data_4EL8 # _model_server_result.job_id aWqPmpCRxFCMmb5LZ6W_iA _model_server_result.datetime_utc '2024-11-16 23:25:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4el8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 4EL8 # _exptl.entry_id 4EL8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.3 _cell.angle_gamma 90 _cell.entry_id 4EL8 _cell.length_a 116.3 _cell.length_b 57.666 _cell.length_c 106.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EL8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 182 A GLU 182 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc2 A OE2 GLU 187 A GLU 187 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 A OE1 GLU 187 A GLU 187 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.103 ? metalc ? metalc4 A OD2 ASP 406 A ASP 406 1_555 B CA CA . A CA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4EL8 _atom_sites.fract_transf_matrix[1][1] 0.008598 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001875 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 701 1 CA CA . C 3 SO4 A 1 702 1 SO4 SO4 . D 4 EDO A 1 703 1 EDO EDO . E 5 HOH A 1 801 1 HOH HOH . E 5 HOH A 2 802 2 HOH HOH . E 5 HOH A 3 803 3 HOH HOH . E 5 HOH A 4 804 4 HOH HOH . E 5 HOH A 5 805 5 HOH HOH . E 5 HOH A 6 806 6 HOH HOH . E 5 HOH A 7 807 7 HOH HOH . E 5 HOH A 8 808 8 HOH HOH . E 5 HOH A 9 809 9 HOH HOH . E 5 HOH A 10 810 10 HOH HOH . E 5 HOH A 11 811 11 HOH HOH . E 5 HOH A 12 812 12 HOH HOH . E 5 HOH A 13 813 13 HOH HOH . E 5 HOH A 14 814 14 HOH HOH . E 5 HOH A 15 815 15 HOH HOH . E 5 HOH A 16 816 16 HOH HOH . E 5 HOH A 17 817 17 HOH HOH . E 5 HOH A 18 818 18 HOH HOH . E 5 HOH A 19 819 19 HOH HOH . E 5 HOH A 20 820 20 HOH HOH . E 5 HOH A 21 821 21 HOH HOH . E 5 HOH A 22 822 22 HOH HOH . E 5 HOH A 23 823 23 HOH HOH . E 5 HOH A 24 824 24 HOH HOH . E 5 HOH A 25 825 25 HOH HOH . E 5 HOH A 26 826 26 HOH HOH . E 5 HOH A 27 827 27 HOH HOH . E 5 HOH A 28 828 28 HOH HOH . E 5 HOH A 29 829 29 HOH HOH . E 5 HOH A 30 830 30 HOH HOH . E 5 HOH A 31 831 31 HOH HOH . E 5 HOH A 32 832 32 HOH HOH . E 5 HOH A 33 833 33 HOH HOH . E 5 HOH A 34 834 34 HOH HOH . E 5 HOH A 35 835 35 HOH HOH . E 5 HOH A 36 836 36 HOH HOH . E 5 HOH A 37 837 37 HOH HOH . E 5 HOH A 38 838 38 HOH HOH . E 5 HOH A 39 839 39 HOH HOH . E 5 HOH A 40 840 40 HOH HOH . E 5 HOH A 41 841 41 HOH HOH . E 5 HOH A 42 842 42 HOH HOH . E 5 HOH A 43 843 44 HOH HOH . E 5 HOH A 44 844 45 HOH HOH . E 5 HOH A 45 845 46 HOH HOH . E 5 HOH A 46 846 47 HOH HOH . E 5 HOH A 47 847 48 HOH HOH . E 5 HOH A 48 848 49 HOH HOH . E 5 HOH A 49 849 50 HOH HOH . E 5 HOH A 50 850 51 HOH HOH . E 5 HOH A 51 851 52 HOH HOH . E 5 HOH A 52 852 53 HOH HOH . E 5 HOH A 53 853 54 HOH HOH . E 5 HOH A 54 854 55 HOH HOH . E 5 HOH A 55 855 56 HOH HOH . E 5 HOH A 56 856 57 HOH HOH . E 5 HOH A 57 857 58 HOH HOH . E 5 HOH A 58 858 59 HOH HOH . E 5 HOH A 59 859 60 HOH HOH . E 5 HOH A 60 860 61 HOH HOH . E 5 HOH A 61 861 62 HOH HOH . E 5 HOH A 62 862 63 HOH HOH . E 5 HOH A 63 863 64 HOH HOH . E 5 HOH A 64 864 65 HOH HOH . E 5 HOH A 65 865 66 HOH HOH . E 5 HOH A 66 866 67 HOH HOH . E 5 HOH A 67 867 68 HOH HOH . E 5 HOH A 68 868 69 HOH HOH . E 5 HOH A 69 869 70 HOH HOH . E 5 HOH A 70 870 71 HOH HOH . E 5 HOH A 71 871 72 HOH HOH . E 5 HOH A 72 872 73 HOH HOH . E 5 HOH A 73 873 74 HOH HOH . E 5 HOH A 74 874 75 HOH HOH . E 5 HOH A 75 875 76 HOH HOH . E 5 HOH A 76 876 77 HOH HOH . E 5 HOH A 77 877 78 HOH HOH . E 5 HOH A 78 878 79 HOH HOH . E 5 HOH A 79 879 80 HOH HOH . E 5 HOH A 80 880 81 HOH HOH . E 5 HOH A 81 881 82 HOH HOH . E 5 HOH A 82 882 83 HOH HOH . E 5 HOH A 83 883 84 HOH HOH . E 5 HOH A 84 884 85 HOH HOH . E 5 HOH A 85 885 86 HOH HOH . E 5 HOH A 86 886 87 HOH HOH . E 5 HOH A 87 887 88 HOH HOH . E 5 HOH A 88 888 89 HOH HOH . E 5 HOH A 89 889 90 HOH HOH . E 5 HOH A 90 890 91 HOH HOH . E 5 HOH A 91 891 92 HOH HOH . E 5 HOH A 92 892 93 HOH HOH . E 5 HOH A 93 893 94 HOH HOH . E 5 HOH A 94 894 95 HOH HOH . E 5 HOH A 95 895 96 HOH HOH . E 5 HOH A 96 896 97 HOH HOH . E 5 HOH A 97 897 98 HOH HOH . E 5 HOH A 98 898 99 HOH HOH . E 5 HOH A 99 899 100 HOH HOH . E 5 HOH A 100 900 101 HOH HOH . E 5 HOH A 101 901 102 HOH HOH . E 5 HOH A 102 902 103 HOH HOH . E 5 HOH A 103 903 104 HOH HOH . E 5 HOH A 104 904 105 HOH HOH . E 5 HOH A 105 905 107 HOH HOH . E 5 HOH A 106 906 108 HOH HOH . E 5 HOH A 107 907 109 HOH HOH . E 5 HOH A 108 908 110 HOH HOH . E 5 HOH A 109 909 111 HOH HOH . E 5 HOH A 110 910 112 HOH HOH . E 5 HOH A 111 911 113 HOH HOH . E 5 HOH A 112 912 114 HOH HOH . E 5 HOH A 113 913 115 HOH HOH . E 5 HOH A 114 914 116 HOH HOH . E 5 HOH A 115 915 117 HOH HOH . E 5 HOH A 116 916 118 HOH HOH . E 5 HOH A 117 917 119 HOH HOH . E 5 HOH A 118 918 120 HOH HOH . E 5 HOH A 119 919 121 HOH HOH . E 5 HOH A 120 920 122 HOH HOH . E 5 HOH A 121 921 123 HOH HOH . E 5 HOH A 122 922 124 HOH HOH . E 5 HOH A 123 923 125 HOH HOH . E 5 HOH A 124 924 126 HOH HOH . E 5 HOH A 125 925 127 HOH HOH . E 5 HOH A 126 926 129 HOH HOH . E 5 HOH A 127 927 130 HOH HOH . E 5 HOH A 128 928 131 HOH HOH . E 5 HOH A 129 929 132 HOH HOH . E 5 HOH A 130 930 133 HOH HOH . E 5 HOH A 131 931 135 HOH HOH . E 5 HOH A 132 932 136 HOH HOH . E 5 HOH A 133 933 137 HOH HOH . E 5 HOH A 134 934 138 HOH HOH . E 5 HOH A 135 935 139 HOH HOH . E 5 HOH A 136 936 140 HOH HOH . E 5 HOH A 137 937 141 HOH HOH . E 5 HOH A 138 938 142 HOH HOH . E 5 HOH A 139 939 143 HOH HOH . E 5 HOH A 140 940 144 HOH HOH . E 5 HOH A 141 941 145 HOH HOH . E 5 HOH A 142 942 146 HOH HOH . E 5 HOH A 143 943 147 HOH HOH . E 5 HOH A 144 944 148 HOH HOH . E 5 HOH A 145 945 149 HOH HOH . E 5 HOH A 146 946 150 HOH HOH . E 5 HOH A 147 947 151 HOH HOH . E 5 HOH A 148 948 152 HOH HOH . E 5 HOH A 149 949 153 HOH HOH . E 5 HOH A 150 950 154 HOH HOH . E 5 HOH A 151 951 155 HOH HOH . E 5 HOH A 152 952 156 HOH HOH . E 5 HOH A 153 953 157 HOH HOH . E 5 HOH A 154 954 158 HOH HOH . E 5 HOH A 155 955 159 HOH HOH . E 5 HOH A 156 956 160 HOH HOH . E 5 HOH A 157 957 161 HOH HOH . E 5 HOH A 158 958 162 HOH HOH . E 5 HOH A 159 959 163 HOH HOH . E 5 HOH A 160 960 164 HOH HOH . E 5 HOH A 161 961 165 HOH HOH . E 5 HOH A 162 962 166 HOH HOH . E 5 HOH A 163 963 167 HOH HOH . E 5 HOH A 164 964 168 HOH HOH . E 5 HOH A 165 965 169 HOH HOH . E 5 HOH A 166 966 170 HOH HOH . E 5 HOH A 167 967 171 HOH HOH . E 5 HOH A 168 968 172 HOH HOH . E 5 HOH A 169 969 173 HOH HOH . E 5 HOH A 170 970 174 HOH HOH . E 5 HOH A 171 971 175 HOH HOH . E 5 HOH A 172 972 176 HOH HOH . E 5 HOH A 173 973 177 HOH HOH . E 5 HOH A 174 974 178 HOH HOH . E 5 HOH A 175 975 179 HOH HOH . E 5 HOH A 176 976 180 HOH HOH . E 5 HOH A 177 977 181 HOH HOH . E 5 HOH A 178 978 182 HOH HOH . E 5 HOH A 179 979 183 HOH HOH . E 5 HOH A 180 980 184 HOH HOH . E 5 HOH A 181 981 185 HOH HOH . E 5 HOH A 182 982 186 HOH HOH . E 5 HOH A 183 983 187 HOH HOH . E 5 HOH A 184 984 188 HOH HOH . E 5 HOH A 185 985 189 HOH HOH . E 5 HOH A 186 986 190 HOH HOH . E 5 HOH A 187 987 191 HOH HOH . E 5 HOH A 188 988 192 HOH HOH . E 5 HOH A 189 989 193 HOH HOH . E 5 HOH A 190 990 194 HOH HOH . E 5 HOH A 191 991 195 HOH HOH . E 5 HOH A 192 992 196 HOH HOH . E 5 HOH A 193 993 197 HOH HOH . E 5 HOH A 194 994 198 HOH HOH . E 5 HOH A 195 995 199 HOH HOH . E 5 HOH A 196 996 200 HOH HOH . E 5 HOH A 197 997 201 HOH HOH . E 5 HOH A 198 998 202 HOH HOH . E 5 HOH A 199 999 203 HOH HOH . E 5 HOH A 200 1000 204 HOH HOH . E 5 HOH A 201 1001 205 HOH HOH . E 5 HOH A 202 1002 206 HOH HOH . E 5 HOH A 203 1003 207 HOH HOH . E 5 HOH A 204 1004 208 HOH HOH . E 5 HOH A 205 1005 209 HOH HOH . E 5 HOH A 206 1006 210 HOH HOH . E 5 HOH A 207 1007 211 HOH HOH . E 5 HOH A 208 1008 212 HOH HOH . E 5 HOH A 209 1009 213 HOH HOH . E 5 HOH A 210 1010 214 HOH HOH . E 5 HOH A 211 1011 215 HOH HOH . E 5 HOH A 212 1012 216 HOH HOH . E 5 HOH A 213 1013 217 HOH HOH . E 5 HOH A 214 1014 218 HOH HOH . E 5 HOH A 215 1015 219 HOH HOH . E 5 HOH A 216 1016 220 HOH HOH . E 5 HOH A 217 1017 221 HOH HOH . E 5 HOH A 218 1018 222 HOH HOH . E 5 HOH A 219 1019 223 HOH HOH . E 5 HOH A 220 1020 225 HOH HOH . E 5 HOH A 221 1021 227 HOH HOH . E 5 HOH A 222 1022 228 HOH HOH . E 5 HOH A 223 1023 229 HOH HOH . E 5 HOH A 224 1024 230 HOH HOH . E 5 HOH A 225 1025 231 HOH HOH . E 5 HOH A 226 1026 232 HOH HOH . E 5 HOH A 227 1027 233 HOH HOH . E 5 HOH A 228 1028 234 HOH HOH . E 5 HOH A 229 1029 235 HOH HOH . E 5 HOH A 230 1030 236 HOH HOH . E 5 HOH A 231 1031 237 HOH HOH . E 5 HOH A 232 1032 239 HOH HOH . E 5 HOH A 233 1033 243 HOH HOH . E 5 HOH A 234 1034 245 HOH HOH . E 5 HOH A 235 1035 246 HOH HOH . E 5 HOH A 236 1036 247 HOH HOH . E 5 HOH A 237 1037 248 HOH HOH . E 5 HOH A 238 1038 249 HOH HOH . E 5 HOH A 239 1039 250 HOH HOH . E 5 HOH A 240 1040 251 HOH HOH . E 5 HOH A 241 1041 252 HOH HOH . E 5 HOH A 242 1042 253 HOH HOH . E 5 HOH A 243 1043 254 HOH HOH . E 5 HOH A 244 1044 255 HOH HOH . E 5 HOH A 245 1045 256 HOH HOH . E 5 HOH A 246 1046 257 HOH HOH . E 5 HOH A 247 1047 259 HOH HOH . E 5 HOH A 248 1048 260 HOH HOH . E 5 HOH A 249 1049 262 HOH HOH . E 5 HOH A 250 1050 263 HOH HOH . E 5 HOH A 251 1051 264 HOH HOH . E 5 HOH A 252 1052 265 HOH HOH . E 5 HOH A 253 1053 266 HOH HOH . E 5 HOH A 254 1054 267 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 -20.289 13.364 29.03 1 39.37 ? C1 EDO 703 A 1 HETATM 2 O O1 EDO . . . D 4 -20.331 14.537 29.849 1 39.71 ? O1 EDO 703 A 1 HETATM 3 C C2 EDO . . . D 4 -19.414 12.292 29.694 1 40.51 ? C2 EDO 703 A 1 HETATM 4 O O2 EDO . . . D 4 -18.22 12.853 30.27 1 38.48 ? O2 EDO 703 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #