data_4EG6 # _model_server_result.job_id C-oJC5A4jtGH4c_Ni2lhPg _model_server_result.datetime_utc '2024-12-18 04:13:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eg6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 4EG6 # _exptl.entry_id 4EG6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EG6 _cell.length_a 86.638 _cell.length_b 105.629 _cell.length_c 207.439 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Z 1 1 B,Q,R,S,T,U,V,W,X,Y,AA 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 O N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 U N N ? 2 W N N ? 2 X N N ? 2 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 238 A HIS 469 1_555 A N CAS 239 A CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C CAS 239 A CAS 470 1_555 A N VAL 240 A VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C HIS 238 B HIS 469 1_555 B N CAS 239 B CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C CAS 239 B CAS 470 1_555 B N VAL 240 B VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 219 n n C1 C2 GOL sing 220 n n C1 H11 GOL sing 221 n n C1 H12 GOL sing 222 n n O1 HO1 GOL sing 223 n n C2 O2 GOL sing 224 n n C2 C3 GOL sing 225 n n C2 H2 GOL sing 226 n n O2 HO2 GOL sing 227 n n C3 O3 GOL sing 228 n n C3 H31 GOL sing 229 n n C3 H32 GOL sing 230 n n O3 HO3 GOL sing 231 n n # _atom_sites.entry_id 4EG6 _atom_sites.fract_transf_matrix[1][1] 0.011542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 801 900 GOL GOL . D 2 GOL A 1 802 901 GOL GOL . E 2 GOL A 1 803 902 GOL GOL . F 2 GOL A 1 804 903 GOL GOL . G 2 GOL A 1 805 905 GOL GOL . H 2 GOL A 1 806 908 GOL GOL . I 2 GOL A 1 807 910 GOL GOL . J 3 DMS A 1 808 911 DMS DMS . K 3 DMS A 1 809 912 DMS DMS . L 3 DMS A 1 810 913 DMS DMS . M 3 DMS A 1 811 914 DMS DMS . N 3 DMS A 1 812 915 DMS DMS . O 2 GOL A 1 813 900 GOL GOL . P 4 MET A 1 814 800 MET MET . Q 2 GOL B 1 901 901 GOL GOL . R 2 GOL B 1 902 902 GOL GOL . S 2 GOL B 1 903 903 GOL GOL . T 5 SO4 B 1 904 909 SO4 SO4 . U 2 GOL B 1 905 905 GOL GOL . V 6 0P5 B 1 906 800 0P5 0P5 . W 2 GOL B 1 907 906 GOL GOL . X 2 GOL B 1 908 907 GOL GOL . Y 2 GOL B 1 909 908 GOL GOL . Z 7 HOH A 1 901 1000 HOH HOH . Z 7 HOH A 2 902 1001 HOH HOH . Z 7 HOH A 3 903 1002 HOH HOH . Z 7 HOH A 4 904 1003 HOH HOH . Z 7 HOH A 5 905 1004 HOH HOH . Z 7 HOH A 6 906 1005 HOH HOH . Z 7 HOH A 7 907 1006 HOH HOH . Z 7 HOH A 8 908 1008 HOH HOH . Z 7 HOH A 9 909 1009 HOH HOH . Z 7 HOH A 10 910 1010 HOH HOH . Z 7 HOH A 11 911 1011 HOH HOH . Z 7 HOH A 12 912 1012 HOH HOH . Z 7 HOH A 13 913 1013 HOH HOH . Z 7 HOH A 14 914 1014 HOH HOH . Z 7 HOH A 15 915 1015 HOH HOH . Z 7 HOH A 16 916 1016 HOH HOH . Z 7 HOH A 17 917 1017 HOH HOH . Z 7 HOH A 18 918 1018 HOH HOH . Z 7 HOH A 19 919 1019 HOH HOH . Z 7 HOH A 20 920 1020 HOH HOH . Z 7 HOH A 21 921 1021 HOH HOH . Z 7 HOH A 22 922 1022 HOH HOH . Z 7 HOH A 23 923 1023 HOH HOH . Z 7 HOH A 24 924 1024 HOH HOH . Z 7 HOH A 25 925 1025 HOH HOH . Z 7 HOH A 26 926 1026 HOH HOH . Z 7 HOH A 27 927 1027 HOH HOH . Z 7 HOH A 28 928 1028 HOH HOH . Z 7 HOH A 29 929 1029 HOH HOH . Z 7 HOH A 30 930 1030 HOH HOH . Z 7 HOH A 31 931 1031 HOH HOH . Z 7 HOH A 32 932 1032 HOH HOH . Z 7 HOH A 33 933 1033 HOH HOH . Z 7 HOH A 34 934 1034 HOH HOH . Z 7 HOH A 35 935 1035 HOH HOH . Z 7 HOH A 36 936 1036 HOH HOH . Z 7 HOH A 37 937 1037 HOH HOH . Z 7 HOH A 38 938 1038 HOH HOH . Z 7 HOH A 39 939 1039 HOH HOH . Z 7 HOH A 40 940 1040 HOH HOH . Z 7 HOH A 41 941 1041 HOH HOH . Z 7 HOH A 42 942 1042 HOH HOH . Z 7 HOH A 43 943 1043 HOH HOH . Z 7 HOH A 44 944 1044 HOH HOH . Z 7 HOH A 45 945 1045 HOH HOH . Z 7 HOH A 46 946 1046 HOH HOH . Z 7 HOH A 47 947 1047 HOH HOH . Z 7 HOH A 48 948 1048 HOH HOH . Z 7 HOH A 49 949 1049 HOH HOH . Z 7 HOH A 50 950 1050 HOH HOH . Z 7 HOH A 51 951 1051 HOH HOH . Z 7 HOH A 52 952 1052 HOH HOH . Z 7 HOH A 53 953 1053 HOH HOH . Z 7 HOH A 54 954 1054 HOH HOH . Z 7 HOH A 55 955 1055 HOH HOH . Z 7 HOH A 56 956 1056 HOH HOH . Z 7 HOH A 57 957 1057 HOH HOH . Z 7 HOH A 58 958 1058 HOH HOH . Z 7 HOH A 59 959 1059 HOH HOH . Z 7 HOH A 60 960 1060 HOH HOH . Z 7 HOH A 61 961 1061 HOH HOH . Z 7 HOH A 62 962 1062 HOH HOH . Z 7 HOH A 63 963 1063 HOH HOH . Z 7 HOH A 64 964 1064 HOH HOH . Z 7 HOH A 65 965 1065 HOH HOH . Z 7 HOH A 66 966 1066 HOH HOH . Z 7 HOH A 67 967 1067 HOH HOH . Z 7 HOH A 68 968 1068 HOH HOH . Z 7 HOH A 69 969 1069 HOH HOH . Z 7 HOH A 70 970 1070 HOH HOH . Z 7 HOH A 71 971 1071 HOH HOH . Z 7 HOH A 72 972 1072 HOH HOH . Z 7 HOH A 73 973 1073 HOH HOH . Z 7 HOH A 74 974 1074 HOH HOH . Z 7 HOH A 75 975 1075 HOH HOH . Z 7 HOH A 76 976 1076 HOH HOH . Z 7 HOH A 77 977 1077 HOH HOH . Z 7 HOH A 78 978 1078 HOH HOH . Z 7 HOH A 79 979 1079 HOH HOH . Z 7 HOH A 80 980 1080 HOH HOH . Z 7 HOH A 81 981 1081 HOH HOH . Z 7 HOH A 82 982 1082 HOH HOH . Z 7 HOH A 83 983 1083 HOH HOH . Z 7 HOH A 84 984 1084 HOH HOH . Z 7 HOH A 85 985 1085 HOH HOH . Z 7 HOH A 86 986 1086 HOH HOH . Z 7 HOH A 87 987 1087 HOH HOH . Z 7 HOH A 88 988 1088 HOH HOH . Z 7 HOH A 89 989 1089 HOH HOH . Z 7 HOH A 90 990 1090 HOH HOH . Z 7 HOH A 91 991 1091 HOH HOH . Z 7 HOH A 92 992 1092 HOH HOH . Z 7 HOH A 93 993 1093 HOH HOH . Z 7 HOH A 94 994 1094 HOH HOH . Z 7 HOH A 95 995 1095 HOH HOH . Z 7 HOH A 96 996 1096 HOH HOH . Z 7 HOH A 97 997 1098 HOH HOH . Z 7 HOH A 98 998 1099 HOH HOH . Z 7 HOH A 99 999 1100 HOH HOH . Z 7 HOH A 100 1000 1101 HOH HOH . Z 7 HOH A 101 1001 1102 HOH HOH . Z 7 HOH A 102 1002 1103 HOH HOH . Z 7 HOH A 103 1003 1104 HOH HOH . Z 7 HOH A 104 1004 1105 HOH HOH . Z 7 HOH A 105 1005 1108 HOH HOH . AA 7 HOH B 1 1001 1097 HOH HOH . AA 7 HOH B 2 1002 1106 HOH HOH . AA 7 HOH B 3 1003 1000 HOH HOH . AA 7 HOH B 4 1004 1001 HOH HOH . AA 7 HOH B 5 1005 1002 HOH HOH . AA 7 HOH B 6 1006 1003 HOH HOH . AA 7 HOH B 7 1007 1004 HOH HOH . AA 7 HOH B 8 1008 1005 HOH HOH . AA 7 HOH B 9 1009 1006 HOH HOH . AA 7 HOH B 10 1010 1007 HOH HOH . AA 7 HOH B 11 1011 1008 HOH HOH . AA 7 HOH B 12 1012 1009 HOH HOH . AA 7 HOH B 13 1013 1010 HOH HOH . AA 7 HOH B 14 1014 1011 HOH HOH . AA 7 HOH B 15 1015 1012 HOH HOH . AA 7 HOH B 16 1016 1013 HOH HOH . AA 7 HOH B 17 1017 1014 HOH HOH . AA 7 HOH B 18 1018 1015 HOH HOH . AA 7 HOH B 19 1019 1016 HOH HOH . AA 7 HOH B 20 1020 1017 HOH HOH . AA 7 HOH B 21 1021 1018 HOH HOH . AA 7 HOH B 22 1022 1019 HOH HOH . AA 7 HOH B 23 1023 1020 HOH HOH . AA 7 HOH B 24 1024 1021 HOH HOH . AA 7 HOH B 25 1025 1022 HOH HOH . AA 7 HOH B 26 1026 1023 HOH HOH . AA 7 HOH B 27 1027 1024 HOH HOH . AA 7 HOH B 28 1028 1025 HOH HOH . AA 7 HOH B 29 1029 1026 HOH HOH . AA 7 HOH B 30 1030 1027 HOH HOH . AA 7 HOH B 31 1031 1028 HOH HOH . AA 7 HOH B 32 1032 1029 HOH HOH . AA 7 HOH B 33 1033 1030 HOH HOH . AA 7 HOH B 34 1034 1031 HOH HOH . AA 7 HOH B 35 1035 1032 HOH HOH . AA 7 HOH B 36 1036 1033 HOH HOH . AA 7 HOH B 37 1037 1034 HOH HOH . AA 7 HOH B 38 1038 1035 HOH HOH . AA 7 HOH B 39 1039 1036 HOH HOH . AA 7 HOH B 40 1040 1037 HOH HOH . AA 7 HOH B 41 1041 1038 HOH HOH . AA 7 HOH B 42 1042 1039 HOH HOH . AA 7 HOH B 43 1043 1040 HOH HOH . AA 7 HOH B 44 1044 1041 HOH HOH . AA 7 HOH B 45 1045 1042 HOH HOH . AA 7 HOH B 46 1046 1043 HOH HOH . AA 7 HOH B 47 1047 1044 HOH HOH . AA 7 HOH B 48 1048 1045 HOH HOH . AA 7 HOH B 49 1049 1046 HOH HOH . AA 7 HOH B 50 1050 1047 HOH HOH . AA 7 HOH B 51 1051 1048 HOH HOH . AA 7 HOH B 52 1052 1049 HOH HOH . AA 7 HOH B 53 1053 1050 HOH HOH . AA 7 HOH B 54 1054 1051 HOH HOH . AA 7 HOH B 55 1055 1052 HOH HOH . AA 7 HOH B 56 1056 1053 HOH HOH . AA 7 HOH B 57 1057 1054 HOH HOH . AA 7 HOH B 58 1058 1055 HOH HOH . AA 7 HOH B 59 1059 1056 HOH HOH . AA 7 HOH B 60 1060 1057 HOH HOH . AA 7 HOH B 61 1061 1058 HOH HOH . AA 7 HOH B 62 1062 1059 HOH HOH . AA 7 HOH B 63 1063 1060 HOH HOH . AA 7 HOH B 64 1064 1061 HOH HOH . AA 7 HOH B 65 1065 1062 HOH HOH . AA 7 HOH B 66 1066 1063 HOH HOH . AA 7 HOH B 67 1067 1064 HOH HOH . AA 7 HOH B 68 1068 1065 HOH HOH . AA 7 HOH B 69 1069 1066 HOH HOH . AA 7 HOH B 70 1070 1067 HOH HOH . AA 7 HOH B 71 1071 1068 HOH HOH . AA 7 HOH B 72 1072 1069 HOH HOH . AA 7 HOH B 73 1073 1070 HOH HOH . AA 7 HOH B 74 1074 1071 HOH HOH . AA 7 HOH B 75 1075 1072 HOH HOH . AA 7 HOH B 76 1076 1073 HOH HOH . AA 7 HOH B 77 1077 1074 HOH HOH . AA 7 HOH B 78 1078 1075 HOH HOH . AA 7 HOH B 79 1079 1076 HOH HOH . AA 7 HOH B 80 1080 1077 HOH HOH . AA 7 HOH B 81 1081 1078 HOH HOH . AA 7 HOH B 82 1082 1079 HOH HOH . AA 7 HOH B 83 1083 1080 HOH HOH . AA 7 HOH B 84 1084 1081 HOH HOH . AA 7 HOH B 85 1085 1082 HOH HOH . AA 7 HOH B 86 1086 1083 HOH HOH . AA 7 HOH B 87 1087 1084 HOH HOH . AA 7 HOH B 88 1088 1085 HOH HOH . AA 7 HOH B 89 1089 1086 HOH HOH . AA 7 HOH B 90 1090 1087 HOH HOH . AA 7 HOH B 91 1091 1088 HOH HOH . AA 7 HOH B 92 1092 1089 HOH HOH . AA 7 HOH B 93 1093 1090 HOH HOH . AA 7 HOH B 94 1094 1091 HOH HOH . AA 7 HOH B 95 1095 1092 HOH HOH . AA 7 HOH B 96 1096 1093 HOH HOH . AA 7 HOH B 97 1097 1094 HOH HOH . AA 7 HOH B 98 1098 1095 HOH HOH . AA 7 HOH B 99 1099 1096 HOH HOH . AA 7 HOH B 100 1100 1097 HOH HOH . AA 7 HOH B 101 1101 1098 HOH HOH . AA 7 HOH B 102 1102 1099 HOH HOH . AA 7 HOH B 103 1103 1100 HOH HOH . AA 7 HOH B 104 1104 1101 HOH HOH . AA 7 HOH B 105 1105 1102 HOH HOH . AA 7 HOH B 106 1106 1103 HOH HOH . AA 7 HOH B 107 1107 1104 HOH HOH . AA 7 HOH B 108 1108 1105 HOH HOH . AA 7 HOH B 109 1109 1106 HOH HOH . AA 7 HOH B 110 1110 1107 HOH HOH . AA 7 HOH B 111 1111 1108 HOH HOH . AA 7 HOH B 112 1112 1109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 17.39 17.175 64.113 1 52.78 ? C1 GOL 802 A 1 HETATM 2 O O1 GOL . . . D 2 18.094 18.276 63.525 1 53.36 ? O1 GOL 802 A 1 HETATM 3 C C2 GOL . . . D 2 16.02 17.627 64.617 1 51.45 ? C2 GOL 802 A 1 HETATM 4 O O2 GOL . . . D 2 16.181 18.59 65.652 1 52.94 ? O2 GOL 802 A 1 HETATM 5 C C3 GOL . . . D 2 15.186 18.257 63.507 1 50.28 ? C3 GOL 802 A 1 HETATM 6 O O3 GOL . . . D 2 14.451 17.232 62.835 1 51.03 ? O3 GOL 802 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 131 _model_server_stats.create_model_time_ms 194 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #