data_4EJN # _model_server_result.job_id uyja2WINW1-xzylMhDqwHw _model_server_result.datetime_utc '2024-11-29 14:25:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ejn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 4EJN # _exptl.entry_id 4EJN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EJN _cell.length_a 44.508 _cell.length_b 88.214 _cell.length_c 126.936 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EJN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 60 A CYS 60 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 296 A CYS 296 1_555 A SG CYS 310 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 157 n n C1 C2 EDO sing 158 n n C1 H11 EDO sing 159 n n C1 H12 EDO sing 160 n n O1 HO1 EDO sing 161 n n C2 O2 EDO sing 162 n n C2 H21 EDO sing 163 n n C2 H22 EDO sing 164 n n O2 HO2 EDO sing 165 n n # _atom_sites.entry_id 4EJN _atom_sites.fract_transf_matrix[1][1] 0.022468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011336 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0R4 A 1 501 1 0R4 AK1 . C 3 SBT A 1 502 1 SBT SBT . D 4 EDO A 1 503 1 EDO EDO . E 5 HOH A 1 601 1 HOH HOH . E 5 HOH A 2 602 2 HOH HOH . E 5 HOH A 3 603 3 HOH HOH . E 5 HOH A 4 604 4 HOH HOH . E 5 HOH A 5 605 5 HOH HOH . E 5 HOH A 6 606 6 HOH HOH . E 5 HOH A 7 607 7 HOH HOH . E 5 HOH A 8 608 8 HOH HOH . E 5 HOH A 9 609 9 HOH HOH . E 5 HOH A 10 610 10 HOH HOH . E 5 HOH A 11 611 11 HOH HOH . E 5 HOH A 12 612 12 HOH HOH . E 5 HOH A 13 613 13 HOH HOH . E 5 HOH A 14 614 14 HOH HOH . E 5 HOH A 15 615 15 HOH HOH . E 5 HOH A 16 616 16 HOH HOH . E 5 HOH A 17 617 17 HOH HOH . E 5 HOH A 18 618 18 HOH HOH . E 5 HOH A 19 619 19 HOH HOH . E 5 HOH A 20 620 20 HOH HOH . E 5 HOH A 21 621 21 HOH HOH . E 5 HOH A 22 622 22 HOH HOH . E 5 HOH A 23 623 23 HOH HOH . E 5 HOH A 24 624 25 HOH HOH . E 5 HOH A 25 625 26 HOH HOH . E 5 HOH A 26 626 27 HOH HOH . E 5 HOH A 27 627 28 HOH HOH . E 5 HOH A 28 628 29 HOH HOH . E 5 HOH A 29 629 30 HOH HOH . E 5 HOH A 30 630 32 HOH HOH . E 5 HOH A 31 631 33 HOH HOH . E 5 HOH A 32 632 34 HOH HOH . E 5 HOH A 33 633 35 HOH HOH . E 5 HOH A 34 634 36 HOH HOH . E 5 HOH A 35 635 37 HOH HOH . E 5 HOH A 36 636 38 HOH HOH . E 5 HOH A 37 637 39 HOH HOH . E 5 HOH A 38 638 40 HOH HOH . E 5 HOH A 39 639 42 HOH HOH . E 5 HOH A 40 640 43 HOH HOH . E 5 HOH A 41 641 44 HOH HOH . E 5 HOH A 42 642 45 HOH HOH . E 5 HOH A 43 643 46 HOH HOH . E 5 HOH A 44 644 47 HOH HOH . E 5 HOH A 45 645 48 HOH HOH . E 5 HOH A 46 646 49 HOH HOH . E 5 HOH A 47 647 50 HOH HOH . E 5 HOH A 48 648 51 HOH HOH . E 5 HOH A 49 649 52 HOH HOH . E 5 HOH A 50 650 53 HOH HOH . E 5 HOH A 51 651 54 HOH HOH . E 5 HOH A 52 652 55 HOH HOH . E 5 HOH A 53 653 56 HOH HOH . E 5 HOH A 54 654 57 HOH HOH . E 5 HOH A 55 655 58 HOH HOH . E 5 HOH A 56 656 59 HOH HOH . E 5 HOH A 57 657 60 HOH HOH . E 5 HOH A 58 658 61 HOH HOH . E 5 HOH A 59 659 62 HOH HOH . E 5 HOH A 60 660 63 HOH HOH . E 5 HOH A 61 661 64 HOH HOH . E 5 HOH A 62 662 65 HOH HOH . E 5 HOH A 63 663 66 HOH HOH . E 5 HOH A 64 664 67 HOH HOH . E 5 HOH A 65 665 68 HOH HOH . E 5 HOH A 66 666 69 HOH HOH . E 5 HOH A 67 667 70 HOH HOH . E 5 HOH A 68 668 71 HOH HOH . E 5 HOH A 69 669 72 HOH HOH . E 5 HOH A 70 670 73 HOH HOH . E 5 HOH A 71 671 74 HOH HOH . E 5 HOH A 72 672 75 HOH HOH . E 5 HOH A 73 673 76 HOH HOH . E 5 HOH A 74 674 77 HOH HOH . E 5 HOH A 75 675 78 HOH HOH . E 5 HOH A 76 676 79 HOH HOH . E 5 HOH A 77 677 80 HOH HOH . E 5 HOH A 78 678 81 HOH HOH . E 5 HOH A 79 679 82 HOH HOH . E 5 HOH A 80 680 83 HOH HOH . E 5 HOH A 81 681 84 HOH HOH . E 5 HOH A 82 682 85 HOH HOH . E 5 HOH A 83 683 86 HOH HOH . E 5 HOH A 84 684 87 HOH HOH . E 5 HOH A 85 685 88 HOH HOH . E 5 HOH A 86 686 89 HOH HOH . E 5 HOH A 87 687 90 HOH HOH . E 5 HOH A 88 688 91 HOH HOH . E 5 HOH A 89 689 92 HOH HOH . E 5 HOH A 90 690 93 HOH HOH . E 5 HOH A 91 691 94 HOH HOH . E 5 HOH A 92 692 95 HOH HOH . E 5 HOH A 93 693 96 HOH HOH . E 5 HOH A 94 694 97 HOH HOH . E 5 HOH A 95 695 98 HOH HOH . E 5 HOH A 96 696 99 HOH HOH . E 5 HOH A 97 697 100 HOH HOH . E 5 HOH A 98 698 101 HOH HOH . E 5 HOH A 99 699 102 HOH HOH . E 5 HOH A 100 700 103 HOH HOH . E 5 HOH A 101 701 104 HOH HOH . E 5 HOH A 102 702 105 HOH HOH . E 5 HOH A 103 703 106 HOH HOH . E 5 HOH A 104 704 107 HOH HOH . E 5 HOH A 105 705 108 HOH HOH . E 5 HOH A 106 706 110 HOH HOH . E 5 HOH A 107 707 111 HOH HOH . E 5 HOH A 108 708 112 HOH HOH . E 5 HOH A 109 709 113 HOH HOH . E 5 HOH A 110 710 114 HOH HOH . E 5 HOH A 111 711 115 HOH HOH . E 5 HOH A 112 712 116 HOH HOH . E 5 HOH A 113 713 117 HOH HOH . E 5 HOH A 114 714 118 HOH HOH . E 5 HOH A 115 715 119 HOH HOH . E 5 HOH A 116 716 120 HOH HOH . E 5 HOH A 117 717 121 HOH HOH . E 5 HOH A 118 718 122 HOH HOH . E 5 HOH A 119 719 123 HOH HOH . E 5 HOH A 120 720 124 HOH HOH . E 5 HOH A 121 721 125 HOH HOH . E 5 HOH A 122 722 126 HOH HOH . E 5 HOH A 123 723 127 HOH HOH . E 5 HOH A 124 724 128 HOH HOH . E 5 HOH A 125 725 129 HOH HOH . E 5 HOH A 126 726 130 HOH HOH . E 5 HOH A 127 727 131 HOH HOH . E 5 HOH A 128 728 132 HOH HOH . E 5 HOH A 129 729 133 HOH HOH . E 5 HOH A 130 730 134 HOH HOH . E 5 HOH A 131 731 135 HOH HOH . E 5 HOH A 132 732 136 HOH HOH . E 5 HOH A 133 733 137 HOH HOH . E 5 HOH A 134 734 138 HOH HOH . E 5 HOH A 135 735 139 HOH HOH . E 5 HOH A 136 736 140 HOH HOH . E 5 HOH A 137 737 141 HOH HOH . E 5 HOH A 138 738 142 HOH HOH . E 5 HOH A 139 739 144 HOH HOH . E 5 HOH A 140 740 145 HOH HOH . E 5 HOH A 141 741 147 HOH HOH . E 5 HOH A 142 742 148 HOH HOH . E 5 HOH A 143 743 149 HOH HOH . E 5 HOH A 144 744 150 HOH HOH . E 5 HOH A 145 745 151 HOH HOH . E 5 HOH A 146 746 152 HOH HOH . E 5 HOH A 147 747 153 HOH HOH . E 5 HOH A 148 748 154 HOH HOH . E 5 HOH A 149 749 155 HOH HOH . E 5 HOH A 150 750 156 HOH HOH . E 5 HOH A 151 751 157 HOH HOH . E 5 HOH A 152 752 158 HOH HOH . E 5 HOH A 153 753 159 HOH HOH . E 5 HOH A 154 754 160 HOH HOH . E 5 HOH A 155 755 162 HOH HOH . E 5 HOH A 156 756 163 HOH HOH . E 5 HOH A 157 757 164 HOH HOH . E 5 HOH A 158 758 165 HOH HOH . E 5 HOH A 159 759 166 HOH HOH . E 5 HOH A 160 760 168 HOH HOH . E 5 HOH A 161 761 169 HOH HOH . E 5 HOH A 162 762 170 HOH HOH . E 5 HOH A 163 763 171 HOH HOH . E 5 HOH A 164 764 172 HOH HOH . E 5 HOH A 165 765 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 23.911 63.539 23.483 1 71.47 ? C1 EDO 503 A 1 HETATM 2 O O1 EDO . . . D 4 24.166 64.733 24.234 1 70.42 ? O1 EDO 503 A 1 HETATM 3 C C2 EDO . . . D 4 23.208 63.879 22.172 1 71.74 ? C2 EDO 503 A 1 HETATM 4 O O2 EDO . . . D 4 23.262 62.76 21.274 1 71.65 ? O2 EDO 503 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #