOH HOH . 
F 4 HOH A 45 545 83 HOH HOH . 
F 4 HOH A 46 546 87 HOH HOH . 
F 4 HOH A 47 547 91 HOH HOH . 
F 4 HOH A 48 548 94 HOH HOH . 
F 4 HOH A 49 549 97 HOH HOH . 
F 4 HOH A 50 550 99 HOH HOH . 
G 4 HOH B 1 501 4 HOH HOH . 
G 4 HOH B 2 502 5 HOH HOH . 
G 4 HOH B 3 503 7 HOH HOH . 
G 4 HOH B 4 504 8 HOH HOH . 
G 4 HOH B 5 505 9 HOH HOH . 
G 4 HOH B 6 506 16 HOH HOH . 
G 4 HOH B 7 507 25 HOH HOH . 
G 4 HOH B 8 508 27 HOH HOH . 
G 4 HOH B 9 509 28 HOH HOH . 
G 4 HOH B 10 510 29 HOH HOH . 
G 4 HOH B 11 511 30 HOH HOH . 
G 4 HOH B 12 512 32 HOH HOH . 
G 4 HOH B 13 513 33 HOH HOH . 
G 4 HOH B 14 514 35 HOH HOH . 
G 4 HOH B 15 515 38 HOH HOH . 
G 4 HOH B 16 516 46 HOH HOH . 
G 4 HOH B 17 517 47 HOH HOH . 
G 4 HOH B 18 518 48 HOH HOH . 
G 4 HOH B 19 519 49 HOH HOH . 
G 4 HOH B 20 520 51 HOH HOH . 
G 4 HOH B 21 521 52 HOH HOH . 
G 4 HOH B 22 522 55 HOH HOH . 
G 4 HOH B 23 523 60 HOH HOH . 
G 4 HOH B 24 524 61 HOH HOH . 
G 4 HOH B 25 525 62 HOH HOH . 
G 4 HOH B 26 526 63 HOH HOH . 
G 4 HOH B 27 527 64 HOH HOH . 
G 4 HOH B 28 528 65 HOH HOH . 
G 4 HOH B 29 529 68 HOH HOH . 
G 4 HOH B 30 530 69 HOH HOH . 
G 4 HOH B 31 531 70 HOH HOH . 
G 4 HOH B 32 532 73 HOH HOH . 
G 4 HOH B 33 533 74 HOH HOH . 
G 4 HOH B 34 534 75 HOH HOH . 
G 4 HOH B 35 535 76 HOH HOH . 
G 4 HOH B 36 536 77 HOH HOH . 
G 4 HOH B 37 537 80 HOH HOH . 
G 4 HOH B 38 538 82 HOH HOH . 
G 4 HOH B 39 539 84 HOH HOH . 
G 4 HOH B 40 540 85 HOH HOH . 
G 4 HOH B 41 541 86 HOH HOH . 
G 4 HOH B 42 542 88 HOH HOH . 
G 4 HOH B 43 543 89 HOH HOH . 
G 4 HOH B 44 544 90 HOH HOH . 
G 4 HOH B 45 545 92 HOH HOH . 
G 4 HOH B 46 546 93 HOH HOH . 
G 4 HOH B 47 547 95 HOH HOH . 
G 4 HOH B 48 548 96 HOH HOH . 
G 4 HOH B 49 549 98 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -0.075 
_atom_site.Cartn_y               18.415 
_atom_site.Cartn_z               1.924 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        57.03 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           1 
#