data_4EKN # _model_server_result.job_id D8R7rockImy-DCZBLVt9Hg _model_server_result.datetime_utc '2024-12-03 00:18:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ekn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4EKN # _exptl.entry_id 4EKN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4EKN _cell.length_a 96.96 _cell.length_b 96.96 _cell.length_c 136.439 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1,2,3 A,B,C,D,E,F,G,H 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 96.96 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 48.48 83.969823 0 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 48.48 83.969823 68.2195 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 96.96 0 68.2195 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 68.2195 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 68 B GLU 68 1_555 F K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc2 A OE1 GLU 68 B GLU 68 1_555 F K K . B K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 4EKN _atom_sites.fract_transf_matrix[1][1] 0.010314 _atom_sites.fract_transf_matrix[1][2] 0.005955 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011909 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 B 1 401 1 SO4 SO4 . C 2 SO4 B 1 402 2 SO4 SO4 . D 2 SO4 B 1 403 3 SO4 SO4 . E 2 SO4 B 1 404 4 SO4 SO4 . F 3 K B 1 405 5 K K . G 4 GOL B 1 406 500 GOL GOL . H 5 HOH B 1 501 1 HOH HOH . H 5 HOH B 2 502 2 HOH HOH . H 5 HOH B 3 503 3 HOH HOH . H 5 HOH B 4 504 4 HOH HOH . H 5 HOH B 5 505 5 HOH HOH . H 5 HOH B 6 506 6 HOH HOH . H 5 HOH B 7 507 7 HOH HOH . H 5 HOH B 8 508 8 HOH HOH . H 5 HOH B 9 509 9 HOH HOH . H 5 HOH B 10 510 10 HOH HOH . H 5 HOH B 11 511 11 HOH HOH . H 5 HOH B 12 512 12 HOH HOH . H 5 HOH B 13 513 13 HOH HOH . H 5 HOH B 14 514 14 HOH HOH . H 5 HOH B 15 515 15 HOH HOH . H 5 HOH B 16 516 16 HOH HOH . H 5 HOH B 17 517 17 HOH HOH . H 5 HOH B 18 518 18 HOH HOH . H 5 HOH B 19 519 19 HOH HOH . H 5 HOH B 20 520 20 HOH HOH . H 5 HOH B 21 521 21 HOH HOH . H 5 HOH B 22 522 22 HOH HOH . H 5 HOH B 23 523 23 HOH HOH . H 5 HOH B 24 524 24 HOH HOH . H 5 HOH B 25 525 25 HOH HOH . H 5 HOH B 26 526 26 HOH HOH . H 5 HOH B 27 527 27 HOH HOH . H 5 HOH B 28 528 28 HOH HOH . H 5 HOH B 29 529 29 HOH HOH . H 5 HOH B 30 530 30 HOH HOH . H 5 HOH B 31 531 31 HOH HOH . H 5 HOH B 32 532 32 HOH HOH . H 5 HOH B 33 533 33 HOH HOH . H 5 HOH B 34 534 34 HOH HOH . H 5 HOH B 35 535 35 HOH HOH . H 5 HOH B 36 536 36 HOH HOH . H 5 HOH B 37 537 37 HOH HOH . H 5 HOH B 38 538 38 HOH HOH . H 5 HOH B 39 539 39 HOH HOH . H 5 HOH B 40 540 40 HOH HOH . H 5 HOH B 41 541 41 HOH HOH . H 5 HOH B 42 542 42 HOH HOH . H 5 HOH B 43 543 43 HOH HOH . H 5 HOH B 44 544 44 HOH HOH . H 5 HOH B 45 545 45 HOH HOH . H 5 HOH B 46 546 46 HOH HOH . H 5 HOH B 47 547 47 HOH HOH . H 5 HOH B 48 548 48 HOH HOH . H 5 HOH B 49 549 49 HOH HOH . H 5 HOH B 50 550 50 HOH HOH . H 5 HOH B 51 551 51 HOH HOH . H 5 HOH B 52 552 52 HOH HOH . H 5 HOH B 53 553 53 HOH HOH . H 5 HOH B 54 554 54 HOH HOH . H 5 HOH B 55 555 55 HOH HOH . H 5 HOH B 56 556 56 HOH HOH . H 5 HOH B 57 557 57 HOH HOH . H 5 HOH B 58 558 58 HOH HOH . H 5 HOH B 59 559 59 HOH HOH . H 5 HOH B 60 560 60 HOH HOH . H 5 HOH B 61 561 61 HOH HOH . H 5 HOH B 62 562 62 HOH HOH . H 5 HOH B 63 563 63 HOH HOH . H 5 HOH B 64 564 64 HOH HOH . H 5 HOH B 65 565 65 HOH HOH . H 5 HOH B 66 566 66 HOH HOH . H 5 HOH B 67 567 67 HOH HOH . H 5 HOH B 68 568 68 HOH HOH . H 5 HOH B 69 569 69 HOH HOH . H 5 HOH B 70 570 70 HOH HOH . H 5 HOH B 71 571 71 HOH HOH . H 5 HOH B 72 572 72 HOH HOH . H 5 HOH B 73 573 73 HOH HOH . H 5 HOH B 74 574 74 HOH HOH . H 5 HOH B 75 575 75 HOH HOH . H 5 HOH B 76 576 76 HOH HOH . H 5 HOH B 77 577 77 HOH HOH . H 5 HOH B 78 578 78 HOH HOH . H 5 HOH B 79 579 79 HOH HOH . H 5 HOH B 80 580 80 HOH HOH . H 5 HOH B 81 581 81 HOH HOH . H 5 HOH B 82 582 82 HOH HOH . H 5 HOH B 83 583 83 HOH HOH . H 5 HOH B 84 584 84 HOH HOH . H 5 HOH B 85 585 85 HOH HOH . H 5 HOH B 86 586 86 HOH HOH . H 5 HOH B 87 587 87 HOH HOH . H 5 HOH B 88 588 88 HOH HOH . H 5 HOH B 89 589 89 HOH HOH . H 5 HOH B 90 590 90 HOH HOH . H 5 HOH B 91 591 91 HOH HOH . H 5 HOH B 92 592 92 HOH HOH . H 5 HOH B 93 593 93 HOH HOH . H 5 HOH B 94 594 94 HOH HOH . H 5 HOH B 95 595 95 HOH HOH . H 5 HOH B 96 596 96 HOH HOH . H 5 HOH B 97 597 97 HOH HOH . H 5 HOH B 98 598 98 HOH HOH . H 5 HOH B 99 599 99 HOH HOH . H 5 HOH B 100 600 100 HOH HOH . H 5 HOH B 101 601 101 HOH HOH . H 5 HOH B 102 602 102 HOH HOH . H 5 HOH B 103 603 103 HOH HOH . H 5 HOH B 104 604 104 HOH HOH . H 5 HOH B 105 605 105 HOH HOH . H 5 HOH B 106 606 106 HOH HOH . H 5 HOH B 107 607 107 HOH HOH . H 5 HOH B 108 608 108 HOH HOH . H 5 HOH B 109 609 109 HOH HOH . H 5 HOH B 110 610 110 HOH HOH . H 5 HOH B 111 611 111 HOH HOH . H 5 HOH B 112 612 112 HOH HOH . H 5 HOH B 113 613 113 HOH HOH . H 5 HOH B 114 614 114 HOH HOH . H 5 HOH B 115 615 115 HOH HOH . H 5 HOH B 116 616 116 HOH HOH . H 5 HOH B 117 617 117 HOH HOH . H 5 HOH B 118 618 118 HOH HOH . H 5 HOH B 119 619 119 HOH HOH . H 5 HOH B 120 620 120 HOH HOH . H 5 HOH B 121 621 121 HOH HOH . H 5 HOH B 122 622 122 HOH HOH . H 5 HOH B 123 623 123 HOH HOH . H 5 HOH B 124 624 124 HOH HOH . H 5 HOH B 125 625 125 HOH HOH . H 5 HOH B 126 626 126 HOH HOH . H 5 HOH B 127 627 127 HOH HOH . H 5 HOH B 128 628 128 HOH HOH . H 5 HOH B 129 629 129 HOH HOH . H 5 HOH B 130 630 130 HOH HOH . H 5 HOH B 131 631 131 HOH HOH . H 5 HOH B 132 632 132 HOH HOH . H 5 HOH B 133 633 133 HOH HOH . H 5 HOH B 134 634 134 HOH HOH . H 5 HOH B 135 635 135 HOH HOH . H 5 HOH B 136 636 136 HOH HOH . H 5 HOH B 137 637 137 HOH HOH . H 5 HOH B 138 638 138 HOH HOH . H 5 HOH B 139 639 139 HOH HOH . H 5 HOH B 140 640 140 HOH HOH . H 5 HOH B 141 641 141 HOH HOH . H 5 HOH B 142 642 142 HOH HOH . H 5 HOH B 143 643 143 HOH HOH . H 5 HOH B 144 644 144 HOH HOH . H 5 HOH B 145 645 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 48.476 27.981 10.238 0.33 33.2 ? S SO4 401 B 1 HETATM 2 O O1 SO4 . . . B 2 47.272 27.297 9.777 0.33 33.71 ? O1 SO4 401 B 1 HETATM 3 O O2 SO4 . . . B 2 48.491 28.003 11.697 0.33 40.52 ? O2 SO4 401 B 1 HETATM 4 O O3 SO4 . . . B 2 48.483 29.35 9.734 0.33 32.82 ? O3 SO4 401 B 1 HETATM 5 O O4 SO4 . . . B 2 49.657 27.276 9.753 0.33 33.11 ? O4 SO4 401 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #