data_4EH9 # _model_server_result.job_id cvLoo9V-SOUs-34rlb6ZSg _model_server_result.datetime_utc '2024-12-04 16:49:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eh9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4EH9 # _exptl.entry_id 4EH9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.346 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,5S)-3-[4-(trifluoromethyl)benzoyl]-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EH9 _cell.length_a 65.62 _cell.length_b 74.92 _cell.length_c 78.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EH9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H17 F3 N2 O2' _chem_comp.formula_weight 362.346 _chem_comp.id 0OQ _chem_comp.mon_nstd_flag . _chem_comp.name (1R,5S)-3-[4-(trifluoromethyl)benzoyl]-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAD CAZ 0OQ sing 1 n n OAA CAQ 0OQ doub 2 n n OAB CAU 0OQ doub 3 n n FAC CAZ 0OQ sing 4 n n CAZ CAS 0OQ sing 5 n n CAZ FAE 0OQ sing 6 n n CAK CAI 0OQ doub 7 n y CAK CAS 0OQ sing 8 n y CAI CAR 0OQ sing 9 n y CAS CAJ 0OQ doub 10 n y CAJ CAH 0OQ sing 11 n y CAH CAR 0OQ doub 12 n y CAQ CAR 0OQ sing 13 n n CAQ NAX 0OQ sing 14 n n CAU CAL 0OQ sing 15 n n CAU NAY 0OQ sing 16 n n CAL CAF 0OQ doub 17 n n CAP NAY 0OQ sing 18 n n CAP CAV 0OQ sing 19 n n CAN NAX 0OQ sing 20 n n CAN CAV 0OQ sing 21 n n NAX CAO 0OQ sing 22 n n NAY CAT 0OQ sing 23 n n CAF CAG 0OQ sing 24 n n CAV CAM 0OQ sing 25 n n CAT CAG 0OQ doub 26 n n CAT CAW 0OQ sing 27 n n CAO CAW 0OQ sing 28 n n CAW CAM 0OQ sing 29 n n CAL H1 0OQ sing 30 n n CAF H2 0OQ sing 31 n n CAG H3 0OQ sing 32 n n CAP H4 0OQ sing 33 n n CAP H5 0OQ sing 34 n n CAV H6 0OQ sing 35 n n CAN H7 0OQ sing 36 n n CAN H8 0OQ sing 37 n n CAM H9 0OQ sing 38 n n CAM H10 0OQ sing 39 n n CAW H11 0OQ sing 40 n n CAO H12 0OQ sing 41 n n CAO H13 0OQ sing 42 n n CAH H14 0OQ sing 43 n n CAJ H15 0OQ sing 44 n n CAK H16 0OQ sing 45 n n CAI H17 0OQ sing 46 n n # _atom_sites.entry_id 4EH9 _atom_sites.fract_transf_matrix[1][1] 0.015239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IRG A 1 401 1 IRG MGD . C 3 0OQ A 1 402 1 0OQ DRG . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 5 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 7 HOH HOH . D 4 HOH A 8 508 8 HOH HOH . D 4 HOH A 9 509 9 HOH HOH . D 4 HOH A 10 510 10 HOH HOH . D 4 HOH A 11 511 11 HOH HOH . D 4 HOH A 12 512 12 HOH HOH . D 4 HOH A 13 513 13 HOH HOH . D 4 HOH A 14 514 14 HOH HOH . D 4 HOH A 15 515 15 HOH HOH . D 4 HOH A 16 516 18 HOH HOH . D 4 HOH A 17 517 19 HOH HOH . D 4 HOH A 18 518 20 HOH HOH . D 4 HOH A 19 519 21 HOH HOH . D 4 HOH A 20 520 22 HOH HOH . D 4 HOH A 21 521 23 HOH HOH . D 4 HOH A 22 522 24 HOH HOH . D 4 HOH A 23 523 25 HOH HOH . D 4 HOH A 24 524 26 HOH HOH . D 4 HOH A 25 525 27 HOH HOH . D 4 HOH A 26 526 28 HOH HOH . D 4 HOH A 27 527 29 HOH HOH . D 4 HOH A 28 528 30 HOH HOH . D 4 HOH A 29 529 31 HOH HOH . D 4 HOH A 30 530 32 HOH HOH . D 4 HOH A 31 531 33 HOH HOH . D 4 HOH A 32 532 34 HOH HOH . D 4 HOH A 33 533 35 HOH HOH . D 4 HOH A 34 534 36 HOH HOH . D 4 HOH A 35 535 37 HOH HOH . D 4 HOH A 36 536 38 HOH HOH . D 4 HOH A 37 537 40 HOH HOH . D 4 HOH A 38 538 41 HOH HOH . D 4 HOH A 39 539 42 HOH HOH . D 4 HOH A 40 540 43 HOH HOH . D 4 HOH A 41 541 44 HOH HOH . D 4 HOH A 42 542 45 HOH HOH . D 4 HOH A 43 543 46 HOH HOH . D 4 HOH A 44 544 48 HOH HOH . D 4 HOH A 45 545 53 HOH HOH . D 4 HOH A 46 546 54 HOH HOH . D 4 HOH A 47 547 55 HOH HOH . D 4 HOH A 48 548 56 HOH HOH . D 4 HOH A 49 549 57 HOH HOH . D 4 HOH A 50 550 58 HOH HOH . D 4 HOH A 51 551 59 HOH HOH . D 4 HOH A 52 552 60 HOH HOH . D 4 HOH A 53 553 61 HOH HOH . D 4 HOH A 54 554 62 HOH HOH . D 4 HOH A 55 555 63 HOH HOH . D 4 HOH A 56 556 64 HOH HOH . D 4 HOH A 57 557 65 HOH HOH . D 4 HOH A 58 558 66 HOH HOH . D 4 HOH A 59 559 67 HOH HOH . D 4 HOH A 60 560 68 HOH HOH . D 4 HOH A 61 561 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAB 0OQ . . . C 3 -1.055 -11.771 11.688 0.9 48.77 ? OAB 0OQ 402 A 1 HETATM 2 C CAU 0OQ . . . C 3 -1.015 -10.87 12.533 0.9 48.81 ? CAU 0OQ 402 A 1 HETATM 3 C CAL 0OQ . . . C 3 0.13 -10.064 12.589 0.9 48.72 ? CAL 0OQ 402 A 1 HETATM 4 C CAF 0OQ . . . C 3 0.208 -9.046 13.537 0.9 47.42 ? CAF 0OQ 402 A 1 HETATM 5 C CAG 0OQ . . . C 3 -0.865 -8.866 14.411 0.9 48.06 ? CAG 0OQ 402 A 1 HETATM 6 C CAT 0OQ . . . C 3 -2.009 -9.68 14.344 0.9 47.77 ? CAT 0OQ 402 A 1 HETATM 7 N NAY 0OQ . . . C 3 -2.059 -10.675 13.389 0.9 48.25 ? NAY 0OQ 402 A 1 HETATM 8 C CAP 0OQ . . . C 3 -3.232 -11.611 13.246 0.9 48.54 ? CAP 0OQ 402 A 1 HETATM 9 C CAV 0OQ . . . C 3 -4.443 -11.203 14.1 0.9 48.3 ? CAV 0OQ 402 A 1 HETATM 10 C CAN 0OQ . . . C 3 -5.198 -10.105 13.322 0.9 48.26 ? CAN 0OQ 402 A 1 HETATM 11 C CAM 0OQ . . . C 3 -3.944 -10.683 15.474 0.9 48.55 ? CAM 0OQ 402 A 1 HETATM 12 C CAW 0OQ . . . C 3 -3.078 -9.408 15.266 0.9 47.6 ? CAW 0OQ 402 A 1 HETATM 13 C CAO 0OQ . . . C 3 -4.025 -8.299 14.7 0.9 47.13 ? CAO 0OQ 402 A 1 HETATM 14 N NAX 0OQ . . . C 3 -4.474 -8.783 13.358 0.9 48.23 ? NAX 0OQ 402 A 1 HETATM 15 C CAQ 0OQ . . . C 3 -4.112 -8.18 12.196 0.9 47.54 ? CAQ 0OQ 402 A 1 HETATM 16 O OAA 0OQ . . . C 3 -4.444 -8.659 11.111 0.9 43.84 ? OAA 0OQ 402 A 1 HETATM 17 C CAR 0OQ . . . C 3 -3.5 -6.909 12.197 0.9 48.09 ? CAR 0OQ 402 A 1 HETATM 18 C CAH 0OQ . . . C 3 -4.352 -5.792 12.194 0.9 48.07 ? CAH 0OQ 402 A 1 HETATM 19 C CAJ 0OQ . . . C 3 -3.864 -4.482 12.189 0.9 49.37 ? CAJ 0OQ 402 A 1 HETATM 20 C CAS 0OQ . . . C 3 -2.483 -4.257 12.173 0.9 51.02 ? CAS 0OQ 402 A 1 HETATM 21 C CAZ 0OQ . . . C 3 -2.004 -2.922 12.149 0.9 52.26 ? CAZ 0OQ 402 A 1 HETATM 22 F FAD 0OQ . . . C 3 -2.649 -2.226 11.076 0.9 53.24 ? FAD 0OQ 402 A 1 HETATM 23 F FAE 0OQ . . . C 3 -2.271 -2.252 13.341 0.9 53.89 ? FAE 0OQ 402 A 1 HETATM 24 F FAC 0OQ . . . C 3 -0.732 -2.873 11.958 0.9 51.83 ? FAC 0OQ 402 A 1 HETATM 25 C CAK 0OQ . . . C 3 -1.622 -5.376 12.152 0.9 50.66 ? CAK 0OQ 402 A 1 HETATM 26 C CAI 0OQ . . . C 3 -2.118 -6.696 12.168 0.9 48.38 ? CAI 0OQ 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #