data_4EMA # _model_server_result.job_id qkROuCZTuXbRXvM1neV8VA _model_server_result.datetime_utc '2024-11-19 07:30:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ema # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4EMA # _exptl.entry_id 4EMA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.427 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,4-THIAZOLIDIINEDIONE,5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.7 _cell.angle_gamma 90 _cell.entry_id 4EMA _cell.length_a 90.511 _cell.length_b 61.958 _cell.length_c 117.601 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EMA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 A,C,D 3 1 B,E 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 45.2555 30.979 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H19 N3 O3 S' _chem_comp.formula_weight 357.427 _chem_comp.id BRL _chem_comp.mon_nstd_flag . _chem_comp.name '2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BRL49653;ROSIGLITAZONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C2 BRL sing 70 n n S1 C5 BRL sing 71 n n O2 C2 BRL doub 72 n n O4 C4 BRL doub 73 n n O13 C10 BRL sing 74 n n O13 C14 BRL sing 75 n n N3 C2 BRL sing 76 n n N3 C4 BRL sing 77 n n N3 HN3 BRL sing 78 n n N16 C15 BRL sing 79 n n N16 C16 BRL sing 80 n n N16 C17 BRL sing 81 n n N18 C17 BRL doub 82 n y N18 C19 BRL sing 83 n y C4 C5 BRL sing 84 n n C5 C6 BRL sing 85 n n C5 H5 BRL sing 86 n n C6 C7 BRL sing 87 n n C6 H61 BRL sing 88 n n C6 H62 BRL sing 89 n n C7 C8 BRL doub 90 n y C7 C12 BRL sing 91 n y C8 C9 BRL sing 92 n y C8 H8 BRL sing 93 n n C9 C10 BRL doub 94 n y C9 H9 BRL sing 95 n n C10 C11 BRL sing 96 n y C11 C12 BRL doub 97 n y C11 H11 BRL sing 98 n n C12 H12 BRL sing 99 n n C14 C15 BRL sing 100 n n C14 H141 BRL sing 101 n n C14 H142 BRL sing 102 n n C15 H151 BRL sing 103 n n C15 H152 BRL sing 104 n n C16 H161 BRL sing 105 n n C16 H162 BRL sing 106 n n C16 H163 BRL sing 107 n n C17 C22 BRL sing 108 n y C19 C20 BRL doub 109 n y C19 H19 BRL sing 110 n n C20 C21 BRL sing 111 n y C20 H20 BRL sing 112 n n C21 C22 BRL doub 113 n y C21 H21 BRL sing 114 n n C22 H22 BRL sing 115 n n # _atom_sites.entry_id 4EMA _atom_sites.fract_transf_matrix[1][1] 0.011048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002088 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BRL A 1 601 601 BRL BRL . D 3 HOH A 1 701 1 HOH HOH . D 3 HOH A 2 702 2 HOH HOH . D 3 HOH A 3 703 3 HOH HOH . D 3 HOH A 4 704 5 HOH HOH . D 3 HOH A 5 705 6 HOH HOH . D 3 HOH A 6 706 7 HOH HOH . D 3 HOH A 7 707 10 HOH HOH . D 3 HOH A 8 708 11 HOH HOH . D 3 HOH A 9 709 12 HOH HOH . D 3 HOH A 10 710 13 HOH HOH . D 3 HOH A 11 711 14 HOH HOH . D 3 HOH A 12 712 15 HOH HOH . D 3 HOH A 13 713 16 HOH HOH . D 3 HOH A 14 714 17 HOH HOH . D 3 HOH A 15 715 20 HOH HOH . D 3 HOH A 16 716 21 HOH HOH . D 3 HOH A 17 717 23 HOH HOH . D 3 HOH A 18 718 24 HOH HOH . D 3 HOH A 19 719 25 HOH HOH . D 3 HOH A 20 720 26 HOH HOH . D 3 HOH A 21 721 28 HOH HOH . D 3 HOH A 22 722 29 HOH HOH . D 3 HOH A 23 723 30 HOH HOH . D 3 HOH A 24 724 33 HOH HOH . D 3 HOH A 25 725 34 HOH HOH . D 3 HOH A 26 726 36 HOH HOH . D 3 HOH A 27 727 43 HOH HOH . D 3 HOH A 28 728 51 HOH HOH . D 3 HOH A 29 729 53 HOH HOH . D 3 HOH A 30 730 55 HOH HOH . D 3 HOH A 31 731 56 HOH HOH . D 3 HOH A 32 732 57 HOH HOH . D 3 HOH A 33 733 59 HOH HOH . D 3 HOH A 34 734 60 HOH HOH . D 3 HOH A 35 735 62 HOH HOH . D 3 HOH A 36 736 63 HOH HOH . D 3 HOH A 37 737 64 HOH HOH . D 3 HOH A 38 738 66 HOH HOH . D 3 HOH A 39 739 67 HOH HOH . D 3 HOH A 40 740 69 HOH HOH . D 3 HOH A 41 741 70 HOH HOH . D 3 HOH A 42 742 71 HOH HOH . D 3 HOH A 43 743 72 HOH HOH . E 3 HOH B 1 501 4 HOH HOH . E 3 HOH B 2 502 8 HOH HOH . E 3 HOH B 3 503 9 HOH HOH . E 3 HOH B 4 504 18 HOH HOH . E 3 HOH B 5 505 19 HOH HOH . E 3 HOH B 6 506 22 HOH HOH . E 3 HOH B 7 507 27 HOH HOH . E 3 HOH B 8 508 31 HOH HOH . E 3 HOH B 9 509 32 HOH HOH . E 3 HOH B 10 510 35 HOH HOH . E 3 HOH B 11 511 37 HOH HOH . E 3 HOH B 12 512 38 HOH HOH . E 3 HOH B 13 513 39 HOH HOH . E 3 HOH B 14 514 40 HOH HOH . E 3 HOH B 15 515 41 HOH HOH . E 3 HOH B 16 516 42 HOH HOH . E 3 HOH B 17 517 44 HOH HOH . E 3 HOH B 18 518 45 HOH HOH . E 3 HOH B 19 519 46 HOH HOH . E 3 HOH B 20 520 47 HOH HOH . E 3 HOH B 21 521 48 HOH HOH . E 3 HOH B 22 522 49 HOH HOH . E 3 HOH B 23 523 50 HOH HOH . E 3 HOH B 24 524 52 HOH HOH . E 3 HOH B 25 525 54 HOH HOH . E 3 HOH B 26 526 58 HOH HOH . E 3 HOH B 27 527 61 HOH HOH . E 3 HOH B 28 528 65 HOH HOH . E 3 HOH B 29 529 68 HOH HOH . E 3 HOH B 30 530 73 HOH HOH . E 3 HOH B 31 531 74 HOH HOH . E 3 HOH B 32 532 75 HOH HOH . E 3 HOH B 33 533 76 HOH HOH . E 3 HOH B 34 534 77 HOH HOH . E 3 HOH B 35 535 78 HOH HOH . E 3 HOH B 36 536 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 BRL . . . C 2 12.552 7.638 40.937 1 84.79 ? S1 BRL 601 A 1 HETATM 2 O O2 BRL . . . C 2 10.884 8.268 39.12 1 81.49 ? O2 BRL 601 A 1 HETATM 3 O O4 BRL . . . C 2 15.089 7.102 38.297 1 83.49 ? O4 BRL 601 A 1 HETATM 4 O O13 BRL . . . C 2 15.448 5.086 46.309 1 59.26 ? O13 BRL 601 A 1 HETATM 5 N N3 BRL . . . C 2 12.962 7.685 38.509 1 85 ? N3 BRL 601 A 1 HETATM 6 N N16 BRL . . . C 2 15.373 6.731 48.881 1 62.74 ? N16 BRL 601 A 1 HETATM 7 N N18 BRL . . . C 2 14.704 8.86 49.427 1 67.96 ? N18 BRL 601 A 1 HETATM 8 C C2 BRL . . . C 2 12.011 7.907 39.398 1 84.76 ? C2 BRL 601 A 1 HETATM 9 C C4 BRL . . . C 2 14.132 7.317 39.012 1 82.33 ? C4 BRL 601 A 1 HETATM 10 C C5 BRL . . . C 2 14.222 7.163 40.508 1 76.28 ? C5 BRL 601 A 1 HETATM 11 C C6 BRL . . . C 2 14.535 5.705 40.845 1 67.83 ? C6 BRL 601 A 1 HETATM 12 C C7 BRL . . . C 2 14.814 5.539 42.331 1 64.37 ? C7 BRL 601 A 1 HETATM 13 C C8 BRL . . . C 2 16.035 5.875 42.856 1 56.45 ? C8 BRL 601 A 1 HETATM 14 C C9 BRL . . . C 2 16.254 5.726 44.2 1 57.25 ? C9 BRL 601 A 1 HETATM 15 C C10 BRL . . . C 2 15.254 5.249 45.009 1 60.55 ? C10 BRL 601 A 1 HETATM 16 C C11 BRL . . . C 2 14.04 4.909 44.487 1 61.02 ? C11 BRL 601 A 1 HETATM 17 C C12 BRL . . . C 2 13.816 5.056 43.147 1 64.68 ? C12 BRL 601 A 1 HETATM 18 C C14 BRL . . . C 2 16.38 5.967 46.767 1 59.83 ? C14 BRL 601 A 1 HETATM 19 C C15 BRL . . . C 2 16.4 5.893 48.285 1 60.06 ? C15 BRL 601 A 1 HETATM 20 C C16 BRL . . . C 2 14.113 6.216 49.413 1 52.84 ? C16 BRL 601 A 1 HETATM 21 C C17 BRL . . . C 2 15.62 8.02 48.962 1 68.27 ? C17 BRL 601 A 1 HETATM 22 C C19 BRL . . . C 2 14.917 10.14 49.522 1 61.76 ? C19 BRL 601 A 1 HETATM 23 C C20 BRL . . . C 2 16.119 10.669 49.141 1 64.19 ? C20 BRL 601 A 1 HETATM 24 C C21 BRL . . . C 2 17.096 9.836 48.659 1 66.94 ? C21 BRL 601 A 1 HETATM 25 C C22 BRL . . . C 2 16.84 8.493 48.567 1 67.23 ? C22 BRL 601 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #