data_4EHW # _model_server_result.job_id afGLKx42cxq5bVXuzaqy4g _model_server_result.datetime_utc '2024-10-19 16:38:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ehw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 4EHW # _exptl.entry_id 4EHW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EHW _cell.length_a 101.191 _cell.length_b 101.191 _cell.length_c 131.904 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EHW _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 J N N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 250 n n C1 H11 MPD sing 251 n n C1 H12 MPD sing 252 n n C1 H13 MPD sing 253 n n C2 O2 MPD sing 254 n n C2 CM MPD sing 255 n n C2 C3 MPD sing 256 n n O2 HO2 MPD sing 257 n n CM HM1 MPD sing 258 n n CM HM2 MPD sing 259 n n CM HM3 MPD sing 260 n n C3 C4 MPD sing 261 n n C3 H31 MPD sing 262 n n C3 H32 MPD sing 263 n n C4 O4 MPD sing 264 n n C4 C5 MPD sing 265 n n C4 H4 MPD sing 266 n n O4 HO4 MPD sing 267 n n C5 H51 MPD sing 268 n n C5 H52 MPD sing 269 n n C5 H53 MPD sing 270 n n # _atom_sites.entry_id 4EHW _atom_sites.fract_transf_matrix[1][1] 0.009882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007581 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 400 400 GOL GOL . C 2 GOL A 1 401 401 GOL GOL . D 3 MPD A 1 402 402 MPD MPD . E 3 MPD A 1 403 403 MPD MPD . F 2 GOL A 1 404 404 GOL GOL . G 3 MPD A 1 405 405 MPD MPD . H 2 GOL A 1 406 406 GOL GOL . I 2 GOL A 1 407 407 GOL GOL . J 3 MPD A 1 408 408 MPD MPD . K 2 GOL A 1 409 409 GOL GOL . L 4 HOH A 1 501 1 HOH HOH . L 4 HOH A 2 502 2 HOH HOH . L 4 HOH A 3 503 3 HOH HOH . L 4 HOH A 4 504 4 HOH HOH . L 4 HOH A 5 505 5 HOH HOH . L 4 HOH A 6 506 6 HOH HOH . L 4 HOH A 7 507 7 HOH HOH . L 4 HOH A 8 508 8 HOH HOH . L 4 HOH A 9 509 9 HOH HOH . L 4 HOH A 10 510 10 HOH HOH . L 4 HOH A 11 511 11 HOH HOH . L 4 HOH A 12 512 12 HOH HOH . L 4 HOH A 13 513 13 HOH HOH . L 4 HOH A 14 514 14 HOH HOH . L 4 HOH A 15 515 15 HOH HOH . L 4 HOH A 16 516 16 HOH HOH . L 4 HOH A 17 517 17 HOH HOH . L 4 HOH A 18 518 18 HOH HOH . L 4 HOH A 19 519 19 HOH HOH . L 4 HOH A 20 520 20 HOH HOH . L 4 HOH A 21 521 21 HOH HOH . L 4 HOH A 22 522 22 HOH HOH . L 4 HOH A 23 523 23 HOH HOH . L 4 HOH A 24 524 24 HOH HOH . L 4 HOH A 25 525 25 HOH HOH . L 4 HOH A 26 526 26 HOH HOH . L 4 HOH A 27 527 27 HOH HOH . L 4 HOH A 28 528 28 HOH HOH . L 4 HOH A 29 529 29 HOH HOH . L 4 HOH A 30 530 30 HOH HOH . L 4 HOH A 31 531 31 HOH HOH . L 4 HOH A 32 532 32 HOH HOH . L 4 HOH A 33 533 33 HOH HOH . L 4 HOH A 34 534 34 HOH HOH . L 4 HOH A 35 535 35 HOH HOH . L 4 HOH A 36 536 36 HOH HOH . L 4 HOH A 37 537 37 HOH HOH . L 4 HOH A 38 538 38 HOH HOH . L 4 HOH A 39 539 39 HOH HOH . L 4 HOH A 40 540 40 HOH HOH . L 4 HOH A 41 541 41 HOH HOH . L 4 HOH A 42 542 42 HOH HOH . L 4 HOH A 43 543 43 HOH HOH . L 4 HOH A 44 544 44 HOH HOH . L 4 HOH A 45 545 45 HOH HOH . L 4 HOH A 46 546 46 HOH HOH . L 4 HOH A 47 547 47 HOH HOH . L 4 HOH A 48 548 48 HOH HOH . L 4 HOH A 49 549 49 HOH HOH . L 4 HOH A 50 550 50 HOH HOH . L 4 HOH A 51 551 51 HOH HOH . L 4 HOH A 52 552 52 HOH HOH . L 4 HOH A 53 553 53 HOH HOH . L 4 HOH A 54 554 54 HOH HOH . L 4 HOH A 55 555 55 HOH HOH . L 4 HOH A 56 556 56 HOH HOH . L 4 HOH A 57 557 57 HOH HOH . L 4 HOH A 58 558 58 HOH HOH . L 4 HOH A 59 559 59 HOH HOH . L 4 HOH A 60 560 60 HOH HOH . L 4 HOH A 61 561 61 HOH HOH . L 4 HOH A 62 562 62 HOH HOH . L 4 HOH A 63 563 63 HOH HOH . L 4 HOH A 64 564 64 HOH HOH . L 4 HOH A 65 565 65 HOH HOH . L 4 HOH A 66 566 66 HOH HOH . L 4 HOH A 67 567 67 HOH HOH . L 4 HOH A 68 568 68 HOH HOH . L 4 HOH A 69 569 69 HOH HOH . L 4 HOH A 70 570 70 HOH HOH . L 4 HOH A 71 571 71 HOH HOH . L 4 HOH A 72 572 72 HOH HOH . L 4 HOH A 73 573 73 HOH HOH . L 4 HOH A 74 574 74 HOH HOH . L 4 HOH A 75 575 75 HOH HOH . L 4 HOH A 76 576 76 HOH HOH . L 4 HOH A 77 577 77 HOH HOH . L 4 HOH A 78 578 78 HOH HOH . L 4 HOH A 79 579 79 HOH HOH . L 4 HOH A 80 580 80 HOH HOH . L 4 HOH A 81 581 81 HOH HOH . L 4 HOH A 82 582 82 HOH HOH . L 4 HOH A 83 583 83 HOH HOH . L 4 HOH A 84 584 84 HOH HOH . L 4 HOH A 85 585 85 HOH HOH . L 4 HOH A 86 586 86 HOH HOH . L 4 HOH A 87 587 87 HOH HOH . L 4 HOH A 88 588 88 HOH HOH . L 4 HOH A 89 589 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . E 3 28.93 78.27 60.506 1 84.46 ? C1 MPD 403 A 1 HETATM 2 C C2 MPD . . . E 3 29.892 78.401 59.332 1 78.71 ? C2 MPD 403 A 1 HETATM 3 O O2 MPD . . . E 3 29.313 77.699 58.211 1 79.41 ? O2 MPD 403 A 1 HETATM 4 C CM MPD . . . E 3 30.082 79.877 58.971 1 75.22 ? CM MPD 403 A 1 HETATM 5 C C3 MPD . . . E 3 31.225 77.754 59.686 1 85.01 ? C3 MPD 403 A 1 HETATM 6 C C4 MPD . . . E 3 30.963 76.433 60.4 1 89.33 ? C4 MPD 403 A 1 HETATM 7 O O4 MPD . . . E 3 31.446 75.352 59.628 1 93.32 ? O4 MPD 403 A 1 HETATM 8 C C5 MPD . . . E 3 31.614 76.438 61.778 1 85.06 ? C5 MPD 403 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #