data_4EJK # _model_server_result.job_id CYIK4nTjoXMwZqEODlIsaQ _model_server_result.datetime_utc '2024-11-13 10:37:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ejk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4EJK # _exptl.entry_id 4EJK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.211 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INDOLYLPROPIONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EJK _cell.length_a 28.652 _cell.length_b 65.796 _cell.length_c 92.052 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EJK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C IVA 1 N IVA 1 1_555 C N VAL 2 N VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? covale ? covale2 C C VAL 3 N VAL 3 1_555 C N STA 4 N STA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? covale ? covale3 C C STA 4 N STA 4 1_555 C N ALA 5 N ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? covale ? covale4 C C ALA 5 N ALA 5 1_555 C N STA 6 N STA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? # _chem_comp.formula 'C11 H11 N O2' _chem_comp.formula_weight 189.211 _chem_comp.id IOP _chem_comp.mon_nstd_flag . _chem_comp.name 'INDOLYLPROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EJK _atom_sites.fract_transf_matrix[1][1] 0.034902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010863 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 IOP A 1 101 202 IOP FN1 . E 4 HOH A 1 201 2 HOH HOH . E 4 HOH A 2 202 3 HOH HOH . E 4 HOH A 3 203 5 HOH HOH . E 4 HOH A 4 204 9 HOH HOH . E 4 HOH A 5 205 203 HOH HOH . E 4 HOH A 6 206 206 HOH HOH . E 4 HOH A 7 207 207 HOH HOH . E 4 HOH A 8 208 210 HOH HOH . E 4 HOH A 9 209 214 HOH HOH . E 4 HOH A 10 210 215 HOH HOH . E 4 HOH A 11 211 220 HOH HOH . E 4 HOH A 12 212 222 HOH HOH . E 4 HOH A 13 213 224 HOH HOH . E 4 HOH A 14 214 228 HOH HOH . E 4 HOH A 15 215 229 HOH HOH . E 4 HOH A 16 216 230 HOH HOH . E 4 HOH A 17 217 231 HOH HOH . E 4 HOH A 18 218 233 HOH HOH . E 4 HOH A 19 219 238 HOH HOH . E 4 HOH A 20 220 242 HOH HOH . E 4 HOH A 21 221 243 HOH HOH . E 4 HOH A 22 222 244 HOH HOH . E 4 HOH A 23 223 247 HOH HOH . E 4 HOH A 24 224 249 HOH HOH . E 4 HOH A 25 225 252 HOH HOH . E 4 HOH A 26 226 253 HOH HOH . E 4 HOH A 27 227 255 HOH HOH . E 4 HOH A 28 228 260 HOH HOH . E 4 HOH A 29 229 264 HOH HOH . E 4 HOH A 30 230 265 HOH HOH . E 4 HOH A 31 231 266 HOH HOH . E 4 HOH A 32 232 268 HOH HOH . E 4 HOH A 33 233 269 HOH HOH . E 4 HOH A 34 234 271 HOH HOH . E 4 HOH A 35 235 273 HOH HOH . E 4 HOH A 36 236 274 HOH HOH . E 4 HOH A 37 237 275 HOH HOH . E 4 HOH A 38 238 276 HOH HOH . E 4 HOH A 39 239 277 HOH HOH . E 4 HOH A 40 240 280 HOH HOH . E 4 HOH A 41 241 281 HOH HOH . E 4 HOH A 42 242 286 HOH HOH . E 4 HOH A 43 243 287 HOH HOH . E 4 HOH A 44 244 288 HOH HOH . E 4 HOH A 45 245 294 HOH HOH . E 4 HOH A 46 246 297 HOH HOH . E 4 HOH A 47 247 298 HOH HOH . E 4 HOH A 48 248 301 HOH HOH . E 4 HOH A 49 249 306 HOH HOH . E 4 HOH A 50 250 308 HOH HOH . E 4 HOH A 51 251 310 HOH HOH . F 4 HOH B 1 201 4 HOH HOH . F 4 HOH B 2 202 6 HOH HOH . F 4 HOH B 3 203 7 HOH HOH . F 4 HOH B 4 204 8 HOH HOH . F 4 HOH B 5 205 204 HOH HOH . F 4 HOH B 6 206 205 HOH HOH . F 4 HOH B 7 207 209 HOH HOH . F 4 HOH B 8 208 211 HOH HOH . F 4 HOH B 9 209 212 HOH HOH . F 4 HOH B 10 210 213 HOH HOH . F 4 HOH B 11 211 216 HOH HOH . F 4 HOH B 12 212 217 HOH HOH . F 4 HOH B 13 213 218 HOH HOH . F 4 HOH B 14 214 219 HOH HOH . F 4 HOH B 15 215 221 HOH HOH . F 4 HOH B 16 216 223 HOH HOH . F 4 HOH B 17 217 225 HOH HOH . F 4 HOH B 18 218 226 HOH HOH . F 4 HOH B 19 219 227 HOH HOH . F 4 HOH B 20 220 232 HOH HOH . F 4 HOH B 21 221 234 HOH HOH . F 4 HOH B 22 222 235 HOH HOH . F 4 HOH B 23 223 236 HOH HOH . F 4 HOH B 24 224 237 HOH HOH . F 4 HOH B 25 225 239 HOH HOH . F 4 HOH B 26 226 240 HOH HOH . F 4 HOH B 27 227 241 HOH HOH . F 4 HOH B 28 228 245 HOH HOH . F 4 HOH B 29 229 246 HOH HOH . F 4 HOH B 30 230 248 HOH HOH . F 4 HOH B 31 231 250 HOH HOH . F 4 HOH B 32 232 251 HOH HOH . F 4 HOH B 33 233 254 HOH HOH . F 4 HOH B 34 234 256 HOH HOH . F 4 HOH B 35 235 257 HOH HOH . F 4 HOH B 36 236 258 HOH HOH . F 4 HOH B 37 237 259 HOH HOH . F 4 HOH B 38 238 261 HOH HOH . F 4 HOH B 39 239 262 HOH HOH . F 4 HOH B 40 240 267 HOH HOH . F 4 HOH B 41 241 270 HOH HOH . F 4 HOH B 42 242 272 HOH HOH . F 4 HOH B 43 243 282 HOH HOH . F 4 HOH B 44 244 285 HOH HOH . F 4 HOH B 45 245 289 HOH HOH . F 4 HOH B 46 246 290 HOH HOH . F 4 HOH B 47 247 293 HOH HOH . F 4 HOH B 48 248 295 HOH HOH . F 4 HOH B 49 249 296 HOH HOH . F 4 HOH B 50 250 299 HOH HOH . F 4 HOH B 51 251 302 HOH HOH . F 4 HOH B 52 252 305 HOH HOH . F 4 HOH B 53 253 312 HOH HOH . F 4 HOH B 54 254 313 HOH HOH . F 4 HOH B 55 255 314 HOH HOH . G 4 HOH N 1 101 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' IOP . . . D 3 8.83 22.085 25.272 1 12.08 ? C1' IOP 101 A 1 HETATM 2 O O1 IOP . . . D 3 7.697 21.647 25.266 1 12.38 ? O1 IOP 101 A 1 HETATM 3 O O2 IOP . . . D 3 8.98 23.314 25.755 1 11.96 ? O2 IOP 101 A 1 HETATM 4 C C2' IOP . . . D 3 9.962 21.22 24.759 1 12.03 ? C2' IOP 101 A 1 HETATM 5 C C3' IOP . . . D 3 11.087 22.072 24.16 1 11.91 ? C3' IOP 101 A 1 HETATM 6 N N1 IOP . . . D 3 13.277 19.51 22.579 1 11.74 ? N1 IOP 101 A 1 HETATM 7 C C2 IOP . . . D 3 12.14 19.861 23.219 1 11.72 ? C2 IOP 101 A 1 HETATM 8 C C3 IOP . . . D 3 12.142 21.229 23.469 1 11.85 ? C3 IOP 101 A 1 HETATM 9 C C3A IOP . . . D 3 13.348 21.702 22.94 1 11.82 ? C3A IOP 101 A 1 HETATM 10 C C4 IOP . . . D 3 13.888 22.988 22.887 1 11.82 ? C4 IOP 101 A 1 HETATM 11 C C5 IOP . . . D 3 15.137 23.115 22.28 1 11.87 ? C5 IOP 101 A 1 HETATM 12 C C6 IOP . . . D 3 15.812 22.024 21.736 1 11.92 ? C6 IOP 101 A 1 HETATM 13 C C7 IOP . . . D 3 15.272 20.74 21.781 1 11.81 ? C7 IOP 101 A 1 HETATM 14 C C7A IOP . . . D 3 14.025 20.613 22.394 1 11.73 ? C7A IOP 101 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #