data_4EGP
#
_model_server_result.job_id            2XI4u1Z_xTmyFs_jpVEA0w 
_model_server_result.datetime_utc      '2024-10-19 11:44:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4egp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":501}' 
#
_entry.id    4EGP 
#
_exptl.entry_id    4EGP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EGP 
_cell.length_a            143.545 
_cell.length_b            172.21 
_cell.length_c            106.258 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EGP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,M 1 1 
B,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 359 A CYS 358 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc2 B SG CYS 359 B CYS 358 1_555 J FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 164 n n 
CHA C4D HEM doub 165 n n 
CHA HHA HEM sing 166 n n 
CHB C4A HEM sing 167 n n 
CHB C1B HEM doub 168 n n 
CHB HHB HEM sing 169 n n 
CHC C4B HEM sing 170 n n 
CHC C1C HEM doub 171 n n 
CHC HHC HEM sing 172 n n 
CHD C4C HEM doub 173 n n 
CHD C1D HEM sing 174 n n 
CHD HHD HEM sing 175 n n 
C1A C2A HEM doub 176 n y 
C1A NA HEM sing 177 n y 
C2A C3A HEM sing 178 n y 
C2A CAA HEM sing 179 n n 
C3A C4A HEM doub 180 n y 
C3A CMA HEM sing 181 n n 
C4A NA HEM sing 182 n y 
CMA HMA HEM sing 183 n n 
CMA HMAA HEM sing 184 n n 
CMA HMAB HEM sing 185 n n 
CAA CBA HEM sing 186 n n 
CAA HAA HEM sing 187 n n 
CAA HAAA HEM sing 188 n n 
CBA CGA HEM sing 189 n n 
CBA HBA HEM sing 190 n n 
CBA HBAA HEM sing 191 n n 
CGA O1A HEM doub 192 n n 
CGA O2A HEM sing 193 n n 
C1B C2B HEM sing 194 n n 
C1B NB HEM sing 195 n n 
C2B C3B HEM doub 196 n n 
C2B CMB HEM sing 197 n n 
C3B C4B HEM sing 198 n n 
C3B CAB HEM sing 199 n n 
C4B NB HEM doub 200 n n 
CMB HMB HEM sing 201 n n 
CMB HMBA HEM sing 202 n n 
CMB HMBB HEM sing 203 n n 
CAB CBB HEM doub 204 n n 
CAB HAB HEM sing 205 n n 
CBB HBB HEM sing 206 n n 
CBB HBBA HEM sing 207 n n 
C1C C2C HEM sing 208 n y 
C1C NC HEM sing 209 n y 
C2C C3C HEM doub 210 n y 
C2C CMC HEM sing 211 n n 
C3C C4C HEM sing 212 n y 
C3C CAC HEM sing 213 n n 
C4C NC HEM sing 214 n y 
CMC HMC HEM sing 215 n n 
CMC HMCA HEM sing 216 n n 
CMC HMCB HEM sing 217 n n 
CAC CBC HEM doub 218 n n 
CAC HAC HEM sing 219 n n 
CBC HBC HEM sing 220 n n 
CBC HBCA HEM sing 221 n n 
C1D C2D HEM sing 222 n n 
C1D ND HEM doub 223 n n 
C2D C3D HEM doub 224 n n 
C2D CMD HEM sing 225 n n 
C3D C4D HEM sing 226 n n 
C3D CAD HEM sing 227 n n 
C4D ND HEM sing 228 n n 
CMD HMD HEM sing 229 n n 
CMD HMDA HEM sing 230 n n 
CMD HMDB HEM sing 231 n n 
CAD CBD HEM sing 232 n n 
CAD HAD HEM sing 233 n n 
CAD HADA HEM sing 234 n n 
CBD CGD HEM sing 235 n n 
CBD HBD HEM sing 236 n n 
CBD HBDA HEM sing 237 n n 
CGD O1D HEM doub 238 n n 
CGD O2D HEM sing 239 n n 
O2A H2A HEM sing 240 n n 
O2D H2D HEM sing 241 n n 
FE NA HEM sing 242 n n 
FE NB HEM sing 243 n n 
FE NC HEM sing 244 n n 
FE ND HEM sing 245 n n 
#
_atom_sites.entry_id                     4EGP 
_atom_sites.fract_transf_matrix[1][1]    0.006966 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009411 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 501 430 HEM HEM . 
D 3 FIV A 1 502 555 FIV FIV . 
E 3 FIV A 1 503 2555 FIV FIV . 
F 4 SO4 A 1 504 501 SO4 SO4 . 
G 4 SO4 A 1 505 502 SO4 SO4 . 
H 5 GOL A 1 506 601 GOL GOL . 
I 6 CL A 1 507 701 CL CL . 
J 2 HEM B 1 501 430 HEM HEM . 
K 3 FIV B 1 502 555 FIV FIV . 
L 4 SO4 B 1 503 501 SO4 SO4 . 
M 7 HOH A 1 601 2 HOH HOH . 
M 7 HOH A 2 602 3 HOH HOH . 
M 7 HOH A 3 603 5 HOH HOH . 
M 7 HOH A 4 604 6 HOH HOH . 
M 7 HOH A 5 605 7 HOH HOH . 
M 7 HOH A 6 606 8 HOH HOH . 
M 7 HOH A 7 607 12 HOH HOH . 
M 7 HOH A 8 608 13 HOH HOH . 
M 7 HOH A 9 609 14 HOH HOH . 
M 7 HOH A 10 610 17 HOH HOH . 
M 7 HOH A 11 611 18 HOH HOH . 
N 7 HOH B 1 601 1 HOH HOH . 
N 7 HOH B 2 602 4 HOH HOH . 
N 7 HOH B 3 603 9 HOH HOH . 
N 7 HOH B 4 604 10 HOH HOH . 
N 7 HOH B 5 605 11 HOH HOH . 
N 7 HOH B 6 606 15 HOH HOH . 
N 7 HOH B 7 607 16 HOH HOH . 
N 7 HOH B 8 608 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . J 2 -25.439 43.846 -9.42 1 56.58 ? CHA HEM 501 B 1 
HETATM 2 C CHB HEM . . . J 2 -21.423 44.373 -11.993 1 57.37 ? CHB HEM 501 B 1 
HETATM 3 C CHC HEM . . . J 2 -24.121 44.424 -15.998 1 57.71 ? CHC HEM 501 B 1 
HETATM 4 C CHD HEM . . . J 2 -27.886 45.622 -13.243 1 56.97 ? CHD HEM 501 B 1 
HETATM 5 C C1A HEM . . . J 2 -24.107 43.838 -9.778 1 56.15 ? C1A HEM 501 B 1 
HETATM 6 C C2A HEM . . . J 2 -22.997 43.462 -8.919 1 54.2 ? C2A HEM 501 B 1 
HETATM 7 C C3A HEM . . . J 2 -21.889 43.595 -9.636 1 54.66 ? C3A HEM 501 B 1 
HETATM 8 C C4A HEM . . . J 2 -22.258 44.083 -10.953 1 55.61 ? C4A HEM 501 B 1 
HETATM 9 C CMA HEM . . . J 2 -20.472 43.279 -9.132 1 54.66 ? CMA HEM 501 B 1 
HETATM 10 C CAA HEM . . . J 2 -23.088 42.954 -7.462 1 51.46 ? CAA HEM 501 B 1 
HETATM 11 C CBA HEM . . . J 2 -23.327 44.069 -6.46 1 49.49 ? CBA HEM 501 B 1 
HETATM 12 C CGA HEM . . . J 2 -23.312 43.471 -5.075 1 49.46 ? CGA HEM 501 B 1 
HETATM 13 O O1A HEM . . . J 2 -23.332 44.191 -4.039 1 49.1 ? O1A HEM 501 B 1 
HETATM 14 O O2A HEM . . . J 2 -23.292 42.225 -5 1 50.3 ? O2A HEM 501 B 1 
HETATM 15 C C1B HEM . . . J 2 -21.799 44.396 -13.314 1 58.6 ? C1B HEM 501 B 1 
HETATM 16 C C2B HEM . . . J 2 -20.91 44.401 -14.461 1 59.02 ? C2B HEM 501 B 1 
HETATM 17 C C3B HEM . . . J 2 -21.653 44.419 -15.571 1 58.7 ? C3B HEM 501 B 1 
HETATM 18 C C4B HEM . . . J 2 -23.038 44.421 -15.162 1 58.15 ? C4B HEM 501 B 1 
HETATM 19 C CMB HEM . . . J 2 -19.372 44.374 -14.378 1 59.55 ? CMB HEM 501 B 1 
HETATM 20 C CAB HEM . . . J 2 -21.147 44.409 -17.027 1 58.86 ? CAB HEM 501 B 1 
HETATM 21 C CBB HEM . . . J 2 -20.315 45.354 -17.459 1 58.52 ? CBB HEM 501 B 1 
HETATM 22 C C1C HEM . . . J 2 -25.374 44.791 -15.607 1 57.38 ? C1C HEM 501 B 1 
HETATM 23 C C2C HEM . . . J 2 -26.46 45.074 -16.492 1 57.44 ? C2C HEM 501 B 1 
HETATM 24 C C3C HEM . . . J 2 -27.506 45.412 -15.738 1 58.01 ? C3C HEM 501 B 1 
HETATM 25 C C4C HEM . . . J 2 -27.111 45.341 -14.345 1 57.61 ? C4C HEM 501 B 1 
HETATM 26 C CMC HEM . . . J 2 -26.359 44.987 -18.03 1 57.64 ? CMC HEM 501 B 1 
HETATM 27 C CAC HEM . . . J 2 -28.908 45.809 -16.234 1 59.48 ? CAC HEM 501 B 1 
HETATM 28 C CBC HEM . . . J 2 -29.588 44.988 -17.041 1 60.81 ? CBC HEM 501 B 1 
HETATM 29 C C1D HEM . . . J 2 -27.611 45.225 -11.962 1 56.7 ? C1D HEM 501 B 1 
HETATM 30 C C2D HEM . . . J 2 -28.532 45.251 -10.847 1 57.24 ? C2D HEM 501 B 1 
HETATM 31 C C3D HEM . . . J 2 -27.758 44.684 -9.651 1 57.03 ? C3D HEM 501 B 1 
HETATM 32 C C4D HEM . . . J 2 -26.455 44.38 -10.165 1 56.51 ? C4D HEM 501 B 1 
HETATM 33 C CMD HEM . . . J 2 -29.991 45.725 -10.819 1 55.85 ? CMD HEM 501 B 1 
HETATM 34 C CAD HEM . . . J 2 -28.267 44.49 -8.211 1 56.82 ? CAD HEM 501 B 1 
HETATM 35 C CBD HEM . . . J 2 -28.684 43.04 -8.006 1 56.8 ? CBD HEM 501 B 1 
HETATM 36 C CGD HEM . . . J 2 -29.01 42.73 -6.556 1 56.67 ? CGD HEM 501 B 1 
HETATM 37 O O1D HEM . . . J 2 -29.508 41.6 -6.32 1 58.1 ? O1D HEM 501 B 1 
HETATM 38 O O2D HEM . . . J 2 -28.789 43.566 -5.638 1 54.65 ? O2D HEM 501 B 1 
HETATM 39 N NA HEM . . . J 2 -23.615 44.227 -11.012 1 55.71 ? NA HEM 501 B 1 
HETATM 40 N NB HEM . . . J 2 -23.093 44.416 -13.776 1 57.82 ? NB HEM 501 B 1 
HETATM 41 N NC HEM . . . J 2 -25.796 44.958 -14.305 1 57.17 ? NC HEM 501 B 1 
HETATM 42 N ND HEM . . . J 2 -26.397 44.724 -11.514 1 56.6 ? ND HEM 501 B 1 
HETATM 43 FE FE HEM . . . J 2 -24.709 44.545 -12.625 1 55.69 ? FE HEM 501 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#