data_4EJL # _model_server_result.job_id ZKwQ2NW8BzO-0vzRFDVV8A _model_server_result.datetime_utc '2024-11-29 01:29:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ejl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":105}' # _entry.id 4EJL # _exptl.entry_id 4EJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EJL _cell.length_a 28.815 _cell.length_b 65.91 _cell.length_c 92.514 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 J N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 4EJL _atom_sites.fract_transf_matrix[1][1] 0.034704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 101 1 PEG PEG . D 3 DMS A 1 102 1 DMS DMS . E 4 GOL A 1 103 5 GOL GOL . F 4 GOL A 1 104 6 GOL GOL . G 4 GOL A 1 105 7 GOL GOL . H 5 IOP A 1 106 30 IOP FN1 . I 3 DMS B 1 101 2 DMS DMS . J 4 GOL B 1 102 3 GOL GOL . K 6 HOH A 1 201 1 HOH HOH . K 6 HOH A 2 202 14 HOH HOH . K 6 HOH A 3 203 16 HOH HOH . K 6 HOH A 4 204 18 HOH HOH . K 6 HOH A 5 205 24 HOH HOH . K 6 HOH A 6 206 26 HOH HOH . K 6 HOH A 7 207 33 HOH HOH . K 6 HOH A 8 208 34 HOH HOH . K 6 HOH A 9 209 35 HOH HOH . K 6 HOH A 10 210 36 HOH HOH . K 6 HOH A 11 211 37 HOH HOH . K 6 HOH A 12 212 38 HOH HOH . K 6 HOH A 13 213 39 HOH HOH . K 6 HOH A 14 214 42 HOH HOH . K 6 HOH A 15 215 46 HOH HOH . K 6 HOH A 16 216 50 HOH HOH . K 6 HOH A 17 217 52 HOH HOH . K 6 HOH A 18 218 53 HOH HOH . K 6 HOH A 19 219 56 HOH HOH . K 6 HOH A 20 220 61 HOH HOH . K 6 HOH A 21 221 64 HOH HOH . K 6 HOH A 22 222 68 HOH HOH . K 6 HOH A 23 223 70 HOH HOH . K 6 HOH A 24 224 72 HOH HOH . K 6 HOH A 25 225 73 HOH HOH . K 6 HOH A 26 226 76 HOH HOH . L 6 HOH B 1 201 10 HOH HOH . L 6 HOH B 2 202 11 HOH HOH . L 6 HOH B 3 203 12 HOH HOH . L 6 HOH B 4 204 17 HOH HOH . L 6 HOH B 5 205 21 HOH HOH . L 6 HOH B 6 206 22 HOH HOH . L 6 HOH B 7 207 31 HOH HOH . L 6 HOH B 8 208 40 HOH HOH . L 6 HOH B 9 209 41 HOH HOH . L 6 HOH B 10 210 44 HOH HOH . L 6 HOH B 11 211 45 HOH HOH . L 6 HOH B 12 212 48 HOH HOH . L 6 HOH B 13 213 51 HOH HOH . L 6 HOH B 14 214 57 HOH HOH . L 6 HOH B 15 215 58 HOH HOH . L 6 HOH B 16 216 65 HOH HOH . L 6 HOH B 17 217 67 HOH HOH . L 6 HOH B 18 218 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 -4.268 3.79 -33.052 1 31.87 ? C1 GOL 105 A 1 HETATM 2 O O1 GOL . . . G 4 -4.383 2.85 -34.135 1 32.97 ? O1 GOL 105 A 1 HETATM 3 C C2 GOL . . . G 4 -5.023 3.271 -31.838 1 30.92 ? C2 GOL 105 A 1 HETATM 4 O O2 GOL . . . G 4 -6.427 3.532 -31.979 1 31.07 ? O2 GOL 105 A 1 HETATM 5 C C3 GOL . . . G 4 -4.51 3.974 -30.591 1 30.8 ? C3 GOL 105 A 1 HETATM 6 O O3 GOL . . . G 4 -4.286 3.001 -29.562 1 29.77 ? O3 GOL 105 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #