data_4EMT # _model_server_result.job_id QbAChGUswT2u-J4VimGYSg _model_server_result.datetime_utc '2024-10-15 18:29:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4emt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4EMT # _exptl.entry_id 4EMT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EMT _cell.length_a 69.797 _cell.length_b 78.215 _cell.length_c 128.222 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_756 -x+2,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 139.594 0 192.333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 60 A SER 213 1_555 A N MSE 61 A MSE 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 61 A MSE 214 1_555 A N ALA 62 A ALA 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 117 A ALA 270 1_555 A N MSE 118 A MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 118 A MSE 271 1_555 A N SER 119 A SER 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 B C SER 60 B SER 213 1_555 B N MSE 61 B MSE 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 B C MSE 61 B MSE 214 1_555 B N ALA 62 B ALA 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C ALA 117 B ALA 270 1_555 B N MSE 118 B MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 B C MSE 118 B MSE 271 1_555 B N SER 119 B SER 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 D CA CA . B CA 401 1_555 F O HOH . B HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc2 B O ALA 165 B ALA 318 1_555 D CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc3 B OD1 ASP 167 B ASP 320 1_555 D CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EMT _atom_sites.fract_transf_matrix[1][1] 0.014327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007799 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C2E A 1 401 1 C2E C2E . D 3 CA B 1 401 1 CA CA . E 4 HOH A 1 501 6 HOH HOH . E 4 HOH A 2 502 11 HOH HOH . E 4 HOH A 3 503 12 HOH HOH . E 4 HOH A 4 504 14 HOH HOH . E 4 HOH A 5 505 16 HOH HOH . E 4 HOH A 6 506 23 HOH HOH . E 4 HOH A 7 507 25 HOH HOH . E 4 HOH A 8 508 26 HOH HOH . E 4 HOH A 9 509 27 HOH HOH . E 4 HOH A 10 510 28 HOH HOH . E 4 HOH A 11 511 30 HOH HOH . E 4 HOH A 12 512 31 HOH HOH . E 4 HOH A 13 513 32 HOH HOH . E 4 HOH A 14 514 33 HOH HOH . E 4 HOH A 15 515 35 HOH HOH . E 4 HOH A 16 516 37 HOH HOH . E 4 HOH A 17 517 38 HOH HOH . E 4 HOH A 18 518 41 HOH HOH . E 4 HOH A 19 519 46 HOH HOH . E 4 HOH A 20 520 47 HOH HOH . E 4 HOH A 21 521 52 HOH HOH . E 4 HOH A 22 522 53 HOH HOH . E 4 HOH A 23 523 55 HOH HOH . E 4 HOH A 24 524 59 HOH HOH . E 4 HOH A 25 525 60 HOH HOH . E 4 HOH A 26 526 68 HOH HOH . E 4 HOH A 27 527 72 HOH HOH . E 4 HOH A 28 528 73 HOH HOH . E 4 HOH A 29 529 77 HOH HOH . E 4 HOH A 30 530 79 HOH HOH . E 4 HOH A 31 531 80 HOH HOH . E 4 HOH A 32 532 81 HOH HOH . E 4 HOH A 33 533 83 HOH HOH . E 4 HOH A 34 534 84 HOH HOH . E 4 HOH A 35 535 88 HOH HOH . E 4 HOH A 36 536 91 HOH HOH . E 4 HOH A 37 537 92 HOH HOH . E 4 HOH A 38 538 93 HOH HOH . E 4 HOH A 39 539 95 HOH HOH . E 4 HOH A 40 540 96 HOH HOH . E 4 HOH A 41 541 97 HOH HOH . E 4 HOH A 42 542 99 HOH HOH . E 4 HOH A 43 543 100 HOH HOH . E 4 HOH A 44 544 105 HOH HOH . E 4 HOH A 45 545 106 HOH HOH . E 4 HOH A 46 546 110 HOH HOH . E 4 HOH A 47 547 113 HOH HOH . E 4 HOH A 48 548 114 HOH HOH . E 4 HOH A 49 549 116 HOH HOH . E 4 HOH A 50 550 117 HOH HOH . E 4 HOH A 51 551 118 HOH HOH . E 4 HOH A 52 552 119 HOH HOH . E 4 HOH A 53 553 120 HOH HOH . E 4 HOH A 54 554 123 HOH HOH . E 4 HOH A 55 555 130 HOH HOH . E 4 HOH A 56 556 132 HOH HOH . E 4 HOH A 57 557 135 HOH HOH . E 4 HOH A 58 558 137 HOH HOH . E 4 HOH A 59 559 140 HOH HOH . E 4 HOH A 60 560 141 HOH HOH . E 4 HOH A 61 561 142 HOH HOH . E 4 HOH A 62 562 143 HOH HOH . E 4 HOH A 63 563 147 HOH HOH . E 4 HOH A 64 564 148 HOH HOH . E 4 HOH A 65 565 149 HOH HOH . E 4 HOH A 66 566 150 HOH HOH . E 4 HOH A 67 567 151 HOH HOH . E 4 HOH A 68 568 152 HOH HOH . E 4 HOH A 69 569 153 HOH HOH . E 4 HOH A 70 570 154 HOH HOH . E 4 HOH A 71 571 161 HOH HOH . E 4 HOH A 72 572 164 HOH HOH . E 4 HOH A 73 573 166 HOH HOH . E 4 HOH A 74 574 168 HOH HOH . E 4 HOH A 75 575 169 HOH HOH . E 4 HOH A 76 576 174 HOH HOH . E 4 HOH A 77 577 178 HOH HOH . E 4 HOH A 78 578 180 HOH HOH . E 4 HOH A 79 579 183 HOH HOH . E 4 HOH A 80 580 184 HOH HOH . E 4 HOH A 81 581 185 HOH HOH . E 4 HOH A 82 582 187 HOH HOH . E 4 HOH A 83 583 189 HOH HOH . E 4 HOH A 84 584 191 HOH HOH . E 4 HOH A 85 585 192 HOH HOH . E 4 HOH A 86 586 193 HOH HOH . E 4 HOH A 87 587 194 HOH HOH . E 4 HOH A 88 588 198 HOH HOH . E 4 HOH A 89 589 202 HOH HOH . E 4 HOH A 90 590 203 HOH HOH . E 4 HOH A 91 591 207 HOH HOH . E 4 HOH A 92 592 209 HOH HOH . E 4 HOH A 93 593 210 HOH HOH . E 4 HOH A 94 594 211 HOH HOH . E 4 HOH A 95 595 213 HOH HOH . E 4 HOH A 96 596 214 HOH HOH . E 4 HOH A 97 597 215 HOH HOH . E 4 HOH A 98 598 216 HOH HOH . E 4 HOH A 99 599 217 HOH HOH . E 4 HOH A 100 600 218 HOH HOH . E 4 HOH A 101 601 220 HOH HOH . E 4 HOH A 102 602 222 HOH HOH . E 4 HOH A 103 603 223 HOH HOH . E 4 HOH A 104 604 226 HOH HOH . E 4 HOH A 105 605 228 HOH HOH . E 4 HOH A 106 606 229 HOH HOH . E 4 HOH A 107 607 233 HOH HOH . E 4 HOH A 108 608 236 HOH HOH . E 4 HOH A 109 609 237 HOH HOH . E 4 HOH A 110 610 238 HOH HOH . E 4 HOH A 111 611 240 HOH HOH . E 4 HOH A 112 612 247 HOH HOH . E 4 HOH A 113 613 253 HOH HOH . E 4 HOH A 114 614 259 HOH HOH . E 4 HOH A 115 615 260 HOH HOH . E 4 HOH A 116 616 264 HOH HOH . E 4 HOH A 117 617 274 HOH HOH . E 4 HOH A 118 618 276 HOH HOH . E 4 HOH A 119 619 277 HOH HOH . E 4 HOH A 120 620 4 HOH HOH . F 4 HOH B 1 501 1 HOH HOH . F 4 HOH B 2 502 2 HOH HOH . F 4 HOH B 3 503 3 HOH HOH . F 4 HOH B 4 504 5 HOH HOH . F 4 HOH B 5 505 7 HOH HOH . F 4 HOH B 6 506 8 HOH HOH . F 4 HOH B 7 507 9 HOH HOH . F 4 HOH B 8 508 10 HOH HOH . F 4 HOH B 9 509 13 HOH HOH . F 4 HOH B 10 510 15 HOH HOH . F 4 HOH B 11 511 17 HOH HOH . F 4 HOH B 12 512 18 HOH HOH . F 4 HOH B 13 513 19 HOH HOH . F 4 HOH B 14 514 20 HOH HOH . F 4 HOH B 15 515 21 HOH HOH . F 4 HOH B 16 516 22 HOH HOH . F 4 HOH B 17 517 24 HOH HOH . F 4 HOH B 18 518 29 HOH HOH . F 4 HOH B 19 519 34 HOH HOH . F 4 HOH B 20 520 36 HOH HOH . F 4 HOH B 21 521 39 HOH HOH . F 4 HOH B 22 522 40 HOH HOH . F 4 HOH B 23 523 42 HOH HOH . F 4 HOH B 24 524 43 HOH HOH . F 4 HOH B 25 525 44 HOH HOH . F 4 HOH B 26 526 45 HOH HOH . F 4 HOH B 27 527 48 HOH HOH . F 4 HOH B 28 528 49 HOH HOH . F 4 HOH B 29 529 50 HOH HOH . F 4 HOH B 30 530 51 HOH HOH . F 4 HOH B 31 531 54 HOH HOH . F 4 HOH B 32 532 56 HOH HOH . F 4 HOH B 33 533 57 HOH HOH . F 4 HOH B 34 534 58 HOH HOH . F 4 HOH B 35 535 61 HOH HOH . F 4 HOH B 36 536 62 HOH HOH . F 4 HOH B 37 537 63 HOH HOH . F 4 HOH B 38 538 64 HOH HOH . F 4 HOH B 39 539 65 HOH HOH . F 4 HOH B 40 540 66 HOH HOH . F 4 HOH B 41 541 67 HOH HOH . F 4 HOH B 42 542 69 HOH HOH . F 4 HOH B 43 543 70 HOH HOH . F 4 HOH B 44 544 71 HOH HOH . F 4 HOH B 45 545 74 HOH HOH . F 4 HOH B 46 546 75 HOH HOH . F 4 HOH B 47 547 76 HOH HOH . F 4 HOH B 48 548 78 HOH HOH . F 4 HOH B 49 549 82 HOH HOH . F 4 HOH B 50 550 85 HOH HOH . F 4 HOH B 51 551 86 HOH HOH . F 4 HOH B 52 552 87 HOH HOH . F 4 HOH B 53 553 89 HOH HOH . F 4 HOH B 54 554 90 HOH HOH . F 4 HOH B 55 555 94 HOH HOH . F 4 HOH B 56 556 98 HOH HOH . F 4 HOH B 57 557 101 HOH HOH . F 4 HOH B 58 558 102 HOH HOH . F 4 HOH B 59 559 103 HOH HOH . F 4 HOH B 60 560 104 HOH HOH . F 4 HOH B 61 561 107 HOH HOH . F 4 HOH B 62 562 108 HOH HOH . F 4 HOH B 63 563 109 HOH HOH . F 4 HOH B 64 564 111 HOH HOH . F 4 HOH B 65 565 112 HOH HOH . F 4 HOH B 66 566 115 HOH HOH . F 4 HOH B 67 567 121 HOH HOH . F 4 HOH B 68 568 122 HOH HOH . F 4 HOH B 69 569 124 HOH HOH . F 4 HOH B 70 570 125 HOH HOH . F 4 HOH B 71 571 126 HOH HOH . F 4 HOH B 72 572 127 HOH HOH . F 4 HOH B 73 573 128 HOH HOH . F 4 HOH B 74 574 129 HOH HOH . F 4 HOH B 75 575 131 HOH HOH . F 4 HOH B 76 576 133 HOH HOH . F 4 HOH B 77 577 134 HOH HOH . F 4 HOH B 78 578 136 HOH HOH . F 4 HOH B 79 579 138 HOH HOH . F 4 HOH B 80 580 139 HOH HOH . F 4 HOH B 81 581 144 HOH HOH . F 4 HOH B 82 582 145 HOH HOH . F 4 HOH B 83 583 146 HOH HOH . F 4 HOH B 84 584 155 HOH HOH . F 4 HOH B 85 585 156 HOH HOH . F 4 HOH B 86 586 157 HOH HOH . F 4 HOH B 87 587 158 HOH HOH . F 4 HOH B 88 588 159 HOH HOH . F 4 HOH B 89 589 160 HOH HOH . F 4 HOH B 90 590 162 HOH HOH . F 4 HOH B 91 591 163 HOH HOH . F 4 HOH B 92 592 165 HOH HOH . F 4 HOH B 93 593 167 HOH HOH . F 4 HOH B 94 594 170 HOH HOH . F 4 HOH B 95 595 171 HOH HOH . F 4 HOH B 96 596 172 HOH HOH . F 4 HOH B 97 597 173 HOH HOH . F 4 HOH B 98 598 175 HOH HOH . F 4 HOH B 99 599 176 HOH HOH . F 4 HOH B 100 600 177 HOH HOH . F 4 HOH B 101 601 179 HOH HOH . F 4 HOH B 102 602 181 HOH HOH . F 4 HOH B 103 603 182 HOH HOH . F 4 HOH B 104 604 186 HOH HOH . F 4 HOH B 105 605 188 HOH HOH . F 4 HOH B 106 606 190 HOH HOH . F 4 HOH B 107 607 195 HOH HOH . F 4 HOH B 108 608 196 HOH HOH . F 4 HOH B 109 609 197 HOH HOH . F 4 HOH B 110 610 199 HOH HOH . F 4 HOH B 111 611 200 HOH HOH . F 4 HOH B 112 612 201 HOH HOH . F 4 HOH B 113 613 204 HOH HOH . F 4 HOH B 114 614 205 HOH HOH . F 4 HOH B 115 615 206 HOH HOH . F 4 HOH B 116 616 208 HOH HOH . F 4 HOH B 117 617 212 HOH HOH . F 4 HOH B 118 618 219 HOH HOH . F 4 HOH B 119 619 221 HOH HOH . F 4 HOH B 120 620 224 HOH HOH . F 4 HOH B 121 621 225 HOH HOH . F 4 HOH B 122 622 227 HOH HOH . F 4 HOH B 123 623 230 HOH HOH . F 4 HOH B 124 624 231 HOH HOH . F 4 HOH B 125 625 232 HOH HOH . F 4 HOH B 126 626 234 HOH HOH . F 4 HOH B 127 627 235 HOH HOH . F 4 HOH B 128 628 239 HOH HOH . F 4 HOH B 129 629 241 HOH HOH . F 4 HOH B 130 630 242 HOH HOH . F 4 HOH B 131 631 243 HOH HOH . F 4 HOH B 132 632 244 HOH HOH . F 4 HOH B 133 633 245 HOH HOH . F 4 HOH B 134 634 246 HOH HOH . F 4 HOH B 135 635 248 HOH HOH . F 4 HOH B 136 636 249 HOH HOH . F 4 HOH B 137 637 250 HOH HOH . F 4 HOH B 138 638 251 HOH HOH . F 4 HOH B 139 639 252 HOH HOH . F 4 HOH B 140 640 254 HOH HOH . F 4 HOH B 141 641 255 HOH HOH . F 4 HOH B 142 642 256 HOH HOH . F 4 HOH B 143 643 257 HOH HOH . F 4 HOH B 144 644 258 HOH HOH . F 4 HOH B 145 645 261 HOH HOH . F 4 HOH B 146 646 262 HOH HOH . F 4 HOH B 147 647 263 HOH HOH . F 4 HOH B 148 648 265 HOH HOH . F 4 HOH B 149 649 266 HOH HOH . F 4 HOH B 150 650 267 HOH HOH . F 4 HOH B 151 651 268 HOH HOH . F 4 HOH B 152 652 269 HOH HOH . F 4 HOH B 153 653 270 HOH HOH . F 4 HOH B 154 654 271 HOH HOH . F 4 HOH B 155 655 272 HOH HOH . F 4 HOH B 156 656 273 HOH HOH . F 4 HOH B 157 657 275 HOH HOH . F 4 HOH B 158 658 278 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 73.325 _atom_site.Cartn_y 12.636 _atom_site.Cartn_z 99.26 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #