data_4EJ4 # _model_server_result.job_id Q7STyXnpzHyPjnhpRUCv9Q _model_server_result.datetime_utc '2024-11-23 03:53:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ej4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 4EJ4 # _exptl.entry_id 4EJ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.496 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4bS,8R,8aS,14bR)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano[1]benzofuro[2,3-a]pyrido[4,3-b]carbazole-1,8a(9H)-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4EJ4 _cell.length_a 73.278 _cell.length_b 73.278 _cell.length_c 266.653 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EJ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 86 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 121 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 163 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 198 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.04 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C26 H26 N2 O3' _chem_comp.formula_weight 414.496 _chem_comp.id EJ4 _chem_comp.mon_nstd_flag . _chem_comp.name (4bS,8R,8aS,14bR)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano[1]benzofuro[2,3-a]pyrido[4,3-b]carbazole-1,8a(9H)-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Naltrindole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAK CAL EJ4 doub 83 n y CAK CAJ EJ4 sing 84 n y CAL CAM EJ4 sing 85 n y CAJ CAI EJ4 doub 86 n y CAM NAN EJ4 sing 87 n y CAM CAH EJ4 doub 88 n y NAN CAF EJ4 sing 89 n y CAI CAH EJ4 sing 90 n y CAH CAG EJ4 sing 91 n y CAF CAG EJ4 doub 92 n y CAF CAE EJ4 sing 93 n n CAG CAO EJ4 sing 94 n n CAE OAD EJ4 sing 95 n n CAE CAV EJ4 sing 96 n n OAD CAC EJ4 sing 97 n n CAO CAP EJ4 sing 98 n n OAQ CAP EJ4 sing 99 n n CAP CAV EJ4 sing 100 n n CAP CAR EJ4 sing 101 n n CAV CAW EJ4 sing 102 n n CAV CAU EJ4 sing 103 n n CAC CAW EJ4 doub 104 n y CAC CAB EJ4 sing 105 n y OAA CAB EJ4 sing 106 n n CAW CAX EJ4 sing 107 n y CAU CAT EJ4 sing 108 n n CAB CAZ EJ4 doub 109 n y CAR CBA EJ4 sing 110 n n CAR NAS EJ4 sing 111 n n CAX CBA EJ4 sing 112 n n CAX CAY EJ4 doub 113 n y CAZ CAY EJ4 sing 114 n y NAS CAT EJ4 sing 115 n n NAS CBB EJ4 sing 116 n n CBB CBC EJ4 sing 117 n n CBD CBC EJ4 sing 118 n n CBD CBE EJ4 sing 119 n n CBC CBE EJ4 sing 120 n n CAE H1 EJ4 sing 121 n n CAI H2 EJ4 sing 122 n n CAJ H3 EJ4 sing 123 n n CAK H4 EJ4 sing 124 n n CAL H5 EJ4 sing 125 n n CAO H6 EJ4 sing 126 n n CAO H7 EJ4 sing 127 n n CAR H8 EJ4 sing 128 n n CAT H9 EJ4 sing 129 n n CAT H10 EJ4 sing 130 n n CAU H11 EJ4 sing 131 n n CAU H12 EJ4 sing 132 n n CAY H13 EJ4 sing 133 n n CAZ H14 EJ4 sing 134 n n NAN H15 EJ4 sing 135 n n OAA H17 EJ4 sing 136 n n OAQ H18 EJ4 sing 137 n n CBA H19 EJ4 sing 138 n n CBA H20 EJ4 sing 139 n n CBB H21 EJ4 sing 140 n n CBB H22 EJ4 sing 141 n n CBC H23 EJ4 sing 142 n n CBD H24 EJ4 sing 143 n n CBD H25 EJ4 sing 144 n n CBE H26 EJ4 sing 145 n n CBE H27 EJ4 sing 146 n n # _atom_sites.entry_id 4EJ4 _atom_sites.fract_transf_matrix[1][1] 0.013647 _atom_sites.fract_transf_matrix[1][2] 0.007879 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id EJ4 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 500 _pdbx_nonpoly_scheme.auth_seq_num 500 _pdbx_nonpoly_scheme.pdb_mon_id EJ4 _pdbx_nonpoly_scheme.auth_mon_id EJ4 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB EJ4 . . . B 2 61.261 38.391 -9.305 1 75.89 ? CAB EJ4 500 A 1 HETATM 2 C CAC EJ4 . . . B 2 62.139 39.252 -9.839 1 82.93 ? CAC EJ4 500 A 1 HETATM 3 C CAE EJ4 . . . B 2 63.322 40.553 -11.425 1 88.02 ? CAE EJ4 500 A 1 HETATM 4 C CAF EJ4 . . . B 2 62.28 40.944 -12.309 1 83.3 ? CAF EJ4 500 A 1 HETATM 5 C CAG EJ4 . . . B 2 61.53 42.063 -12.157 1 80.44 ? CAG EJ4 500 A 1 HETATM 6 C CAH EJ4 . . . B 2 60.705 42.174 -13.197 1 82.68 ? CAH EJ4 500 A 1 HETATM 7 C CAI EJ4 . . . B 2 59.725 43.045 -13.453 1 79.11 ? CAI EJ4 500 A 1 HETATM 8 C CAJ EJ4 . . . B 2 59.048 43.023 -14.664 1 70.98 ? CAJ EJ4 500 A 1 HETATM 9 C CAK EJ4 . . . B 2 59.424 42.068 -15.595 1 79.47 ? CAK EJ4 500 A 1 HETATM 10 C CAL EJ4 . . . B 2 60.452 41.185 -15.277 1 82.1 ? CAL EJ4 500 A 1 HETATM 11 C CAM EJ4 . . . B 2 61.065 41.256 -14.094 1 81.06 ? CAM EJ4 500 A 1 HETATM 12 C CAO EJ4 . . . B 2 61.507 42.651 -10.911 1 77.94 ? CAO EJ4 500 A 1 HETATM 13 C CAP EJ4 . . . B 2 62.847 42.511 -10.148 1 80.36 ? CAP EJ4 500 A 1 HETATM 14 C CAR EJ4 . . . B 2 62.718 43.149 -8.761 1 73.98 ? CAR EJ4 500 A 1 HETATM 15 C CAT EJ4 . . . B 2 64.009 41.198 -7.941 1 72.47 ? CAT EJ4 500 A 1 HETATM 16 C CAU EJ4 . . . B 2 64.18 40.665 -9.314 1 75.79 ? CAU EJ4 500 A 1 HETATM 17 C CAV EJ4 . . . B 2 62.951 41.137 -10.112 1 86.25 ? CAV EJ4 500 A 1 HETATM 18 C CAW EJ4 . . . B 2 61.899 40.494 -9.518 1 86.43 ? CAW EJ4 500 A 1 HETATM 19 C CAX EJ4 . . . B 2 61.216 40.991 -8.472 1 81.79 ? CAX EJ4 500 A 1 HETATM 20 C CAY EJ4 . . . B 2 60.335 40.124 -7.839 1 78.2 ? CAY EJ4 500 A 1 HETATM 21 C CAZ EJ4 . . . B 2 60.38 38.795 -8.288 1 74.8 ? CAZ EJ4 500 A 1 HETATM 22 N NAN EJ4 . . . B 2 62.055 40.539 -13.563 1 76.17 ? NAN EJ4 500 A 1 HETATM 23 N NAS EJ4 . . . B 2 63.928 42.675 -8.023 1 73.53 ? NAS EJ4 500 A 1 HETATM 24 O OAA EJ4 . . . B 2 61.32 37.101 -9.74 1 69.75 ? OAA EJ4 500 A 1 HETATM 25 O OAD EJ4 . . . B 2 62.974 39.18 -10.953 1 86.35 ? OAD EJ4 500 A 1 HETATM 26 O OAQ EJ4 . . . B 2 63.927 43.119 -10.881 1 80.64 ? OAQ EJ4 500 A 1 HETATM 27 C CBA EJ4 . . . B 2 61.355 42.426 -8.313 1 74.7 ? CBA EJ4 500 A 1 HETATM 28 C CBB EJ4 . . . B 2 63.766 42.95 -6.574 1 80.55 ? CBB EJ4 500 A 1 HETATM 29 C CBC EJ4 . . . B 2 63.802 44.435 -6.083 1 75.21 ? CBC EJ4 500 A 1 HETATM 30 C CBD EJ4 . . . B 2 62.801 45.52 -6.512 1 74.87 ? CBD EJ4 500 A 1 HETATM 31 C CBE EJ4 . . . B 2 62.666 44.853 -5.149 1 73.86 ? CBE EJ4 500 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 425 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #