data_4EJF # _model_server_result.job_id KCq8Hm4buU8zRuT-oCVfnw _model_server_result.datetime_utc '2024-11-25 18:26:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ejf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 4EJF # _exptl.entry_id 4EJF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.61 _cell.angle_gamma 90 _cell.entry_id 4EJF _cell.length_a 128.299 _cell.length_b 105.692 _cell.length_c 91.924 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EJF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 10 E CYS 42 1_555 F SG CYS 10 F CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 G SG CYS 10 G CYS 42 1_555 H SG CYS 10 H CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 4EJF _atom_sites.fract_transf_matrix[1][1] 0.007794 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002325 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009461 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PO4 C 1 301 1 PO4 PO4 . J 3 PO4 D 1 301 2 PO4 PO4 . K 4 HOH A 1 301 4 HOH HOH . K 4 HOH A 2 302 5 HOH HOH . K 4 HOH A 3 303 8 HOH HOH . K 4 HOH A 4 304 33 HOH HOH . K 4 HOH A 5 305 41 HOH HOH . K 4 HOH A 6 306 45 HOH HOH . K 4 HOH A 7 307 47 HOH HOH . K 4 HOH A 8 308 50 HOH HOH . K 4 HOH A 9 309 51 HOH HOH . K 4 HOH A 10 310 54 HOH HOH . K 4 HOH A 11 311 58 HOH HOH . K 4 HOH A 12 312 59 HOH HOH . K 4 HOH A 13 313 60 HOH HOH . K 4 HOH A 14 314 70 HOH HOH . K 4 HOH A 15 315 79 HOH HOH . K 4 HOH A 16 316 81 HOH HOH . K 4 HOH A 17 317 84 HOH HOH . K 4 HOH A 18 318 85 HOH HOH . K 4 HOH A 19 319 86 HOH HOH . K 4 HOH A 20 320 88 HOH HOH . K 4 HOH A 21 321 92 HOH HOH . K 4 HOH A 22 322 95 HOH HOH . K 4 HOH A 23 323 98 HOH HOH . K 4 HOH A 24 324 111 HOH HOH . K 4 HOH A 25 325 113 HOH HOH . K 4 HOH A 26 326 114 HOH HOH . K 4 HOH A 27 327 120 HOH HOH . K 4 HOH A 28 328 126 HOH HOH . K 4 HOH A 29 329 140 HOH HOH . K 4 HOH A 30 330 143 HOH HOH . K 4 HOH A 31 331 154 HOH HOH . K 4 HOH A 32 332 157 HOH HOH . K 4 HOH A 33 333 159 HOH HOH . K 4 HOH A 34 334 162 HOH HOH . K 4 HOH A 35 335 163 HOH HOH . K 4 HOH A 36 336 175 HOH HOH . K 4 HOH A 37 337 176 HOH HOH . K 4 HOH A 38 338 177 HOH HOH . K 4 HOH A 39 339 179 HOH HOH . K 4 HOH A 40 340 183 HOH HOH . K 4 HOH A 41 341 184 HOH HOH . K 4 HOH A 42 342 192 HOH HOH . K 4 HOH A 43 343 199 HOH HOH . K 4 HOH A 44 344 206 HOH HOH . K 4 HOH A 45 345 207 HOH HOH . K 4 HOH A 46 346 212 HOH HOH . K 4 HOH A 47 347 213 HOH HOH . K 4 HOH A 48 348 227 HOH HOH . K 4 HOH A 49 349 233 HOH HOH . K 4 HOH A 50 350 237 HOH HOH . K 4 HOH A 51 351 239 HOH HOH . K 4 HOH A 52 352 244 HOH HOH . K 4 HOH A 53 353 260 HOH HOH . K 4 HOH A 54 354 265 HOH HOH . K 4 HOH A 55 355 268 HOH HOH . K 4 HOH A 56 356 275 HOH HOH . K 4 HOH A 57 357 282 HOH HOH . K 4 HOH A 58 358 283 HOH HOH . K 4 HOH A 59 359 284 HOH HOH . K 4 HOH A 60 360 300 HOH HOH . K 4 HOH A 61 361 309 HOH HOH . K 4 HOH A 62 362 315 HOH HOH . K 4 HOH A 63 363 316 HOH HOH . K 4 HOH A 64 364 317 HOH HOH . K 4 HOH A 65 365 319 HOH HOH . L 4 HOH B 1 301 2 HOH HOH . L 4 HOH B 2 302 3 HOH HOH . L 4 HOH B 3 303 7 HOH HOH . L 4 HOH B 4 304 13 HOH HOH . L 4 HOH B 5 305 15 HOH HOH . L 4 HOH B 6 306 30 HOH HOH . L 4 HOH B 7 307 31 HOH HOH . L 4 HOH B 8 308 32 HOH HOH . L 4 HOH B 9 309 34 HOH HOH . L 4 HOH B 10 310 37 HOH HOH . L 4 HOH B 11 311 38 HOH HOH . L 4 HOH B 12 312 46 HOH HOH . L 4 HOH B 13 313 61 HOH HOH . L 4 HOH B 14 314 62 HOH HOH . L 4 HOH B 15 315 63 HOH HOH . L 4 HOH B 16 316 64 HOH HOH . L 4 HOH B 17 317 66 HOH HOH . L 4 HOH B 18 318 67 HOH HOH . L 4 HOH B 19 319 68 HOH HOH . L 4 HOH B 20 320 75 HOH HOH . L 4 HOH B 21 321 83 HOH HOH . L 4 HOH B 22 322 90 HOH HOH . L 4 HOH B 23 323 100 HOH HOH . L 4 HOH B 24 324 102 HOH HOH . L 4 HOH B 25 325 103 HOH HOH . L 4 HOH B 26 326 104 HOH HOH . L 4 HOH B 27 327 105 HOH HOH . L 4 HOH B 28 328 107 HOH HOH . L 4 HOH B 29 329 110 HOH HOH . L 4 HOH B 30 330 124 HOH HOH . L 4 HOH B 31 331 125 HOH HOH . L 4 HOH B 32 332 130 HOH HOH . L 4 HOH B 33 333 132 HOH HOH . L 4 HOH B 34 334 133 HOH HOH . L 4 HOH B 35 335 134 HOH HOH . L 4 HOH B 36 336 136 HOH HOH . L 4 HOH B 37 337 145 HOH HOH . L 4 HOH B 38 338 146 HOH HOH . L 4 HOH B 39 339 147 HOH HOH . L 4 HOH B 40 340 149 HOH HOH . L 4 HOH B 41 341 150 HOH HOH . L 4 HOH B 42 342 153 HOH HOH . L 4 HOH B 43 343 155 HOH HOH . L 4 HOH B 44 344 158 HOH HOH . L 4 HOH B 45 345 160 HOH HOH . L 4 HOH B 46 346 161 HOH HOH . L 4 HOH B 47 347 165 HOH HOH . L 4 HOH B 48 348 168 HOH HOH . L 4 HOH B 49 349 169 HOH HOH . L 4 HOH B 50 350 170 HOH HOH . L 4 HOH B 51 351 178 HOH HOH . L 4 HOH B 52 352 180 HOH HOH . L 4 HOH B 53 353 181 HOH HOH . L 4 HOH B 54 354 189 HOH HOH . L 4 HOH B 55 355 194 HOH HOH . L 4 HOH B 56 356 201 HOH HOH . L 4 HOH B 57 357 211 HOH HOH . L 4 HOH B 58 358 225 HOH HOH . L 4 HOH B 59 359 231 HOH HOH . L 4 HOH B 60 360 236 HOH HOH . L 4 HOH B 61 361 243 HOH HOH . L 4 HOH B 62 362 247 HOH HOH . L 4 HOH B 63 363 249 HOH HOH . L 4 HOH B 64 364 258 HOH HOH . L 4 HOH B 65 365 274 HOH HOH . L 4 HOH B 66 366 276 HOH HOH . L 4 HOH B 67 367 286 HOH HOH . L 4 HOH B 68 368 301 HOH HOH . L 4 HOH B 69 369 304 HOH HOH . L 4 HOH B 70 370 311 HOH HOH . L 4 HOH B 71 371 321 HOH HOH . L 4 HOH B 72 372 323 HOH HOH . M 4 HOH C 1 401 6 HOH HOH . M 4 HOH C 2 402 9 HOH HOH . M 4 HOH C 3 403 10 HOH HOH . M 4 HOH C 4 404 12 HOH HOH . M 4 HOH C 5 405 14 HOH HOH . M 4 HOH C 6 406 17 HOH HOH . M 4 HOH C 7 407 18 HOH HOH . M 4 HOH C 8 408 20 HOH HOH . M 4 HOH C 9 409 23 HOH HOH . M 4 HOH C 10 410 24 HOH HOH . M 4 HOH C 11 411 27 HOH HOH . M 4 HOH C 12 412 29 HOH HOH . M 4 HOH C 13 413 35 HOH HOH . M 4 HOH C 14 414 36 HOH HOH . M 4 HOH C 15 415 39 HOH HOH . M 4 HOH C 16 416 40 HOH HOH . M 4 HOH C 17 417 52 HOH HOH . M 4 HOH C 18 418 53 HOH HOH . M 4 HOH C 19 419 55 HOH HOH . M 4 HOH C 20 420 65 HOH HOH . M 4 HOH C 21 421 69 HOH HOH . M 4 HOH C 22 422 72 HOH HOH . M 4 HOH C 23 423 74 HOH HOH . M 4 HOH C 24 424 77 HOH HOH . M 4 HOH C 25 425 89 HOH HOH . M 4 HOH C 26 426 101 HOH HOH . M 4 HOH C 27 427 112 HOH HOH . M 4 HOH C 28 428 115 HOH HOH . M 4 HOH C 29 429 116 HOH HOH . M 4 HOH C 30 430 121 HOH HOH . M 4 HOH C 31 431 122 HOH HOH . M 4 HOH C 32 432 128 HOH HOH . M 4 HOH C 33 433 129 HOH HOH . M 4 HOH C 34 434 135 HOH HOH . M 4 HOH C 35 435 137 HOH HOH . M 4 HOH C 36 436 142 HOH HOH . M 4 HOH C 37 437 190 HOH HOH . M 4 HOH C 38 438 195 HOH HOH . M 4 HOH C 39 439 203 HOH HOH . M 4 HOH C 40 440 209 HOH HOH . M 4 HOH C 41 441 210 HOH HOH . M 4 HOH C 42 442 215 HOH HOH . M 4 HOH C 43 443 219 HOH HOH . M 4 HOH C 44 444 224 HOH HOH . M 4 HOH C 45 445 229 HOH HOH . M 4 HOH C 46 446 230 HOH HOH . M 4 HOH C 47 447 234 HOH HOH . M 4 HOH C 48 448 240 HOH HOH . M 4 HOH C 49 449 246 HOH HOH . M 4 HOH C 50 450 248 HOH HOH . M 4 HOH C 51 451 253 HOH HOH . M 4 HOH C 52 452 255 HOH HOH . M 4 HOH C 53 453 261 HOH HOH . M 4 HOH C 54 454 266 HOH HOH . M 4 HOH C 55 455 285 HOH HOH . M 4 HOH C 56 456 288 HOH HOH . M 4 HOH C 57 457 293 HOH HOH . M 4 HOH C 58 458 302 HOH HOH . M 4 HOH C 59 459 307 HOH HOH . M 4 HOH C 60 460 320 HOH HOH . M 4 HOH C 61 461 322 HOH HOH . N 4 HOH D 1 401 1 HOH HOH . N 4 HOH D 2 402 11 HOH HOH . N 4 HOH D 3 403 16 HOH HOH . N 4 HOH D 4 404 19 HOH HOH . N 4 HOH D 5 405 21 HOH HOH . N 4 HOH D 6 406 22 HOH HOH . N 4 HOH D 7 407 25 HOH HOH . N 4 HOH D 8 408 26 HOH HOH . N 4 HOH D 9 409 28 HOH HOH . N 4 HOH D 10 410 42 HOH HOH . N 4 HOH D 11 411 48 HOH HOH . N 4 HOH D 12 412 56 HOH HOH . N 4 HOH D 13 413 57 HOH HOH . N 4 HOH D 14 414 71 HOH HOH . N 4 HOH D 15 415 76 HOH HOH . N 4 HOH D 16 416 78 HOH HOH . N 4 HOH D 17 417 82 HOH HOH . N 4 HOH D 18 418 87 HOH HOH . N 4 HOH D 19 419 91 HOH HOH . N 4 HOH D 20 420 93 HOH HOH . N 4 HOH D 21 421 94 HOH HOH . N 4 HOH D 22 422 96 HOH HOH . N 4 HOH D 23 423 99 HOH HOH . N 4 HOH D 24 424 106 HOH HOH . N 4 HOH D 25 425 108 HOH HOH . N 4 HOH D 26 426 119 HOH HOH . N 4 HOH D 27 427 123 HOH HOH . N 4 HOH D 28 428 127 HOH HOH . N 4 HOH D 29 429 131 HOH HOH . N 4 HOH D 30 430 138 HOH HOH . N 4 HOH D 31 431 139 HOH HOH . N 4 HOH D 32 432 141 HOH HOH . N 4 HOH D 33 433 144 HOH HOH . N 4 HOH D 34 434 152 HOH HOH . N 4 HOH D 35 435 156 HOH HOH . N 4 HOH D 36 436 164 HOH HOH . N 4 HOH D 37 437 166 HOH HOH . N 4 HOH D 38 438 167 HOH HOH . N 4 HOH D 39 439 171 HOH HOH . N 4 HOH D 40 440 173 HOH HOH . N 4 HOH D 41 441 174 HOH HOH . N 4 HOH D 42 442 193 HOH HOH . N 4 HOH D 43 443 197 HOH HOH . N 4 HOH D 44 444 198 HOH HOH . N 4 HOH D 45 445 200 HOH HOH . N 4 HOH D 46 446 205 HOH HOH . N 4 HOH D 47 447 217 HOH HOH . N 4 HOH D 48 448 220 HOH HOH . N 4 HOH D 49 449 221 HOH HOH . N 4 HOH D 50 450 222 HOH HOH . N 4 HOH D 51 451 223 HOH HOH . N 4 HOH D 52 452 235 HOH HOH . N 4 HOH D 53 453 238 HOH HOH . N 4 HOH D 54 454 241 HOH HOH . N 4 HOH D 55 455 242 HOH HOH . N 4 HOH D 56 456 245 HOH HOH . N 4 HOH D 57 457 251 HOH HOH . N 4 HOH D 58 458 252 HOH HOH . N 4 HOH D 59 459 254 HOH HOH . N 4 HOH D 60 460 256 HOH HOH . N 4 HOH D 61 461 263 HOH HOH . N 4 HOH D 62 462 264 HOH HOH . N 4 HOH D 63 463 267 HOH HOH . N 4 HOH D 64 464 277 HOH HOH . N 4 HOH D 65 465 278 HOH HOH . N 4 HOH D 66 466 279 HOH HOH . N 4 HOH D 67 467 280 HOH HOH . N 4 HOH D 68 468 289 HOH HOH . N 4 HOH D 69 469 290 HOH HOH . N 4 HOH D 70 470 297 HOH HOH . N 4 HOH D 71 471 298 HOH HOH . N 4 HOH D 72 472 303 HOH HOH . N 4 HOH D 73 473 305 HOH HOH . N 4 HOH D 74 474 306 HOH HOH . O 4 HOH E 1 101 109 HOH HOH . O 4 HOH E 2 102 318 HOH HOH . P 4 HOH F 1 101 44 HOH HOH . P 4 HOH F 2 102 151 HOH HOH . P 4 HOH F 3 103 296 HOH HOH . Q 4 HOH H 1 101 43 HOH HOH . Q 4 HOH H 2 102 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 3 27.795 -46.367 1.382 1 67.73 ? P PO4 301 D 1 HETATM 2 O O1 PO4 . . . J 3 28.256 -45.139 0.633 1 74.09 ? O1 PO4 301 D 1 HETATM 3 O O2 PO4 . . . J 3 26.919 -47.207 0.484 1 67.54 ? O2 PO4 301 D 1 HETATM 4 O O3 PO4 . . . J 3 28.995 -47.177 1.812 1 71.33 ? O3 PO4 301 D 1 HETATM 5 O O4 PO4 . . . J 3 27.008 -45.948 2.6 1 60.18 ? O4 PO4 301 D 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #