data_4EG1 # _model_server_result.job_id cHrsooFtbmg9epZkaJo2_g _model_server_result.datetime_utc '2024-12-04 06:03:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eg1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":806}' # _entry.id 4EG1 # _exptl.entry_id 4EG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EG1 _cell.length_a 85.037 _cell.length_b 105.935 _cell.length_c 207.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 238 A HIS 469 1_555 A N CAS 239 A CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CAS 239 A CAS 470 1_555 A N VAL 240 A VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C HIS 238 B HIS 469 1_555 B N CAS 239 B CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 B C CAS 239 B CAS 470 1_555 B N VAL 240 B VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 150 n n C1 C2 GOL sing 151 n n C1 H11 GOL sing 152 n n C1 H12 GOL sing 153 n n O1 HO1 GOL sing 154 n n C2 O2 GOL sing 155 n n C2 C3 GOL sing 156 n n C2 H2 GOL sing 157 n n O2 HO2 GOL sing 158 n n C3 O3 GOL sing 159 n n C3 H31 GOL sing 160 n n C3 H32 GOL sing 161 n n O3 HO3 GOL sing 162 n n # _atom_sites.entry_id 4EG1 _atom_sites.fract_transf_matrix[1][1] 0.01176 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 801 900 GOL GOL . D 2 GOL A 1 802 901 GOL GOL . E 2 GOL A 1 803 902 GOL GOL . F 2 GOL A 1 804 903 GOL GOL . G 2 GOL A 1 805 904 GOL GOL . H 2 GOL A 1 806 905 GOL GOL . I 2 GOL A 1 807 906 GOL GOL . J 3 MET A 1 808 800 MET MET . K 2 GOL B 1 801 900 GOL GOL . L 2 GOL B 1 802 901 GOL GOL . M 2 GOL B 1 803 902 GOL GOL . N 2 GOL B 1 804 903 GOL GOL . O 2 GOL B 1 805 904 GOL GOL . P 3 MET B 1 806 800 MET MET . Q 4 HOH A 1 1000 1000 HOH HOH . Q 4 HOH A 2 1001 1001 HOH HOH . Q 4 HOH A 3 1002 1002 HOH HOH . Q 4 HOH A 4 1003 1003 HOH HOH . Q 4 HOH A 5 1004 1004 HOH HOH . Q 4 HOH A 6 1005 1005 HOH HOH . Q 4 HOH A 7 1006 1006 HOH HOH . Q 4 HOH A 8 1007 1007 HOH HOH . Q 4 HOH A 9 1008 1008 HOH HOH . Q 4 HOH A 10 1009 1009 HOH HOH . Q 4 HOH A 11 1010 1010 HOH HOH . Q 4 HOH A 12 1011 1011 HOH HOH . Q 4 HOH A 13 1012 1012 HOH HOH . Q 4 HOH A 14 1013 1013 HOH HOH . Q 4 HOH A 15 1014 1014 HOH HOH . Q 4 HOH A 16 1015 1015 HOH HOH . Q 4 HOH A 17 1016 1016 HOH HOH . Q 4 HOH A 18 1017 1017 HOH HOH . Q 4 HOH A 19 1018 1018 HOH HOH . Q 4 HOH A 20 1019 1019 HOH HOH . Q 4 HOH A 21 1020 1020 HOH HOH . Q 4 HOH A 22 1021 1021 HOH HOH . Q 4 HOH A 23 1022 1022 HOH HOH . Q 4 HOH A 24 1023 1023 HOH HOH . Q 4 HOH A 25 1024 1024 HOH HOH . Q 4 HOH A 26 1025 1025 HOH HOH . Q 4 HOH A 27 1026 1026 HOH HOH . Q 4 HOH A 28 1027 1027 HOH HOH . Q 4 HOH A 29 1028 1028 HOH HOH . Q 4 HOH A 30 1029 1029 HOH HOH . Q 4 HOH A 31 1030 1030 HOH HOH . Q 4 HOH A 32 1031 1031 HOH HOH . Q 4 HOH A 33 1032 1032 HOH HOH . Q 4 HOH A 34 1033 1033 HOH HOH . Q 4 HOH A 35 1034 1034 HOH HOH . Q 4 HOH A 36 1035 1035 HOH HOH . Q 4 HOH A 37 1036 1036 HOH HOH . Q 4 HOH A 38 1037 1037 HOH HOH . Q 4 HOH A 39 1038 1038 HOH HOH . Q 4 HOH A 40 1039 1039 HOH HOH . Q 4 HOH A 41 1040 1040 HOH HOH . Q 4 HOH A 42 1041 1041 HOH HOH . R 4 HOH B 1 1000 1000 HOH HOH . R 4 HOH B 2 1001 1001 HOH HOH . R 4 HOH B 3 1002 1002 HOH HOH . R 4 HOH B 4 1003 1003 HOH HOH . R 4 HOH B 5 1004 1004 HOH HOH . R 4 HOH B 6 1005 1005 HOH HOH . R 4 HOH B 7 1006 1006 HOH HOH . R 4 HOH B 8 1007 1007 HOH HOH . R 4 HOH B 9 1008 1008 HOH HOH . R 4 HOH B 10 1009 1009 HOH HOH . R 4 HOH B 11 1010 1010 HOH HOH . R 4 HOH B 12 1011 1011 HOH HOH . R 4 HOH B 13 1012 1012 HOH HOH . R 4 HOH B 14 1013 1013 HOH HOH . R 4 HOH B 15 1014 1014 HOH HOH . R 4 HOH B 16 1015 1015 HOH HOH . R 4 HOH B 17 1016 1016 HOH HOH . R 4 HOH B 18 1017 1017 HOH HOH . R 4 HOH B 19 1018 1018 HOH HOH . R 4 HOH B 20 1019 1019 HOH HOH . R 4 HOH B 21 1020 1020 HOH HOH . R 4 HOH B 22 1021 1021 HOH HOH . R 4 HOH B 23 1022 1022 HOH HOH . R 4 HOH B 24 1023 1023 HOH HOH . R 4 HOH B 25 1024 1024 HOH HOH . R 4 HOH B 26 1025 1025 HOH HOH . R 4 HOH B 27 1026 1026 HOH HOH . R 4 HOH B 28 1027 1027 HOH HOH . R 4 HOH B 29 1028 1028 HOH HOH . R 4 HOH B 30 1029 1029 HOH HOH . R 4 HOH B 31 1030 1030 HOH HOH . R 4 HOH B 32 1031 1031 HOH HOH . R 4 HOH B 33 1032 1032 HOH HOH . R 4 HOH B 34 1033 1033 HOH HOH . R 4 HOH B 35 1034 1034 HOH HOH . R 4 HOH B 36 1035 1035 HOH HOH . R 4 HOH B 37 1036 1036 HOH HOH . R 4 HOH B 38 1037 1037 HOH HOH . R 4 HOH B 39 1038 1038 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 2 -19.849 22.203 47.257 1 66.46 ? C1 GOL 806 A 1 HETATM 2 O O1 GOL . . . H 2 -20.93 22.951 47.793 1 67.77 ? O1 GOL 806 A 1 HETATM 3 C C2 GOL . . . H 2 -18.573 23.021 47.357 1 69.79 ? C2 GOL 806 A 1 HETATM 4 O O2 GOL . . . H 2 -18.333 23.606 46.073 1 70.19 ? O2 GOL 806 A 1 HETATM 5 C C3 GOL . . . H 2 -17.401 22.135 47.791 1 72.31 ? C3 GOL 806 A 1 HETATM 6 O O3 GOL . . . H 2 -17.338 20.926 47.013 1 71.12 ? O3 GOL 806 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #